Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq698 223 4e-53 seq689 147 3e-30 >seq698 Length=89367 Score = 223 bits (246), Expect = 4e-53 Identities = 1213/1921 (63%), Gaps = 75/1921 (4%) Strand=Plus/Plus Query 61983 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 62042 |||| ||| | || |||||||| || || | || | | || || |||||||||||| Sbjct 1245 TCCTGGTCGACAGTAAATTGAATTGGTGCAGCAGCAGCCATGGTGCGGAGATAGTACATT 1304 Query 62043 CCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTC 62102 || || || |||||||| |||||||| || ||||| || | |||| | Sbjct 1305 CCAGTCTTGAGACCGAGCTTCCATCCGGCGAAGTGCATGGAAGTGATTTTGCCCATGGTT 1364 Query 62103 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 62162 || || || || || |||| |||||| |||||| ||||| || || | ||| ||| Sbjct 1365 GGCTCCTTCATGTGAATGTTCAATGATTGAGATTGATCAATGAAAGCACCGCGGTCAGCA 1424 Query 62163 GCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATA 62222 ||||||| | || ||| |||||||| | || || || | ||| ||| Sbjct 1425 GCCATTTGAACAATTTGACGTTGGCTTATTTCCCAGACGGTCTTGTATAGAGCCTTGATA 1484 Query 62223 TCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTG 62279 || |||| || | ||| ||||| || |||||| || | ||| || ||||| Sbjct 1485 TCAGTAGGAATATTAGGAATATCTTGAATCGAACCACCAGAAGCGACAATTCTGTTCTTC 1544 Query 62280 ATCTCATCATTCCATAATTTTCTCTCGGTTAAAAC--TC--TAAGGAGATGCGGATTAAC 62335 || | ||| ||||| | |||| | | || | || | | || || || Sbjct 1545 ATGTTATCTGACCATAGAC----CAAGGTTGACAAGATCCTTGAGCAAGTATGGGTTGAC 1600 Query 62336 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCAC 62395 ||||| || ||||||| ||| || | |||| |||||| || || || || || | Sbjct 1601 GACTTGGAACTCTCCAGCCAAGACGCGACGAGAGTAAATGTTTGATGTGTATGGCTCAAA 1660 Query 62396 CGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAA 62455 ||||||| || || | ||| || | ||||| ||||| ||||| || || ||||| | Sbjct 1661 GCACTCATTGTTACCAAGAATCTGCGAGGTTGAAGCAGTAGGCATTGGAGCAACCAAAAG 1720 Query 62456 ACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATC 62515 | || | || ||| | | ||| | | | || || ||||| | ||||||||| Sbjct 1721 AGAGTTGCGAATACCATGCTTGGCGATATCAGCCTTGAGGCTCTCCCAGTCCCAAAGATC 1780 Query 62516 CGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTT----ACTGGCGTACGATC 62571 | || || ||| || || || | ||||| | || Sbjct 1781 AGTTGGCTTGACATTCCACATGTCATATTGAAGGATGCCTTGGGAAACTGGTGAAC---- 1836 Query 62572 CTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCAC 62631 | | ||||| ||||| | ||| | || | ||| || | || | ||| ||| Sbjct 1837 CCGCGTATGTCTCGTAGGTTCCCTGCTCTTGAGCAAGCTGGCAGGACATAGTTAAAGCAG 1896 Query 62632 CGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATG 62691 | | ||| ||||| || ||||||| | || | | | || || | ||||| | Sbjct 1897 CATGATAGATGGTCTCAAAGATCTGAGTGTTCAATTGACGAGCCTCGGGAGAGTCAAAAG 1956 Query 62692 GA-----TAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGG 62746 || |||||| || |||| || || || | || || ||||||| ||| | || Sbjct 1957 GAAGACGTAATTTGAG-GAAT----GCATCTGCGAGACCCTGGACACCAAGACCAACTGG 2011 Query 62747 TCTATGTCTCTTATTAGAGATTTCA-GCTTCTGGAATAGGATAATAATTAATATCTATAA 62805 | ||| | | |||| | || | |||||||| | || ||||| || | ||| || | Sbjct 2012 ACGATGACGCATATT-GCTCTTGCGTGCTTCTGGCACTGGGTAATAGTTGACATCGATGA 2070 Query 62806 TTTTATTGAGATTTC---TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAA 62862 || || | ||| | |||| | | | ||| || | |||| |||||| Sbjct 2071 CCTTGTTCAAATTGCGAGTGACCA---CCTGGACGACCCGGTGGAGTTCCCCAAAATCGT 2127 Query 62863 A-TCGCC-CATCTATTACAAACATGTTC---AAGGCA-ACAGATGCCAGATTACAAACGG 62916 | ||||| | ||| | | |||| | ||| | | || || ||||| ||||| | Sbjct 2128 ACTCGCCACTTCTTTCATCAACAAAGGCTGGAAGAGAGAGGGAAGCGAGATTGCAAACAG 2187 Query 62917 CTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAG 62976 | || |||| | | | | || | || || || || || | ||| | |||||||| Sbjct 2188 CGACTTCATCTGGAGCAGTGTACTCAATAATTTCGGTACACAAGTTAGAGCTCTTGATAG 2247 Query 62977 TTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAG 63036 | || || || | |||||| |||||| ||| || |||||||| || || ||||||||| Sbjct 2248 TACCCAAGTTCTTTTGATTGCTCTTTCGGTTGCAGGCATCCTTGTAGAGCATGAATGGAT 2307 Query 63037 TACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAG 63096 | ||||| || |||| | || | || || | ||| | | |||| || || | Sbjct 2308 TTCCAGTCTCGGTCTGTGCCTCGAGGATAGCGTACCAAAGCTTTTGAGCTTTCAT----G 2363 Query 63097 ATTTGTAT----CTCCTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCC 63152 || || | || ||| ||||||| | ||| | || || || ||||| Sbjct 2364 GTTCGTCGACCACGCCCCTCTTGTTCGTATTTGGCATAAAGGACCTCAAATTCATCTCCA 2423 Query 63153 CAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCC 63212 | || | | | | || ||| |||| || || | ||| | ||||||| | || | Sbjct 2424 TAGACGTCGGCTAGACCTGGAGCCTCATGAGGGCAGAACAAAGTCCACTCT---TGATTC 2480 Query 63213 TTC---ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGT 63268 || |||||||||||||| |||||||||||||||||||| ||| || || || | | Sbjct 2481 TTTTCAACTCGTTTCATAAAAAGATCAGGAATCCAAAGAGC-ATAGAAAAGGTCACGAGC 2539 Query 63269 TCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATG 63328 || ||| || || || ||||| || || ||||| | | || || || || Sbjct 2540 TCGTACTTCTTCCTTGCCGTGGTTCTTGCGGAGGTCAAGGAATTCGAAAACGTCCGAGTG 2599 Query 63329 CCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTA 63388 ||| || || | ||| ||||| | | | || || |||||||| || ||||| || | ||| Sbjct 2600 CCATGGCTCAAGGTAAATGGCAAAAGCACCTGGTCGTTTGTTGCCACCCTGGTCAACGTA 2659 Query 63389 TCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGT 63448 |||||| ||||| || | || | | ||| |||| ||||||||| || |||||| || Sbjct 2660 TCTAGCAGTGTTGTTGAACACGCGGAGCATGGGAACAATACCGTTGGAAGAACCATTAGT 2719 Query 63449 ACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGC 63508 ||| || || ||| |||| ||||| | ||| ||||| || || || || Sbjct 2720 CCCGCCAATGTAAGAGCCAGTGGCTCGAATTCTGTGAATGTTGAGACCGATACCACCGGC 2779 Query 63509 CATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATC 63568 | || ||||| | || || || || || |||||||| || || || || || || Sbjct 2780 GGTCTTGGAGATCATGGCACAAGTCTTCAAAGTATCATAGATTCCTTCGATACTGTCCTC 2839 Query 63569 GATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAA 63628 |||||| | | || || ||||| || | || ||| || ||||| || | Sbjct 2840 TTTCATGTCGATCAAGAAGCATGAGGACATCTGAGGCTGAGGAGTACCAGCATTGAAAAG 2899 Query 63629 GGTAGGAGAAGCGTGCGTAAACCATTTTTCA--GAAAGTAGATTGTACGTCT-CAATA-- 63683 ||| || |||||||| || || | |||| || | || ||||| || | ||| | Sbjct 2900 GGTTGGGGAAGCGTGGGTGAA--TGTCTTCAACGACAAAAGCTTGTAGGTTTCCAAGACA 2957 Query 63684 -GCTGA--GTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGA 63740 | | | ||| | |||| || || || || |||||||| | |||||| || Sbjct 2958 CGTTCAATGTCATCACCCCA------GATACCAACAGCAACACGCATCAGCATGTGTTGT 3011 Query 63741 GGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAA 63800 |||| ||| | |||||| || || | | ||| ||| |||||| || || ||| Sbjct 3012 GGTCGCTCAGCTGGCTTGTTACCAATCTTGAGTAGGTATGATCTTTCCATTGTCTTGAAA 3071 Query 63801 CCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTA 63860 |||||||| | || |||||||| ||||| | ||| ||||||||| || ||||| | Sbjct 3072 CCAAAATATTGATAGTTAAAGTCTCTGTCGTAGACGATAGCCGAGTTGAATTCATCCTCA 3131 Query 63861 T 63861 | Sbjct 3132 T 3132 >seq689 Length=208963 Score = 147 bits (162), Expect = 3e-30 Identities = 550/853 (64%), Gaps = 16/853 (2%) Strand=Plus/Plus Query 33013 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33072 |||||||| ||||| ||||| || || || || || || ||||| | | || || ||| Sbjct 93919 TTTTGGTAATCACCAACACGCTTCTCAAAGAAGTTTGTCTTTCCAGCAAGGGAGATGTTT 93978 Query 33073 TCCATGAAATCAAACGGATTGGTAACATTATA-AAttttt--ttAAATCCCAATTCAGAA 33129 |||||||| || || || ||||| || || || || | ||| || | | Sbjct 93979 TCCATGAAGTCGAATGGGTTGGTGGAGTTGTAGAACTTCTGGTTA---CCGAGAGCGATG 94035 Query 33130 ATCAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATA 33189 | | ||| || || || || || || ||| ||||| | | ||||| || | Sbjct 94036 AGGAGTCTGTCGGCAACAAACTCGATGTATTGCTTCATGAGAGTAGCGTTCATGCCGAGG 94095 Query 33190 AGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATA 33249 || | ||||||||| |||| | ||||||||||| || || || || || ||| Sbjct 94096 AGACCACATGGAAGAGCATCAGTCAAGAATTCTTGTTCGATTTCAACAGCCTCGGTGATA 94155 Query 33250 ATAGATCTAACGGT-TTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGC 33308 || | | | |||||| | || || || | | || || | | || || Sbjct 94156 ATGTCTTGGATGACCTTCTTCGATGGGCGGTTGTTA-AGGTGAGAGAAGAGGAGGCAGGC 94214 Query 33309 GAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGG 33368 ||||| |||||||||||| || | | || | |||||| || || || || || || Sbjct 94215 AAAATCAGTGTGCAGACCCTCATCACGAGAGATCAATTCGTTAGAGAATGTAAGACCCGG 94274 Query 33369 CATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCC 33428 ||| | || ||||| || | ||| || ||||| || || || || || |||||||| || Sbjct 94275 CATCATACCGCGCTTCTTCAACCAGAAGATGGATGCAAAAGAACCCGAGAAGAAGATACC 94334 Query 33429 TTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGTCATGTATCCA 33485 || || |||||||| |||| || | | | ||| | | ||| || ||||| Sbjct 94335 CTCAACCGCAGCAAAAGCAACGAGACGTTGAGCGAAACAAGATTCTTGGTCTTGAATCCA 94394 Query 33486 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAG 33545 | ||||||||||||||||| | ||| || || || || ||||||| || | Sbjct 94395 GTGAATGGCCCAATCGGCCTTCTTGCGGATACATGGGATGGTATCAATGGCATCGAACAA 94454 Query 33546 ATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGA 33605 || || | | || || |||| || || ||||| | |||| || | || || Sbjct 94455 GTATGTTCTCTGCTTTGGCTCCTTAATGTATGTGTCGATGAGAAGAGAGTATGTCTCTGA 94514 Query 33606 ATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTAC 33665 || ||||| || || ||||| || |||||||| |||| || || | | ||| || Sbjct 94515 GTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGTGCTTCTGGGACCTGAAC 94574 Query 33666 TTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAA 33725 ||| | | || ||||| |||| || |||||||| || || || || ||||| || Sbjct 94575 TTCACCAGAGAAACGTTCGACCAAGTTCTCATTCACAATACCATCTGAAGCGGCAAAGAA 94634 Query 33726 CGCCAATACATGTTTTATAAAATA---TTTTTCGTC-TGGTGTTAGTTTATTCCAATCAT 33781 || | ||||| || || || | ||||| | | | | || ||||| || | Sbjct 94635 GGCAAGAACATGGGAGATGAAGTAGCGCTCATCGTCATTGAG-GCGATTGTTCCAGTCGT 94693 Query 33782 TGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTAT 33841 | ||| || || | ||| | ||||| | ||||| ||||| || || ||||| || | Sbjct 94694 GAAGATCCTTTGACAGATCGATCTCTTCGGCAGTCCAGAATGAGGCTTCAGCCTTCTTGT 94753 Query 33842 ACATGTTCCAGAT 33854 |||| | |||||| Sbjct 94754 ACATTTGCCAGAT 94766 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622941733638320