Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq698 246 4e-60 >seq698 Length=89367 Score = 246 bits (272), Expect = 4e-60 Identities = 1219/1921 (63%), Gaps = 75/1921 (4%) Strand=Plus/Plus Query 61838 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 61897 |||| ||| | || |||||||| || || | || | | || || |||||||||||| Sbjct 1245 TCCTGGTCGACAGTAAATTGAATTGGTGCAGCAGCAGCCATGGTGCGGAGATAGTACATT 1304 Query 61898 CCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTC 61957 || || || |||||||| |||||||| || ||||| || | |||| | Sbjct 1305 CCAGTCTTGAGACCGAGCTTCCATCCGGCGAAGTGCATGGAAGTGATTTTGCCCATGGTT 1364 Query 61958 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 62017 || || || || || |||| |||||| |||||| ||||| || || | ||| ||| Sbjct 1365 GGCTCCTTCATGTGAATGTTCAATGATTGAGATTGATCAATGAAAGCACCGCGGTCAGCA 1424 Query 62018 GCCATTTTTATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATA 62077 ||||||| | ||| ||| |||||||| | || || || | ||| ||| Sbjct 1425 GCCATTTGAACAATTTGACGTTGGCTTATTTCCCAGACGGTCTTGTATAGAGCCTTGATA 1484 Query 62078 TCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTG 62134 || |||| || | ||| ||||| || |||||| || | ||| || ||||| Sbjct 1485 TCAGTAGGAATATTAGGAATATCTTGAATCGAACCACCAGAAGCGACAATTCTGTTCTTC 1544 Query 62135 ATCTCATCATTCCATAATTTTCTCTCGGTTAAAAC--TC--TAAGGAGATGCGGATTAAC 62190 || | ||| ||||| | |||| | | || | || | | || || || Sbjct 1545 ATGTTATCTGACCATAGAC----CAAGGTTGACAAGATCCTTGAGCAAGTATGGGTTGAC 1600 Query 62191 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCAC 62250 ||||| || ||||||| ||| || | |||| |||||| || || || || || | Sbjct 1601 GACTTGGAACTCTCCAGCCAAGACGCGACGAGAGTAAATGTTTGATGTGTATGGCTCAAA 1660 Query 62251 AGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAA 62310 ||||||| || || | ||| || | ||||| ||||| ||||| || || ||||| | Sbjct 1661 GCACTCATTGTTACCAAGAATCTGCGAGGTTGAAGCAGTAGGCATTGGAGCAACCAAAAG 1720 Query 62311 ACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATC 62370 | || | || ||| | | ||| | | | || || ||||| | ||||||||| Sbjct 1721 AGAGTTGCGAATACCATGCTTGGCGATATCAGCCTTGAGGCTCTCCCAGTCCCAAAGATC 1780 Query 62371 CGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTT----ACTGGCGTACGATC 62426 | || || ||| || || || | ||||| | || Sbjct 1781 AGTTGGCTTGACATTCCACATGTCATATTGAAGGATGCCTTGGGAAACTGGTGAAC---- 1836 Query 62427 CTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCAC 62486 | | ||||| ||||| | ||| | || | ||| || | || | ||| ||| Sbjct 1837 CCGCGTATGTCTCGTAGGTTCCCTGCTCTTGAGCAAGCTGGCAGGACATAGTTAAAGCAG 1896 Query 62487 CGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATG 62546 | | ||| ||||| || ||||||| | || | | | || || | ||||| | Sbjct 1897 CATGATAGATGGTCTCAAAGATCTGAGTGTTCAATTGACGAGCCTCGGGAGAGTCAAAAG 1956 Query 62547 GA-----TAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGG 62601 || |||||| || |||| || ||||| | || || ||||||| ||| | || Sbjct 1957 GAAGACGTAATTTGAG-GAAT----GCATCTGCGAGACCCTGGACACCAAGACCAACTGG 2011 Query 62602 TCTATGTCTCTTATTAGAGATTTCA-GCTTCTGGAATAGGATAATAATTAATATCTATAA 62660 | ||| | | |||| | || | |||||||| | || ||||| || | ||| || | Sbjct 2012 ACGATGACGCATATT-GCTCTTGCGTGCTTCTGGCACTGGGTAATAGTTGACATCGATGA 2070 Query 62661 TTTTATTGAGATTTC---TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAA 62717 || || | ||| | |||| | | | ||| || | |||| |||||| Sbjct 2071 CCTTGTTCAAATTGCGAGTGACCA---CCTGGACGACCCGGTGGAGTTCCCCAAAATCGT 2127 Query 62718 A-TCGCC-CATCTATTACAAACAT--GTTCAATGCAACAG--ATGCCAGATTACAAACGG 62771 | ||||| | ||| | | |||| | | | | | || | || ||||| ||||| | Sbjct 2128 