Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq96 147 5e-30 seq667 131 4e-25 seq623 93.3 1e-13 >seq96 Length=163266 Score = 147 bits (162), Expect = 5e-30 Identities = 171/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || || |||| ||| ||| || ||||| || || |||| Sbjct 52866 CCACCTCGAAGACGGAGGACAAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAATCGGAC 52807 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || || |||||||| | ||| || || |||||||||||||| ||||| | |||| Sbjct 52806 AAAGTACGACCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGACGTTGTTGGTCAGGTGGG 52747 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || ||||||||||| || | || || || || || | |||| |||||| || Sbjct 52746 ATGCCCTCCTTATCCTGGATCTTGGACTTGACATTGTCGATGGTATCGGACGATTCCACC 52687 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 || || ||||||||||| || || || ||||||||||| || ||||| ||| Sbjct 52686 TCAAGGGTGATCGTCTTACCCGTGAGGGTCTTGACGAAGATTTGCATGATG 52636 >seq667 Length=237617 Score = 131 bits (144), Expect = 4e-25 Identities = 178/246 (72%), Gaps = 3/246 (1%) Strand=Plus/Plus Query 288229 ATGATGATTCATACATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTT 288288 ||||| ||| ||| || ||||| || | ||| | || | || | ||||| || ||| Sbjct 143351 ATGATCATT--TAC-TGACCACCACGTAATCTCAACACCAAGTGGAGAGTGCTCTCCTTT 143407 Query 288289 TGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGA 288348 || ||||| || || | | || || || ||||| |||||||| |||||||||||||| Sbjct 143408 TGAATATTGTAATCTGACAAAGTTCGGCCATCTTCCAATTGTTTACCTGCGAAGATCAGG 143467 Query 288349 CGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATA 288408 || || ||| ||| |||||||| || |||||||| || | ||||||||| || || Sbjct 143468 CGTTGCTGATCTGGTGGAATTCCTTCCTTGTCCTGGATCTTGGATTTCACGTTGTCAATT 143527 Query 288409 GAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATC 288468 | || || || ||||| || ||||| || || || |||| |||||| || || || Sbjct 143528 GTGTCTGATGACTCAACTTCCAGTGTGATTGTTTTGCCCGTCAAAGTCTTCACAAAGATT 143587 Query 288469 TGCATT 288474 |||||| Sbjct 143588 TGCATT 143593 Score = 116 bits (128), Expect = 9e-21 Identities = 156/217 (72%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || || |||| || ||| || ||||| || || || | | Sbjct 143822 CCACCACGGAGACGAAGGACAAGGTGAAGGGTAGATTCCTTCTGGATGTTGTAATCTGAG 143881 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || ||||| || || ||||| || ||||| |||||| |||| Sbjct 143882 AGAGTACGGCCATCCTCCAATTGCTTGCCAGCGAAAATGAGACGTTGTTGATCGGGTGGG 143941 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| || | || ||||| || || | ||| || || || Sbjct 143942 ATACCCTCCTTGTCCTGGATCTTTGACTTGACGTTGTCGATGGTATCTGAAGACTCGACC 144001 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGA 288463 || || ||||| ||||| || || ||||||||||||| Sbjct 144002 TCAAGGGTGATGGTCTTGCCAGTAAGAGTCTTGACGA 144038 Score = 109 bits (120), Expect = 1e-18 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||| || || | ||| || || || || | ||||| || || || || || || || | Sbjct 143593 TCCGCCACGTAATCTCAGCACAAGGTGGAGTGTGCTCTCCTTCTGAATGTTGTAATCTGA 143652 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 | || || || ||||| | ||| ||||| || |||||||| || || ||| ||| Sbjct 143653 CAAAGTTCGGCCATCTTCCAGTTGCTTTCCAGCAAAGATCAGGCGTTGCTGATCTGGTGG 143712 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 || || || ||||| ||||| || | ||||||||| || || | || || || || Sbjct 143713 AATCCCCTCCTTATCTTGGATCTTGGATTTCACGTTATCAATCGTGTCTGATGACTCGAC 143772 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| | ||||||||||| ||||||| ||||| || || |||||||| Sbjct 143773 TTCCAATGTGATCGTCTTTCCGGTCAACGTCTTCACAAAGATCTGCAT 143820 >seq623 Length=266034 Score = 93.3 bits (102), Expect = 1e-13 Identities = 128/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 |||||||| || |||||| | ||||| || || || | ||| || || ||||| ||| Sbjct 249705 TTTTGGATGTTGTAGTCGCTCAAAGTGCGGCCATCCTCAAGTTGCTTGCCGGCGAAAATC 249646 Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405 ||||| ||||| ||| |||||||| || || || || || | || || || || Sbjct 249645 AGACGTTGTTGGTCGGGTGGAATTCCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCG 249586 Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464 || | |||| ||||| || || || ||||| || || || || || ||||||||||| Sbjct 249585 ATGGTATCGGATGATTCCACCTCAAGAGTGATGGTTTTACCCGTGAGGGTCTTGACGAA 249527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179643789745956