Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015-
05-13] 702 sequences; 27,513,354 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq623 138 1e-27
seq96 132 4e-26
seq667 129 5e-25
>seq623
Length=266034
Score = 138 bits (152), Expect = 1e-27
Identities = 129/164 (79%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
|| |||||||| |||||||||| |||||| | |||||||| | ||| || ||||
Sbjct 249542 ACGGGTAAAACCATCACTCTTGAGGTGGAATCATCCGATACCATCGACAATGTCAAGTCC 249601
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| |||||||||||||| || ||||||||||| ||||||||||| || || ||||||||
Sbjct 249602 AAGATTCAAGACAAGGAAGGAATTCCACCCGACCAACAACGTCTGATTTTCGCCGGCAAG 249661
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406
|| | |||||| |||||| | ||| |||||||| |||||
Sbjct 249662 CAACTTGAGGATGGCCGCACTTTGAGCGACTACAACATCCAAAA 249705
>seq96
Length=163266
Score = 132 bits (146), Expect = 4e-26
Identities = 148/198 (75%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || || || || | || ||||| ||| |||| ||||| |||||| | ||
Sbjct 52640 ATGCAAATCTTCGTCAAGACCCTCACGGGTAAGACGATCACCCTTGAGGTGGAATCGTCC 52699
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | ||| || |||| || || || || |||||||| || ||||| || |||
Sbjct 52700 GATACCATCGACAATGTCAAGTCCAAGATCCAGGATAAGGAGGGCATCCCACCTGACCAA 52759
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|||||||| || || |||||||| || | || || || || | ||||||||||||
Sbjct 52760 CAACGTCTGATCTTCGCCGGCAAGCAACTCGAAGACGGTCGTACTTTGTCCGATTACAAC 52819
Query 22399 ATTCAAAAAGAATCCACC 22416
|| || || |||||||||
Sbjct 52820 ATCCAGAAGGAATCCACC 52837
>seq667
Length=237617
Score = 129 bits (142), Expect = 5e-25
Identities = 140/186 (75%), Gaps = 0/186 (0%)
Strand=Plus/Minus
Query 22231 GTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGAC 22290
|| || ||| | || || || || |||| ||||| || || | | |||||| | |||
Sbjct 144036 GTCAAGACTCTTACTGGCAAGACCATCACCCTTGAGGTCGAGTCTTCAGATACCATCGAC 143977
Query 22291 GATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATA 22350
| |||| ||| || || |||||||||||||| |||||||||||||||||||| ||
Sbjct 143976 AACGTCAAGTCAAAGATCCAGGACAAGGAGGGTATCCCACCCGATCAACAACGTCTCATT 143917
Query 22351 TTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAA 22410
|| || ||||| || || |||||| ||| || |||| ||||||||||| || || |||
Sbjct 143916 TTCGCTGGCAAGCAATTGGAGGATGGCCGTACTCTCTCAGATTACAACATCCAGAAGGAA 143857
Query 22411 TCCACC 22416
|| |||
Sbjct 143856 TCTACC 143851
Score = 127 bits (140), Expect = 2e-24
Identities = 132/173 (76%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
||||| || || |||||||||| || ||| | ||||||| | ||| || ||||
Sbjct 144308 ACCGGAAAGACCATCACTCTTGAGGTCGAATCTTCCGATACTATCGACAATGTCAAGTCC 144249
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| ||||| ||||||||||| ||||| ||||| ||||||||||| || ||||||||||||
Sbjct 144248 AAGATTCAGGACAAGGAGGGCATTCCTCCCGACCAACAACGTCTGATCTTTGCCGGCAAA 144189
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415
|| | || ||| ||||| | ||||||||||||||| || || || ||
Sbjct 144188 CAACTCGAAGATGGTCGCACTCTGAGCGATTACAACATTCAGAAGGAGTCTAC 144136
Score = 96.9 bits (106), Expect = 3e-15
Identities = 136/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || || || ||||| || ||| |||| | ||||| || | |
Sbjct 143820 ATGCAGATCTTTGTGAAGACGTTGACCGGAAAGACGATCACATTGGAAGTCGAGTCATCA 143761
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | || | | ||| || || ||||| |||||||| |||||||| |||||
Sbjct 143760 GACACGATTGATAACGTGAAATCCAAGATCCAAGATAAGGAGGGGATTCCACCAGATCAG 143701
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||||| || || ||||| || || || | || ||| ||| || | || |||||||||
Sbjct 143700 CAACGCCTGATCTTTGCTGGAAAGCAACTGGAAGATGGCCGAACTTTGTCAGATTACAAC 143641
Query 22399 ATTCAAAAAGA 22409
||||| || ||
Sbjct 143640 ATTCAGAAGGA 143630
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419724408964630
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |