Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015-
05-13] 702 sequences; 27,513,354 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq698 223 4e-53
seq689 147 3e-30
>seq698
Length=89367
Score = 223 bits (246), Expect = 4e-53
Identities = 1213/1921 (63%), Gaps = 75/1921 (4%)
Strand=Plus/Plus
Query 61983 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 62042
|||| ||| | || |||||||| || || | || | | || || ||||||||||||
Sbjct 1245 TCCTGGTCGACAGTAAATTGAATTGGTGCAGCAGCAGCCATGGTGCGGAGATAGTACATT 1304
Query 62043 CCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTC 62102
|| || || |||||||| |||||||| || ||||| || | |||| |
Sbjct 1305 CCAGTCTTGAGACCGAGCTTCCATCCGGCGAAGTGCATGGAAGTGATTTTGCCCATGGTT 1364
Query 62103 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 62162
|| || || || || |||| |||||| |||||| ||||| || || | ||| |||
Sbjct 1365 GGCTCCTTCATGTGAATGTTCAATGATTGAGATTGATCAATGAAAGCACCGCGGTCAGCA 1424
Query 62163 GCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATA 62222
||||||| | || ||| |||||||| | || || || | ||| |||
Sbjct 1425 GCCATTTGAACAATTTGACGTTGGCTTATTTCCCAGACGGTCTTGTATAGAGCCTTGATA 1484
Query 62223 TCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTG 62279
|| |||| || | ||| ||||| || |||||| || | ||| || |||||
Sbjct 1485 TCAGTAGGAATATTAGGAATATCTTGAATCGAACCACCAGAAGCGACAATTCTGTTCTTC 1544
Query 62280 ATCTCATCATTCCATAATTTTCTCTCGGTTAAAAC--TC--TAAGGAGATGCGGATTAAC 62335
|| | ||| ||||| | |||| | | || | || | | || || ||
Sbjct 1545 ATGTTATCTGACCATAGAC----CAAGGTTGACAAGATCCTTGAGCAAGTATGGGTTGAC 1600
Query 62336 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCAC 62395
||||| || ||||||| ||| || | |||| |||||| || || || || || |
Sbjct 1601 GACTTGGAACTCTCCAGCCAAGACGCGACGAGAGTAAATGTTTGATGTGTATGGCTCAAA 1660
Query 62396 CGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAA 62455
||||||| || || | ||| || | ||||| ||||| ||||| || || ||||| |
Sbjct 1661 GCACTCATTGTTACCAAGAATCTGCGAGGTTGAAGCAGTAGGCATTGGAGCAACCAAAAG 1720
Query 62456 ACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATC 62515
| || | || ||| | | ||| | | | || || ||||| | |||||||||
Sbjct 1721 AGAGTTGCGAATACCATGCTTGGCGATATCAGCCTTGAGGCTCTCCCAGTCCCAAAGATC 1780
Query 62516 CGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTT----ACTGGCGTACGATC 62571
| || || ||| || || || | ||||| | ||
Sbjct 1781 AGTTGGCTTGACATTCCACATGTCATATTGAAGGATGCCTTGGGAAACTGGTGAAC---- 1836
Query 62572 CTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCAC 62631
| | ||||| ||||| | ||| | || | ||| || | || | ||| |||
Sbjct 1837 CCGCGTATGTCTCGTAGGTTCCCTGCTCTTGAGCAAGCTGGCAGGACATAGTTAAAGCAG 1896
Query 62632 CGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATG 62691
| | ||| ||||| || ||||||| | || | | | || || | ||||| |
Sbjct 1897 CATGATAGATGGTCTCAAAGATCTGAGTGTTCAATTGACGAGCCTCGGGAGAGTCAAAAG 1956
Query 62692 GA-----TAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGG 62746
|| |||||| || |||| || || || | || || ||||||| ||| | ||
Sbjct 1957 GAAGACGTAATTTGAG-GAAT----GCATCTGCGAGACCCTGGACACCAAGACCAACTGG 2011
Query 62747 TCTATGTCTCTTATTAGAGATTTCA-GCTTCTGGAATAGGATAATAATTAATATCTATAA 62805
| ||| | | |||| | || | |||||||| | || ||||| || | ||| || |
Sbjct 2012 ACGATGACGCATATT-GCTCTTGCGTGCTTCTGGCACTGGGTAATAGTTGACATCGATGA 2070
Query 62806 TTTTATTGAGATTTC---TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAA 62862
|| || | ||| | |||| | | | ||| || | |||| ||||||
Sbjct 2071 CCTTGTTCAAATTGCGAGTGACCA---CCTGGACGACCCGGTGGAGTTCCCCAAAATCGT 2127
Query 62863 A-TCGCC-CATCTATTACAAACATGTTC---AAGGCA-ACAGATGCCAGATTACAAACGG 62916
| ||||| | ||| | | |||| | ||| | | || || ||||| ||||| |
Sbjct 2128 ACTCGCCACTTCTTTCATCAACAAAGGCTGGAAGAGAGAGGGAAGCGAGATTGCAAACAG 2187
Query 62917 CTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAG 62976
| || |||| | | | | || | || || || || || | ||| | ||||||||
Sbjct 2188 CGACTTCATCTGGAGCAGTGTACTCAATAATTTCGGTACACAAGTTAGAGCTCTTGATAG 2247
Query 62977 TTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAG 63036
| || || || | |||||| |||||| ||| || |||||||| || || |||||||||
Sbjct 2248 TACCCAAGTTCTTTTGATTGCTCTTTCGGTTGCAGGCATCCTTGTAGAGCATGAATGGAT 2307
Query 63037 TACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAG 63096
| ||||| || |||| | || | || || | ||| | | |||| || || |
Sbjct 2308 TTCCAGTCTCGGTCTGTGCCTCGAGGATAGCGTACCAAAGCTTTTGAGCTTTCAT----G 2363
Query 63097 ATTTGTAT----CTCCTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCC 63152
|| || | || ||| ||||||| | ||| | || || || |||||
Sbjct 2364 GTTCGTCGACCACGCCCCTCTTGTTCGTATTTGGCATAAAGGACCTCAAATTCATCTCCA 2423
Query 63153 CAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCC 63212
| || | | | | || ||| |||| || || | ||| | ||||||| | || |
Sbjct 2424 TAGACGTCGGCTAGACCTGGAGCCTCATGAGGGCAGAACAAAGTCCACTCT---TGATTC 2480
Query 63213 TTC---ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGT 63268
|| |||||||||||||| |||||||||||||||||||| ||| || || || | |
Sbjct 2481 TTTTCAACTCGTTTCATAAAAAGATCAGGAATCCAAAGAGC-ATAGAAAAGGTCACGAGC 2539
Query 63269 TCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATG 63328
|| ||| || || || ||||| || || ||||| | | || || || ||
Sbjct 2540 TCGTACTTCTTCCTTGCCGTGGTTCTTGCGGAGGTCAAGGAATTCGAAAACGTCCGAGTG 2599
Query 63329 CCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTA 63388
||| || || | ||| ||||| | | | || || |||||||| || ||||| || | |||
Sbjct 2600 CCATGGCTCAAGGTAAATGGCAAAAGCACCTGGTCGTTTGTTGCCACCCTGGTCAACGTA 2659
Query 63389 TCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGT 63448
|||||| ||||| || | || | | ||| |||| ||||||||| || |||||| ||
Sbjct 2660 TCTAGCAGTGTTGTTGAACACGCGGAGCATGGGAACAATACCGTTGGAAGAACCATTAGT 2719
Query 63449 ACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGC 63508
||| || || ||| |||| ||||| | ||| ||||| || || || ||
Sbjct 2720 CCCGCCAATGTAAGAGCCAGTGGCTCGAATTCTGTGAATGTTGAGACCGATACCACCGGC 2779
Query 63509 CATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATC 63568
| || ||||| | || || || || || |||||||| || || || || || ||
Sbjct 2780 GGTCTTGGAGATCATGGCACAAGTCTTCAAAGTATCATAGATTCCTTCGATACTGTCCTC 2839
Query 63569 GATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAA 63628
|||||| | | || || ||||| || | || ||| || ||||| || |
Sbjct 2840 TTTCATGTCGATCAAGAAGCATGAGGACATCTGAGGCTGAGGAGTACCAGCATTGAAAAG 2899
Query 63629 GGTAGGAGAAGCGTGCGTAAACCATTTTTCA--GAAAGTAGATTGTACGTCT-CAATA-- 63683
||| || |||||||| || || | |||| || | || ||||| || | ||| |
Sbjct 2900 GGTTGGGGAAGCGTGGGTGAA--TGTCTTCAACGACAAAAGCTTGTAGGTTTCCAAGACA 2957
Query 63684 -GCTGA--GTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGA 63740
| | | ||| | |||| || || || || |||||||| | |||||| ||
Sbjct 2958 CGTTCAATGTCATCACCCCA------GATACCAACAGCAACACGCATCAGCATGTGTTGT 3011
Query 63741 GGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAA 63800
|||| ||| | |||||| || || | | ||| ||| |||||| || || |||
Sbjct 3012 GGTCGCTCAGCTGGCTTGTTACCAATCTTGAGTAGGTATGATCTTTCCATTGTCTTGAAA 3071
Query 63801 CCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTA 63860
|||||||| | || |||||||| ||||| | ||| ||||||||| || ||||| |
Sbjct 3072 CCAAAATATTGATAGTTAAAGTCTCTGTCGTAGACGATAGCCGAGTTGAATTCATCCTCA 3131
Query 63861 T 63861
|
Sbjct 3132 T 3132
>seq689
Length=208963
Score = 147 bits (162), Expect = 3e-30
Identities = 550/853 (64%), Gaps = 16/853 (2%)
Strand=Plus/Plus
Query 33013 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33072
|||||||| ||||| ||||| || || || || || || ||||| | | || || |||
Sbjct 93919 TTTTGGTAATCACCAACACGCTTCTCAAAGAAGTTTGTCTTTCCAGCAAGGGAGATGTTT 93978
Query 33073 TCCATGAAATCAAACGGATTGGTAACATTATA-AAttttt--ttAAATCCCAATTCAGAA 33129
|||||||| || || || ||||| || || || || | ||| || | |
Sbjct 93979 TCCATGAAGTCGAATGGGTTGGTGGAGTTGTAGAACTTCTGGTTA---CCGAGAGCGATG 94035
Query 33130 ATCAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATA 33189
| | ||| || || || || || || ||| ||||| | | ||||| || |
Sbjct 94036 AGGAGTCTGTCGGCAACAAACTCGATGTATTGCTTCATGAGAGTAGCGTTCATGCCGAGG 94095
Query 33190 AGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATA 33249
|| | ||||||||| |||| | ||||||||||| || || || || || |||
Sbjct 94096 AGACCACATGGAAGAGCATCAGTCAAGAATTCTTGTTCGATTTCAACAGCCTCGGTGATA 94155
Query 33250 ATAGATCTAACGGT-TTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGC 33308
|| | | | |||||| | || || || | | || || | | || ||
Sbjct 94156 ATGTCTTGGATGACCTTCTTCGATGGGCGGTTGTTA-AGGTGAGAGAAGAGGAGGCAGGC 94214
Query 33309 GAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGG 33368
||||| |||||||||||| || | | || | |||||| || || || || || ||
Sbjct 94215 AAAATCAGTGTGCAGACCCTCATCACGAGAGATCAATTCGTTAGAGAATGTAAGACCCGG 94274
Query 33369 CATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCC 33428
||| | || ||||| || | ||| || ||||| || || || || || |||||||| ||
Sbjct 94275 CATCATACCGCGCTTCTTCAACCAGAAGATGGATGCAAAAGAACCCGAGAAGAAGATACC 94334
Query 33429 TTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGTCATGTATCCA 33485
|| || |||||||| |||| || | | | ||| | | ||| || |||||
Sbjct 94335 CTCAACCGCAGCAAAAGCAACGAGACGTTGAGCGAAACAAGATTCTTGGTCTTGAATCCA 94394
Query 33486 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAG 33545
| ||||||||||||||||| | ||| || || || || ||||||| || |
Sbjct 94395 GTGAATGGCCCAATCGGCCTTCTTGCGGATACATGGGATGGTATCAATGGCATCGAACAA 94454
Query 33546 ATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGA 33605
|| || | | || || |||| || || ||||| | |||| || | || ||
Sbjct 94455 GTATGTTCTCTGCTTTGGCTCCTTAATGTATGTGTCGATGAGAAGAGAGTATGTCTCTGA 94514
Query 33606 ATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTAC 33665
|| ||||| || || ||||| || |||||||| |||| || || | | ||| ||
Sbjct 94515 GTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGTGCTTCTGGGACCTGAAC 94574
Query 33666 TTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAA 33725
||| | | || ||||| |||| || |||||||| || || || || ||||| ||
Sbjct 94575 TTCACCAGAGAAACGTTCGACCAAGTTCTCATTCACAATACCATCTGAAGCGGCAAAGAA 94634
Query 33726 CGCCAATACATGTTTTATAAAATA---TTTTTCGTC-TGGTGTTAGTTTATTCCAATCAT 33781
|| | ||||| || || || | ||||| | | | | || ||||| || |
Sbjct 94635 GGCAAGAACATGGGAGATGAAGTAGCGCTCATCGTCATTGAG-GCGATTGTTCCAGTCGT 94693
Query 33782 TGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTAT 33841
| ||| || || | ||| | ||||| | ||||| ||||| || || ||||| || |
Sbjct 94694 GAAGATCCTTTGACAGATCGATCTCTTCGGCAGTCCAGAATGAGGCTTCAGCCTTCTTGT 94753
Query 33842 ACATGTTCCAGAT 33854
|||| | ||||||
Sbjct 94754 ACATTTGCCAGAT 94766
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622941733638320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |