Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq698 372 8e-98 seq689 113 1e-19 >seq698 Length=89367 Score = 372 bits (412), Expect = 8e-98 Identities = 1175/1800 (65%), Gaps = 53/1800 (3%) Strand=Plus/Minus Query 363386 ATATTTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATT- 363444 ||||||| || | ||||| ||||| | ||| |||||| ||| | | |||| | | Sbjct 3080 ATATTTT-GGTTTCAAGACAATGGAAAGATCATACCTA-CTC--AAGATTGGTAACAAGC 3025 Query 363445 --GTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATG 363502 | ||| || || || || ||| | |||||||||||| |||||||| || |||| Sbjct 3024 CAGCTGAGCGACCACAACACATGCTGATGCGTGTTGCTGTTGGTATC---TGGGGTGATG 2968 Query 363503 ---TTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTA--TTCACGCACGC 363557 |||| | | ||||| || |||||| | || | | | ||||| ||||| Sbjct 2967 ACATTGAACGTGTCTTGGAAACCTACAAGCTTTT--GTCGTTGAAGACATTCACCCACGC 2910 Query 363558 CACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCT 363617 | ||||| | | ||||||||| |||| | | || |||||||| || ||||| | | Sbjct 2909 TTCCCCAACCCTTTTCAATGCTGGTACTCCTCAGCCTCAGATGTCCTCATGCTTCTTGAT 2850 Query 363618 AAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTAT 363677 | ||||| || || ||||| || |||| ||| || | |||| |||||| | || Sbjct 2849 CGACATGAAAGAGGACAGTATCGAAGGAATCTATGATACTTTGAAGACTTGTGCCATGAT 2790 Query 363678 TTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTT 363736 ||||||| || || || || ||| | || |||| |||| || || | | || Sbjct 2789 CTCCAAGACCGCCGGTGGTATCGGTCTCAACATTCACAGAATTCGAGCCACTGG-CTCTT 2731 Query 363737 ACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACA 363796 ||||| |||| || || | || || || | ||||||||||| || ||||| ||| Sbjct 2730 ACATTGGCGGGACTAATGGTTCTTCCAACGGTATTGTTCCCATGCTCCGCGTGTTCAACA 2671 Query 363797 ATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATC 363856 | ||||| || ||||| ||||||||||| || || ||| || ||||| || || | Sbjct 2670 ACACTGCTAGATACGTTGACCAGGGTGGCAACAAACGACCAGGTGCTTTTGCCATTTACC 2611 Query 363857 TCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAG 363916 | ||||| || | || |||| || || ||||| ||||| || ||| || || | Sbjct 2610 TTGAGCCATGGCACTCGGACGTTTTCGAATTCCTTGACCTCCGCAAGAACCACGGCAAGG 2551 Query 363917 AGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGC 363976 | ||| | || || ||||| || |||||||| |||||| || |||| | ||||||||| | Sbjct 2550 AAGAAGTACGAGCTCGTGACCTTTTCTATGCTCTTTGGATTCCTGATCTTTTTATGAAAC 2491 Query 363977 GCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCG 364036 | || || | | | ||| | | || ||||| || || ||||||||| ||| Sbjct 2490 GAGTTGAAAAGAATCAAGAGTGGACTTTGTTCTGCCCTCATGAGGCTCCAGGTCTAGCCG 2431 Query 364037 ATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTC 364096 | || | || || || | || | || || | || || ||| ||||| | || Sbjct 2430 ACGTCTATGGAGATGAATTTGAGGTCCTTTATGCCAAATACGAACAAGAGGGGCGTGGTC 2371 Query 364097 GTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAG 364156 | || || || || ||||| |||| || ||| | || | |||| ||||| | Sbjct 2370 GACGAACCATGAAAGCTCAAAAGCTTTGGTACGCTATCCTCGAGGCACAGACCGAGACTG 2311 Query 364157 GAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTG 364216 ||| || | ||| | ||||| ||| | |||||||| ||| ||| || || || | | Sbjct 2310 GAAATCCATTCATGCTCTACAAGGATGCCTGCAACCGAAAGAGCAATCAAAAGAACTTGG 2251 Query 364217 GTACAATTCAGCAGAGC---AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACG 364273 |||| | ||| ||||| ||| | |||||||| |||||||| ||||| ||||| || | Sbjct 2250 GTACTA-TCA--AGAGCTCTAACTTGTGTACCGAAATTATTGAGTACACTGCTCCAGATG 2194 Query 364274 AGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTG----TAAAAGATG-- 364327 | || || || || || || || || | ||||| || |||| | ||||| | Sbjct 2193 AAGTCGCTGTTTGCAATCTCGCTTCCCTCTCTCTTCCAGCCTTTGTTGATGAAAGAAGTG 2134 Query 364328 ----GTAC--TTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATC 364381 |||| ||||| | | || | | ||| | | | ||| ||||| Sbjct 2133 GCGAGTACGATTTTGGGGAACTCCACC---GGGTCGT---CCAGGTGGTCACTCGCAATT 2080 Query 364382 TCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGC-CGAGCGTTCTAATATG 364440 | ||||||| ||||| || ||||| ||| | || ||||| || | | |||||| Sbjct 2079 TGAACAAGGTCATCGATGTCAACTATTACCCAGTGCCAGAAGCACGCAAGAGC-AATATG 2021 Query 364441 CGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAG 364500 |||||||| || ||||||||||||| ||||| ||||| || | || | | | Sbjct 2020 CGTCATCGTCCAGTTGGTCTTGGTGTCCAGGGTCTCGCAGATGCATTCCTCAAATTACGT 1961 Query 364501 ATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTAT 364560 | | ||||| || || || |||||| | || | |||||||||| || || ||| Sbjct 1960 CTTCCTTTTGACTCTCCCGAGGCTCGTCAATTGAACACTCAGATCTTTGAGACCATCTAT 1901 Query 364561 TTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTAT 364620 ||| || | ||| || || | | || || |||||| ||| || || Sbjct 1900 CATGCTGCTTTAACTATGTCCTGCCAGCTTGCTCAAGAGCAGGGAACCTACGAGACATAC 1841 Query 364621 GAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCT 364680 | ||| || || |||| || || | | || | ||| | |||||||||| |||| || Sbjct 1840 GCGGGTTCACCAGTTTCCCAAGGCATCCTTCAATATGACATGTGGAATGTCAAGCCAACT 1781 Query 364681 GTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCC 364740 | | ||| ||||||| | || | | | |||||||||| ||||||||| Sbjct 1780 GATCTTTGGGACTGGGAGAGCCTCAAGGCTGATATCGCCAAGCATGGTATTCGCAACTCT 1721 Query 364741 CTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGC 364800 || | || || ||||| || ||||| || | ||||| || || ||||| |||||| Sbjct 1720 CTTTTGGTTGCTCCAATGCCTACTGCTTCAACCTCGCAGATTCTTGGTAACAATGAGTGC 1661 Query 364801 TTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTA 364860 || || || | ||| || |||| || || || || | | ||||| || | || Sbjct 1660 TTTGAGCCATACACATCAAACATTTACTCTCGTCGCGTCTTGGCTGGAGAGTTCCAAGTC 1601 Query 364861 GTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAG 364920 || || ||| | ||||||||||| | ||| || || ||| || | ||||||| Sbjct 1600 GTCAACCCATACTTGCTCAAGGATCTTGTCAACCTTGGTCTATGGTCAGATAACATGAAG 1541 Query 364921 AACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTG 364980 ||| || |||| || |||||| | || | ||||| |||| ||| | Sbjct 1540 AACAGAATTGTCGCTTCTGGTGGTTCGATTCAAGATATTCCTAATATTCCTACTGATATC 1481 Query 364981 AAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAAC-TCTCATTG---ATATGGC 365036 ||| || | ||||| ||||| |||||||| | || ||| || |||| | ||||| Sbjct 1480 AAGGCTCTATACAAGACCGTCTGGGAAAT----AAGCCAACGTCAAATTGTTCAAATGGC 1425 Query 365037 GGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCC 365096 || || ||||||||||| || ||| || || || ||| | ||||| |||| Sbjct 1424 TGCTGACCGCGGTGCTTTCATTGATCAATCTCAATCATTGAACATTCACATGAAGGAGCC 1365 Query 365097 AACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 |||| | ||| | || |||||||| ||| ||| ||||| |||||| ||||| || Sbjct 1364 AACCATGGGCAAAATCACTTCCATGCACTTCGCCGGATGGAAGCTCGGTCTCAAGACTGG 1305 >seq689 Length=208963 Score = 113 bits (124), Expect = 1e-19 Identities = 486/753 (65%), Gaps = 24/753 (3%) Strand=Plus/Minus Query 22211 ATATTCTAGCATTCTTTGCTACCGCAGACGGTATAGTTTTTGAGAATCTAGTGACTAA-- 22268 || |||| || |||||||| | |||| ||||| || |||||| | || | || Sbjct 94645 ATGTTCTTGCCTTCTTTGCCGCTTCAGATGGTATTGTGAATGAGAACTTGGT--CGAACG 94588 Query 22269 TTTTGCATCTGAAATTCAATACCCAGAGGCCAGATGTTTCTATGGTGTGCAAATGATGAT 22328 ||| | |||| |||| |||||| || |||| ||||| || | || || ||||| Sbjct 94587 TTTCTCTGGTGAAGTTCAGGTCCCAGAAGCACGATGCTTCTACGGCTTCCAGATCATGAT 94528 Query 22329 TGAAAATGTTCACGCGGAAACATATTCTATGATGCTACAGTCACTCGT--AGAAGATAAA 22386 || || | ||| | || ||||| ||| | | | | || | | || || ||| Sbjct 94527 GGAGAACATCCACTCAGAGACATACTCTCTTCTCATCGACACATACATTAAGGAGCCAAA 94468 Query 22387 GACGAACAACGAAACTTATTCCGCGCGATTCGCACCATTCAATCAATTAAGAATAAGGCA 22446 | || ||| | |||| ||| || ||| ||||| | || || || ||||| Sbjct 94467 GCAGAG-AAC-ATACTTGTTCGATGCCATTGATACCATCCCATGTATCCGCAAGAAGGCC 94410 Query 22447 GATTGGGCGCTGAAATGGAT----GAACAATGAACGTTCATTCGCGGAACGTCTTATTGC 22502 |||||||| | | ||||| || ||| ||| || ||||| ||||||| |||| Sbjct 94409 GATTGGGCCATTCACTGGATTCAAGACCAA-GAATCTTGTTTCGCTCAACGTCTCGTTGC 94351 Query 22503 ATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaa 22562 ||||||| |||||| || || ||||| || || | ||| | ||||| ||| | || Sbjct 94350 TTTTGCTGCGGTTGAGGGTATCTTCTTCTCGGGTTCTTTTGCATCCATCTTCTGGTTGAA 94291 Query 22563 aaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGG 22622 || || | || ||||||||||| || || || || || || || || |||||||| Sbjct 94290 GAAGCGCGGTATGATGCCGGGTCTTACATTCTCTAACGAATTGATCTCTCGTGATGAGGG 94231 Query 22623 TCTTCATACCGATTTTGCGTGTATGCTATATCGGAATCATATCATTCATAAACTTCCAT- 22681 ||| || || |||||||| || | || | || || | | || | || | |||| Sbjct 94230 TCTGCACACTGATTTTGCCTGCCTCCTCT-TC----TC-TCACCTTAACAACCGCCCATC 94177 Query 22682 -ATGAAACT-GTACTTGATATTATTACAAATGCAGTTGAACTTGAACGTCTATTTATTTG 22739 | ||| | | | || ||||| || | || |||||| | |||| ||| | Sbjct 94176 GAAGAAGGTCATCCAAGACATTATCACCGAGGCTGTTGAAATCGAACAAGAATTCTTGAC 94117 Query 22740 CGAGGCGTTACCAGTAAGTCTCATTGGTATCAATGCCGAATC-AATGAGTACATATATTA 22798 || || | ||| ||||| | || || || | | | || |||| ||| || Sbjct 94116 TGATGCTCTTCCATGTGGTCTCCTCGGCATGAACG-CTACTCTCATGAAGCAATACATCG 94058 Query 22799 AATTTGTTGCAGATCGTCTATTAATTTCACTCGGTTATGCAAAGCATTATAACGTCGTTA 22858 | |||||||| || | || | || | |||||| | ||| || ||| | | Sbjct 94057 AGTTTGTTGCCGACAGACTCCTCATCGCTCTCGGTAACCAGAAGTTCTACAACTCCACCA 93998 Query 22859 ATCCATTTGAATGGATGGAACTTATTTCACTTGAAGGAAAGACCAATTTCTTCGAAAAAA 22918 | ||||| || | |||||| || || |||| |||||||| || ||||| || || Sbjct 93997 ACCCATTCGACTTCATGGAAAACATCTCCCTTGCTGGAAAGACAAACTTCTTTGAGAAGC 93938 Query 22919 GAGTTGGTGAATACCAAAAAGCAGGTGTTATGG 22951 | |||||||| |||||||| || ||||| |||| Sbjct 93937 GTGTTGGTGATTACCAAAAGGCCGGTGTCATGG 93905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303341877148964