ACTCGCCACTTCTTTCATCAACAAAGGCTGGAAGAGAGAGGGAAGCGAGATTGCAAACAG 2187 Query 62772 CTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGG 62831 | || |||| | | | | || | || || || || || | ||| | |||||| | Sbjct 2188 CGACTTCATCTGGAGCAGTGTACTCAATAATTTCGGTACACAAGTTAGAGCTCTTGATAG 2247 Query 62832 TTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAG 62891 | || || || | |||||| |||||| ||| || |||||||| || || ||||||||| Sbjct 2248 TACCCAAGTTCTTTTGATTGCTCTTTCGGTTGCAGGCATCCTTGTAGAGCATGAATGGAT 2307 Query 62892 TACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAG 62951 | ||||| || |||| | || | || || | ||| | | |||| || || | Sbjct 2308 TTCCAGTCTCGGTCTGTGCCTCGAGGATAGCGTACCAAAGCTTTTGAGCTTTCAT----G 2363 Query 62952 ATTTGT--ATCTCTTTTCTCTT--TCGTATAGTGTATACAATCGTTCGAACTCGTCTCCC 63007 || || | | | ||||| |||||| | ||| | || || || ||||| Sbjct 2364 GTTCGTCGACCACGCCCCTCTTGTTCGTATTTGGCATAAAGGACCTCAAATTCATCTCCA 2423 Query 63008 CAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCC 63067 | || | | | || || ||| |||| || || | ||| | ||||||| | || | Sbjct 2424 TAGACGTCGGCTAGACCTGGAGCCTCATGAGGGCAGAACAAAGTCCACTCT---TGATTC 2480 Query 63068 TTC---ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGT 63123 || |||||||||||||| |||||||||||||||||||| ||| || || || | | Sbjct 2481 TTTTCAACTCGTTTCATAAAAAGATCAGGAATCCAAAGAGC-ATAGAAAAGGTCACGAGC 2539 Query 63124 TCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATG 63183 || ||| || || || ||||| || || ||||| | | || || || || Sbjct 2540 TCGTACTTCTTCCTTGCCGTGGTTCTTGCGGAGGTCAAGGAATTCGAAAACGTCCGAGTG 2599 Query 63184 CCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTA 63243 ||| || || | ||| ||||| | | | || || |||||||| || ||||| || | ||| Sbjct 2600 CCATGGCTCAAGGTAAATGGCAAAAGCACCTGGTCGTTTGTTGCCACCCTGGTCAACGTA 2659 Query 63244 TCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGT 63303 |||||| ||||| || | || | | ||| |||| |||||| ||||| | |||||| || Sbjct 2660 TCTAGCAGTGTTGTTGAACACGCGGAGCATGGGAACAATACCGTTGGAAGAACCATTAGT 2719 Query 63304 CCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGC 63363 ||| || || ||| |||| ||||| | ||| ||||| || || || || Sbjct 2720 CCCGCCAATGTAAGAGCCAGTGGCTCGAATTCTGTGAATGTTGAGACCGATACCACCGGC 2779 Query 63364 CATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATC 63423 | || ||||| | || || || || ||||||||||| || || ||||| || || Sbjct 2780 GGTCTTGGAGATCATGGCACAAGTCTTCAAAGTATCATAGATTCCTTCGATACTGTCCTC 2839 Query 63424 CATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAA 63483 |||||| | | || || ||||| || | || ||| || ||||| || | Sbjct 2840 TTTCATGTCGATCAAGAAGCATGAGGACATCTGAGGCTGAGGAGTACCAGCATTGAAAAG 2899 Query 63484 GGTAGGAGAAGCGTGAGTAAACCATTTTTCA--GAAAGTAGATTGTACGTCT-CAATA-- 63538 ||| || |||||||| || || | |||| || | || ||||| || | ||| | Sbjct 2900 GGTTGGGGAAGCGTGGGTGAA--TGTCTTCAACGACAAAAGCTTGTAGGTTTCCAAGACA 2957 Query 63539 -GCTGA--GTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGA 63595 | | | ||| | |||| || || || || |||||||| | |||||| || Sbjct 2958 CGTTCAATGTCATCACCCCA------GATACCAACAGCAACACGCATCAGCATGTGTTGT 3011 Query 63596 GGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAA 63655 |||| ||| | |||||| || || | | ||| ||| |||||| || || ||| Sbjct 3012 GGTCGCTCAGCTGGCTTGTTACCAATCTTGAGTAGGTATGATCTTTCCATTGTCTTGAAA 3071 Query 63656 CCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTA 63715 |||||||| | || |||||||| ||||| | ||| ||||||||| || ||||| | Sbjct 3072 CCAAAATATTGATAGTTAAAGTCTCTGTCGTAGACGATAGCCGAGTTGAATTCATCCTCA 3131 Query 63716 T 63716 | Sbjct 3132 T 3132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633626439879200