Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015-
05-13] 702 sequences; 27,513,354 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq667 120 3e-22
seq96 100 2e-16
>seq667
Length=237617
Score = 120 bits (132), Expect = 3e-22
Identities = 114/146 (78%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | | || | ||| | ||||| || || |||||||||||||||
Sbjct 144103 ATACCACCACGAAGGCGGAGGACAAGATGGAGAGTAGACTCCTTCTGAATGTTGTAATCG 144162
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|||| ||| ||| |||||| |||||||| || || |||| ||||| |||||||| |||
Sbjct 144163 CTCAGAGTGCGACCATCTTCGAGTTGTTTGCCGGCAAAGATCAGACGTTGTTGGTCGGGA 144222
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTT 114298
|||||||| || ||||| ||||||
Sbjct 144223 GGAATGCCCTCCTTGTCCTGAATCTT 144248
Score = 100 bits (110), Expect = 2e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|| |||||||||| ||||| || | || | || || || ||||||||||||||
Sbjct 143591 ATTCCGCCACGTAATCTCAGCACAAGGTGGAGTGTGCTCTCCTTCTGAATGTTGTAATCT 143650
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| ||| || |||||| ||||| || ||||| |||| || || || || || ||
Sbjct 143651 GACAAAGTTCGGCCATCTTCCAGTTGCTTTCCAGCAAAGATCAGGCGTTGCTGATCTGGT 143710
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||| || || || || ||||| ||| | | |||| ||||| | || |||
Sbjct 143711 GGAATCCCCTCCTTATCTTGGATCTTGGATTTCACGTTATCAATCGTGTCTGATGACTCG 143770
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| || | ||| || ||||||| || || ||||| ||||||||
Sbjct 143771 ACTTCCAATGTGATCGTCTTTCCGGTCAACGTCTTCACAAAGATCTGCAT 143820
Score = 82.4 bits (90), Expect = 6e-11
Identities = 149/218 (68%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | | || | || | |||||||| || || |||||||||||
Sbjct 143819 ATACCACCACGGAGACGAAGGACAAGGTGAAGGGTAGATTCCTTCTGGATGTTGTAATCT 143878
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| |||||| ||| || | ||| || |||||| | |||||||| ||||| || ||
Sbjct 143879 GAGAGAGTACGGCCATCCTCCAATTGCTTGCCAGCGAAAATGAGACGTTGTTGATCGGGT 143938
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || || || ||||| |||||| || | | || | ||| || | || |||
Sbjct 143939 GGGATACCCTCCTTGTCCTGGATCTTTGACTTGACGTTGTCGATGGTATCTGAAGACTCG 143998
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 114370
|| || | ||| | || ||||| || ||||| || ||
Sbjct 143999 ACCTCAAGGGTGATGGTCTTGCCAGTAAGAGTCTTGAC 144036
>seq96
Length=163266
Score = 100 bits (110), Expect = 2e-16
Identities = 141/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| ||||| || || |||||||||||| || ||||||| ||||| ||||| || ||
Sbjct 52836 GTGGATTCCTTCTGGATGTTGTAATCGGACAAAGTACGACCGTCTTCGAGTTGCTTGCCG 52777
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
||| |||| ||||| |||||||| || || ||||| || || || ||||| ||
Sbjct 52776 GCGAAGATCAGACGTTGTTGGTCAGGTGGGATGCCCTCCTTATCCTGGATCTTGGACTTG 52717
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | || | ||| |||| ||||| || || | ||| | ||| || || || || ||
Sbjct 52716 ACATTGTCGATGGTATCGGACGATTCCACCTCAAGGGTGATCGTCTTACCCGTGAGGGTC 52657
Query 114366 TTTACAAAAATCTGCATG 114383
|| || || || ||||||
Sbjct 52656 TTGACGAAGATTTGCATG 52639
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420130805487624
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |