Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq689 196 9e-45 seq698 127 4e-24 >seq689 Length=208963 Score = 196 bits (216), Expect = 9e-45 Identities = 496/732 (68%), Gaps = 23/732 (3%) Strand=Plus/Minus Query 42423 CTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATG 42482 || |||||||| ||||| || || || || || ||||||||| ||| | | ||| Sbjct 94640 CTTGCCTTCTTTGCCGCTTCAGATGGTATTGTGAATGAGAACTTGGTCGAACGTTTCTCT 94581 Query 42483 AAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAAC 42542 || || ||| | || || || |||||||||||||||||||| || |||||| Sbjct 94580 GGTGAAGTTCAGGTCCCAGAAGCACGATGCTTCTACGGCTTCCAGATCATGATGGAGAAC 94521 Query 42543 GTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCGT 42602 | ||||| ||| ||| | || || |||| ||||| ||| || || | Sbjct 94520 ATCCACTCAGAGACATACTCTCTTCTCATCGACACATACATTAAGGAGCCAAAGCAGAG- 94462 Query 42603 AACGGGCT-GTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGC 42661 ||| || |||| | ||||| || || || || || ||| |||||||| || ||||| Sbjct 94461 AACATACTTGTTCGATGCCATTGATACCATCCCATGTATCCGCAAGAAGGCCGATTGGGC 94402 Query 42662 GCTCAACTGGATCGAGAGTCCC-GACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCG 42720 | ||||||| | || || || | |||| | | || || || ||| | | Sbjct 94401 CATTCACTGGATTCA-AGACCAAGAATCTTGTTTCGCTCAACGTCTCGTTGCTTTTGCTG 94343 Query 42721 CCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAA-G 42779 | || ||||| |||||||||||||| | || || |||||||||||| | ||| || | Sbjct 94342 CGGTTGAGGGTATCTTCTTCTCGGGTTCTTTTGCATCCATCTTCTGGTTGAAGAAGCGCG 94283 Query 42780 GTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCAT 42839 || | |||||| || || || ||||| |||||| | ||| | || ||||| ||||| Sbjct 94282 GTAT-GATGCCGGGTCTTACATTCTCTAACGAATTGATCTCTCGTGATGAGGGTCTGCAC 94224 Query 42840 AGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAA--GCCC-TCGAAGGAG 42896 | || |||||||||||||| ||||| ||||| | |||| |||| |||||| || Sbjct 94223 ACTGATTTTGCCTGCCTCCTCTTCTC---TCACCTTA---ACAACCGCCCATCGAAGAAG 94170 Query 42897 CGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCG 42956 ||| | ||| ||||| ||||| || || ||||| | || ||| | || | | Sbjct 94169 GTCATCCAAGACATTATCACCGAGGCTGTTGAAATCGAACAAGAATTCTTGACTGATGCT 94110 Query 42957 CTGCC-CGTGTCCCTGGTCGGCATGAACCACGAC-CTCATG-TGCAAGTACATCCAGTAC 43013 || || ||| || |||||||||| | | || |||||| |||| |||||| ||| Sbjct 94109 CTTCCATGTG-GTCTCCTCGGCATGAA-CGCTACTCTCATGAAGCAA-TACATCGAGTTT 94053 Query 43014 GTCGCCGACCATCTCCTGTGCCAGATGGGT-CTCAGCCGCCTCTACAACACGCCGTGCCC 43072 || |||||| ||||| | | ||| ||| | |||||||| | | ||| Sbjct 94052 GTTGCCGACAGACTCCTCATCGCTCTCGGTAACCAGAAG-TTCTACAACTCCACCAACCC 93994 Query 43073 CTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGT 43132 |||||||| ||||| |||||||| | | || ||||| ||||| || |||||||| || Sbjct 93993 ATTCGACTTCATGGAAAACATCTCCCTTGCTGGAAAGACAAACTTCTTTGAGAAGCGTGT 93934 Query 43133 CGCCGACTACCA 43144 | || ||||| Sbjct 93933 TGGTGATTACCA 93922 >seq698 Length=89367 Score = 127 bits (140), Expect = 4e-24 Identities = 573/900 (64%), Gaps = 20/900 (2%) Strand=Plus/Plus Query 244541 GCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGCGGGTGATCATG 244600 ||||| ||||| |||||| ||||| | ||||| |||||||| | ||||| |||| || Sbjct 2037 GCTTCTGGCACTGGGTAATAGTTGACATCGATGACCTTGTTCAAATTGCGAGTGACCACC 2096 Query 244601 CGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGGATCCTCGGCGATGGTGATC 244660 ||||||| | || | ||| ||||||||| || | | | | | Sbjct 2097 TGGACGACCCGGTGGAGTTCCCCAAAATCGTACTCG-------CCACTTCTTTCATCA-- 2147 Query 244661 CTCACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTG 244720 ||||| | || | || | || || ||||| || || || || || | Sbjct 2148 ---ACAAAGGCTGGAAGAGAGAGGGAAGCGAGATTGCAAACAGCGACTTCATCTGGAGCA 2204 Query 244721 GTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGA 244780 ||||||| | ||| ||||| || | |||| || |||||| || |||| || || ||| Sbjct 2205 GTGTACTCAATAATTTCGGTACACAAGTTAGAGCTCTTGATAGTACCCAAGTTCTTTTGA 2264 Query 244781 TTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGG 244840 ||| ||| ||||||||| ||||||||||||||||| || || |||||| ||| Sbjct 2265 TTGCTCTTTCGGTTGCAGGCATCCTTGTAGAGCATGAATGGATTTCCAGTCTCGGTCTGT 2324 Query 244841 GCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCT 244900 || |||||| || ||| || | ||| || | || | ||| | |||||| Sbjct 2325 GCCTCGAGGATAGCGTACCAAAGCTTTTGAGCTTTCATGGTTCGTCGACCACGCCCCTCT 2384 Query 244901 GCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCC-GGG 244959 ||||| || || ||| |||| || || || |||| ||| |||| || || Sbjct 2385 TGTTCGTATTTGGCATAAAGGACCTCAAATTCATCTCCATAGACGTCGGCTAGACCTGGA 2444 Query 244960 GCACGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAG 245019 || | | ||||| | | | ||||||| | | || | | ||| || || Sbjct 2445 GCCTCATG-AGGGCAGAACAAAGTCCACTCTTGATTCTTTTCAACTCGTTTCATAAAAAG 2503 Query 245020 GTCGGGGATCCAGAGGGCCTGGAAGAGGTC-CCTGGTCCT-CTGCTCGTCCGAGCCAGTG 245077 || || ||||| || || | ||| ||||| | | || | || || ||| ||| | Sbjct 2504 ATCAGGAATCCAAAGAGCATAGAAAAGGTCACGAGCTCGTACT--TCTTCCTTGCCGTGG 2561 Query 245078 TTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCG 245137 ||||| | || || | || || || ||||| |||||| ||||| | ||| | || Sbjct 2562 TTCTTGCGGAGGTCAAGGAATTCGAAAACGTCCGAGTGCCATGGCTCAAGGTAAATGGCA 2621 Query 245138 AGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGCG-CGTTGAAGAT 245196 | || || || || |||||||| |||||||| || || | || | |||||| | Sbjct 2622 AAAGCACCTGGTCGTTTGTTGCCACCCTGGTCAACGTATCTAGC-AGTGTTGTTGAACAC 2680 Query 245197 GCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTT 245256 ||| || | || || || ||||| || || || || || ||||| | ||| | Sbjct 2681 GCGGAGCATGGGAACAATACCGTTGGAAGAACCATTAGTCCCGCCAATGTAAGAGCCAGT 2740 Query 245257 GCCCCTGAGGTTGCTGATGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCA 245316 | | | | || ||| | || | || |||||| ||||||||| | ||| || Sbjct 2741 GGCTCGAATTCTGTGAATGTTGAGACCGATACCACCGGCGGTCTTGGAGATCATGGCACA 2800 Query 245317 GCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCA 245376 |||| | || || || || || || |||||| ||||||| || || ||||| Sbjct 2801 AGTCTTCAAAGTATCATAGATTCCTTCGATACTGTCCTCTTTCATGTCGATCAAGAAGCA 2860 Query 245377 GGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAA 245436 ||||||| ||| |||| || | | | ||||| || || ||| |||||||| || Sbjct 2861 TGAGGACATCTGAGGCTGAGGAGTACCAGCATTGAAAAGGGTTGGGGAAGCGTGGGTGAA 2920 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944330913423520