Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq95 105 1e-17 >seq95 Length=51392 Score = 105 bits (116), Expect = 1e-17 Identities = 185/269 (69%), Gaps = 3/269 (1%) Strand=Plus/Plus Query 333725 CTTCACGAACTCGGACAGATTTCCCTTGTACTTCTTCAGCTTTAGGTTAGGTTCGTAATG 333784 ||||||||| | | || || |||||||| |||||| || |||||||||| Sbjct 37810 CTTCACGAAAGCTGCCAAGTTACCCTTGTAACAGACCAGCTTC---TTCTGTTCGTAATG 37866 Query 333785 GATAATAGAGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCACGA 333844 | ||| ||| || || | || | ||| || |||||||| || ||||||| ||| Sbjct 37867 GTAGATATCGGTACAGACTTCATCCAAGAATCCAGAGTCGTGAGAAACAATCAAAGACGT 37926 Query 333845 AACGTCCTTAAGGTTGATCAGGTATTCAATCAGCCACCTCACGTTAGACACAGAAAGATG 333904 | || || | || | || ||||| || ||| | || || | ||| ||||| Sbjct 37927 GATCTCGGTATGTTTCTTGAGATATTCTTGCAACCATTTGACATTGGCAACATCGAGATG 37986 Query 333905 GTTGGTCGGCTCGTCAAGAAGTAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGC 333964 |||||| || ||||||||||| || | | ||| | || ||||| ||||| ||||| || Sbjct 37987 GTTGGTAGGTTCGTCAAGAAGGAGAACATCTGCATCCAACAGCATAGCACGGGCAAGTGC 38046 Query 333965 GAGTTTCATTTTCCACCCTCCTGAAAGAG 333993 | ||||||||||| ||||| || |||| Sbjct 38047 CAACTTCATTTTCCAACCTCCAGATAGAG 38075 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102870080283700