Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015-
05-13] 702 sequences; 27,513,354 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq43 205 1e-48
seq601 104 4e-18
>seq43
Length=477585
Score = 205 bits (226), Expect = 1e-48
Identities = 197/250 (79%), Gaps = 2/250 (1%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| | | ||| |||||| |||||||||||||| ||||| |||||||||||
Sbjct 292338 GCCAAGCGTCACAGAAAGAT-TCTTCGTGATAACATCCAAGGTATCACAAAGCCAGCTAT 292396
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| ||||| |||||||||||||| ||||||||| |||| | || |||| |||||||
Sbjct 292397 CCGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCCGCTATGATCTACGAAGAGAC 292456
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
||| | ||| |||||| ||||||| || || |||| ||| ||| || || || ||
Sbjct 292457 TCGAGGTGTCCTGAAGACCTTCCTCGAGGGTGTCATCCGTGACGCTGTCACATACACTGA 292516
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || || |||||||||||||| | ||| ||||||| || | || | |||||
Sbjct 292517 GCACGCCAAGCGCAAGACTGTCACCTCTCTTGATGTCGTCTACGCTCTCAAGAGACAAGG 292576
Query 16672 CCGTAAGATT 16681
||||||| ||
Sbjct 292577 CCGTAAGTTT 292586
>seq601
Length=648486
Score = 104 bits (114), Expect = 4e-18
Identities = 84/99 (85%), Gaps = 2/99 (2%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCG-CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||||||||||| || |||| | | ||||| ||||| || || ||||| ||||| |||||
Sbjct 126265 GCTAAGCGTCACCGAAAGAT-TTTGCGAGACAACATTCAGGGTATCACAAAGCCTGCTAT 126323
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530
||||||||| |||||||||||||| ||||||||| ||||
Sbjct 126324 CCGTCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTC 126362
Score = 89.7 bits (98), Expect = 8e-14
Identities = 118/164 (72%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595
|| |||| ||||||| ||||| ||| | ||| ||||||| | |||| || | ||| |
Sbjct 126462 TGATCTACGAAGAGACTCGTGGTGTGCTCAAGTCCTTCCTCGAATCCGTCATTCGTGACG 126521
Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655
| || ||| ||||| ||||| || || |||||||||||||| | || | ||||| |
Sbjct 126522 CCGTCACCTACACCGAACACGCCAAGCGCAAGACTGTCACCTCTCTTGACGTTGTCTACG 126581
Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
| | || || ||||| |||| | || ||||| || |||||
Sbjct 126582 CTCTCAAGCGACAAGGTCGTACCCTCTACGGTTTCGGTGGTTAA 126625
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79074558156486
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |