Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015-
05-13] 702 sequences; 27,513,354 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq667 134 1e-26
seq96 102 9e-17
>seq667
Length=237617
Score = 134 bits (148), Expect = 1e-26
Identities = 174/238 (73%), Gaps = 2/238 (1%)
Strand=Plus/Plus
Query 41973 ATTTATCGACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTG 42032
||||| |||| || | ||| | ||||||||| || | |||||||||||||||||||||
Sbjct 143357 ATTTACTGACCACCACGTAATCTCAACACCAAGTGGAGAGTGCTCTCCTTTTGAATATTG 143416
Query 42033 TAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGG 42092
||||| | || ||| || | || || | || ||||| ||||| || || || |||||
Sbjct 143417 TAATCTGACAAAGTTCGGCCATCTTCCAATTGTTTACCTGCGAAGATCAGGCGTTGCTGA 143476
Query 42093 TCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCT 42151
|| | ||| | | ||||||||| ||| || ||| | ||| | | | |||||
Sbjct 143477 TCTGGTGGAATTCCTTCCTTGTCCTGGATCTTGGATTTCA-CGTTGTCAATTGTGTCTGA 143535
Query 42152 CGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209
|| || || || | ||||| ||||||||||| | ||||| |||||||||||||||
Sbjct 143536 TGACTCAACTTCCAGTGTGATTGTTTTGCCCGTCAAAGTCTTCACAAAGATTTGCATT 143593
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041
|| || | ||| | || ||| | || | |||||||||||| ||||| |||||||| | |
Sbjct 143594 CCGCCACGTAATCTCAGCACAAGGTGGAGTGTGCTCTCCTTCTGAATGTTGTAATCTGAC 143653
Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101
| ||| || | || || || ||||| ||||| || || || || ||||| || | |||
Sbjct 143654 AAAGTTCGGCCATCTTCCAGTTGCTTTCCAGCAAAGATCAGGCGTTGCTGATCTGGTGGA 143713
Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161
| | |||||| || ||| || ||| | | | | |||||| || || ||
Sbjct 143714 ATCCCCTCCTTATCTTGGATCTTGGATTTCACGTTATCAATCGTGTCTGATGACTCGACT 143773
Query 42162 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| | ||||| || || || || | |||||| |||||||| |||||
Sbjct 143774 TCCAATGTGATCGTCTTTCCGGTCAACGTCTTCACAAAGATCTGCAT 143820
>seq96
Length=163266
Score = 102 bits (112), Expect = 9e-17
Identities = 137/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077
||||| || || |||||||| | || ||| || |||| || || ||||| || |||||
Sbjct 52830 TCCTTCTGGATGTTGTAATCGGACAAAGTACGACCGTCTTCGAGTTGCTTGCCGGCGAAG 52771
Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137
|| || || || ||||| | ||| | || |||||| ||| ||| || |||| |
Sbjct 52770 ATCAGACGTTGTTGGTCAGGTGGGATGCCCTCCTTATCCTGGATCTTGGACTTGACATTG 52711
Query 42138 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197
| | || ||| ||||||||| || | ||||| || || ||||| || ||||| ||
Sbjct 52710 TCGATGGTATCGGACGATTCCACCTCAAGGGTGATCGTCTTACCCGTGAGGGTCTTGACG 52651
Query 42198 AAGATTTGCAT 42208
|||||||||||
Sbjct 52650 AAGATTTGCAT 52640
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543208033307680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |