Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq667 120 3e-22 seq96 100 2e-16 >seq667 Length=237617 Score = 120 bits (132), Expect = 3e-22 Identities = 114/146 (78%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || | ||| | ||||| || || ||||||||||||||| Sbjct 144103 ATACCACCACGAAGGCGGAGGACAAGATGGAGAGTAGACTCCTTCTGAATGTTGTAATCG 144162 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 |||| ||| ||| |||||| |||||||| || || |||| ||||| |||||||| ||| Sbjct 144163 CTCAGAGTGCGACCATCTTCGAGTTGTTTGCCGGCAAAGATCAGACGTTGTTGGTCGGGA 144222 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTT 114298 |||||||| || ||||| |||||| Sbjct 144223 GGAATGCCCTCCTTGTCCTGAATCTT 144248 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || |||||||||| ||||| || | || | || || || |||||||||||||| Sbjct 143591 ATTCCGCCACGTAATCTCAGCACAAGGTGGAGTGTGCTCTCCTTCTGAATGTTGTAATCT 143650 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || ||| || |||||| ||||| || ||||| |||| || || || || || || Sbjct 143651 GACAAAGTTCGGCCATCTTCCAGTTGCTTTCCAGCAAAGATCAGGCGTTGCTGATCTGGT 143710 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| || || || || ||||| ||| | | |||| ||||| | || ||| Sbjct 143711 GGAATCCCCTCCTTATCTTGGATCTTGGATTTCACGTTATCAATCGTGTCTGATGACTCG 143770 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | ||| || ||||||| || || ||||| |||||||| Sbjct 143771 ACTTCCAATGTGATCGTCTTTCCGGTCAACGTCTTCACAAAGATCTGCAT 143820 Score = 82.4 bits (90), Expect = 6e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || | || | |||||||| || || ||||||||||| Sbjct 143819 ATACCACCACGGAGACGAAGGACAAGGTGAAGGGTAGATTCCTTCTGGATGTTGTAATCT 143878 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | |||||| ||| || | ||| || |||||| | |||||||| ||||| || || Sbjct 143879 GAGAGAGTACGGCCATCCTCCAATTGCTTGCCAGCGAAAATGAGACGTTGTTGATCGGGT 143938 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || || || ||||| |||||| || | | || | ||| || | || ||| Sbjct 143939 GGGATACCCTCCTTGTCCTGGATCTTTGACTTGACGTTGTCGATGGTATCTGAAGACTCG 143998 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 114370 || || | ||| | || ||||| || ||||| || || Sbjct 143999 ACCTCAAGGGTGATGGTCTTGCCAGTAAGAGTCTTGAC 144036 >seq96 Length=163266 Score = 100 bits (110), Expect = 2e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || ||||| || || |||||||||||| || ||||||| ||||| ||||| || || Sbjct 52836 GTGGATTCCTTCTGGATGTTGTAATCGGACAAAGTACGACCGTCTTCGAGTTGCTTGCCG 52777 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||| ||||| |||||||| || || ||||| || || || ||||| || Sbjct 52776 GCGAAGATCAGACGTTGTTGGTCAGGTGGGATGCCCTCCTTATCCTGGATCTTGGACTTG 52717 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | ||| |||| ||||| || || | ||| | ||| || || || || || Sbjct 52716 ACATTGTCGATGGTATCGGACGATTCCACCTCAAGGGTGATCGTCTTACCCGTGAGGGTC 52657 Query 114366 TTTACAAAAATCTGCATG 114383 || || || || |||||| Sbjct 52656 TTGACGAAGATTTGCATG 52639 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420130805487624