Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015-
05-13] 702 sequences; 27,513,354 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq667 141 6e-29
seq107 87.8 1e-12
>seq667
Length=237617
Score = 141 bits (156), Expect = 6e-29
Identities = 168/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149
|||||| | || | ||||||||| || ||||||||||||||||||||||||||||| ||
Sbjct 143365 ACCACCACGTAATCTCAACACCAAGTGGAGAGTGCTCTCCTTTTGAATATTGTAATCTGA 143424
Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209
|||| || | || || |||||||| || || || || |||||||| ||||| | ||
Sbjct 143425 CAAAGTTCGGCCATCTTCCAATTGTTTACCTGCGAAGATCAGGCGTTGCTGATCTGGTGG 143484
Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269
| ||||| |||||| || || ||||| || | | || ||| |||||
Sbjct 143485 AATTCCTTCCTTGTCCTGGATCTTGGATTTCACGTTGTCAATTGTGTCTGATGACTCAAC 143544
Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
||| | ||| || ||||| |||||||| || ||||| || || |||||
Sbjct 143545 TTCCAGTGTGATTGTTTTGCCCGTCAAAGTCTTCACAAAGATTTGCAT 143592
Score = 91.5 bits (100), Expect = 1e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 38115 TGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGT 38174
|| || ||||||||||| ||||| |||||||| |||||| || | || || | |||
Sbjct 143618 TGGAGTGTGCTCTCCTTCTGAATGTTGTAATCTGACAAAGTTCGGCCATCTTCCAGTTGC 143677
Query 38175 TTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTT 38234
||||| ||||| || |||||||| ||||| | || | || || || || || ||
Sbjct 143678 TTTCCAGCAAAGATCAGGCGTTGCTGATCTGGTGGAATCCCCTCCTTATCTTGGATCTTG 143737
Query 38235 TGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTC 38294
||||| || | | || ||| || ||||| ||||| || || || || |||
Sbjct 143738 GATTTCACGTTATCAATCGTGTCTGATGACTCGACTTCCAATGTGATCGTCTTTCCGGTC 143797
Query 38295 AAGGTTTTCACGAATATCTGCAT 38317
|| || ||||| || ||||||||
Sbjct 143798 AACGTCTTCACAAAGATCTGCAT 143820
>seq107
Length=66004
Score = 87.8 bits (96), Expect = 1e-12
Identities = 125/174 (72%), Gaps = 4/174 (2%)
Strand=Plus/Plus
Query 6187 ATGTGGCGGACGCGTTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTA 6246
|||| | ||| | |||||||| ||||| ||| |||||| ||||| |||||||||
Sbjct 32776 ATGTCACCGACCCCTTCTACCGTTACAAGATGGAACGCATCCAATCCAAGATCGAGGGTA 32835
Query 6247 AGGGAAACGGTATTAAAACCGTCATTGTCAACATGCCTGAA--GTCGCTAAGGCGCTCGG 6304
| || ||||||||||||||||| | |||||| | | | | ||| | | | || |
Sbjct 32836 AAGGCAACGGTATTAAAACCGTTGTCGTCAACCT--CAGCAGTGTCTCCCAATCACTGGC 32893
Query 6305 ACGCCCTGCCACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGAC 6358
||||||| | | ||| || ||||| || || | ||||||||| ||||| ||
Sbjct 32894 ACGCCCTCCATCTTACGTGATTAAATACTTTGGCTTCGAACTTGGTGCTCAAAC 32947
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334944334317362
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |