Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq667 87.8 2e-12 seq623 84.2 2e-11 >seq667 Length=237617 Score = 87.8 bits (96), Expect = 2e-12 Identities = 102/138 (74%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||| || ||||| | ||||| |||||| ||||| || ||||| |||||||| || Sbjct 144273 CGATACTATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCTCCCGACCA 144214 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 ||| | ||||| | | |||||| ||||||||||||| | | | |||||||| || Sbjct 144213 ACAACGTCTGATCTTTGCCGGCAAACAACTCGAAGATGGTCGCACTCTGAGCGATTACAA 144154 Query 24170 CATTCAAAAAGAATCTAC 24187 |||||| || || ||||| Sbjct 144153 CATTCAGAAGGAGTCTAC 144136 >seq623 Length=266034 Score = 84.2 bits (92), Expect = 2e-11 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||| |||||||| | ||||| |||||| ||||| ||||| || || ||||| || Sbjct 249577 CGATACCATCGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGAATTCCACCCGACCA 249636 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 ||| | ||||||| || |||||||||||| || |||| | | | | ||||| || || Sbjct 249637 ACAACGTCTGATTTTCGCCGGCAAGCAACTTGAGGATGGCCGCACTTTGAGCGACTACAA 249696 Query 24170 CATTCAAAA 24178 ||| ||||| Sbjct 249697 CATCCAAAA 249705 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429932321628810