Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq43 205 1e-48 seq601 104 4e-18 >seq43 Length=477585 Score = 205 bits (226), Expect = 1e-48 Identities = 197/250 (79%), Gaps = 2/250 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| | | ||| |||||| |||||||||||||| ||||| ||||||||||| Sbjct 292338 GCCAAGCGTCACAGAAAGAT-TCTTCGTGATAACATCCAAGGTATCACAAAGCCAGCTAT 292396 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||| |||||||||||||| ||||||||| |||| | || |||| ||||||| Sbjct 292397 CCGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCCGCTATGATCTACGAAGAGAC 292456 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||| | ||| |||||| ||||||| || || |||| ||| ||| || || || || Sbjct 292457 TCGAGGTGTCCTGAAGACCTTCCTCGAGGGTGTCATCCGTGACGCTGTCACATACACTGA 292516 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || |||||||||||||| | ||| ||||||| || | || | ||||| Sbjct 292517 GCACGCCAAGCGCAAGACTGTCACCTCTCTTGATGTCGTCTACGCTCTCAAGAGACAAGG 292576 Query 16672 CCGTAAGATT 16681 ||||||| || Sbjct 292577 CCGTAAGTTT 292586 >seq601 Length=648486 Score = 104 bits (114), Expect = 4e-18 Identities = 84/99 (85%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCG-CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||||| || |||| | | ||||| ||||| || || ||||| ||||| ||||| Sbjct 126265 GCTAAGCGTCACCGAAAGAT-TTTGCGAGACAACATTCAGGGTATCACAAAGCCTGCTAT 126323 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||||||||| |||||||||||||| ||||||||| |||| Sbjct 126324 CCGTCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTC 126362 Score = 89.7 bits (98), Expect = 8e-14 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595 || |||| ||||||| ||||| ||| | ||| ||||||| | |||| || | ||| | Sbjct 126462 TGATCTACGAAGAGACTCGTGGTGTGCTCAAGTCCTTCCTCGAATCCGTCATTCGTGACG 126521 Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655 | || ||| ||||| ||||| || || |||||||||||||| | || | ||||| | Sbjct 126522 CCGTCACCTACACCGAACACGCCAAGCGCAAGACTGTCACCTCTCTTGACGTTGTCTACG 126581 Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | | || || ||||| |||| | || ||||| || ||||| Sbjct 126582 CTCTCAAGCGACAAGGTCGTACCCTCTACGGTTTCGGTGGTTAA 126625 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074558156486