Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015-
05-13] 702 sequences; 27,513,354 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq698 174 2e-38
>seq698
Length=89367
Score = 174 bits (192), Expect = 2e-38
Identities = 484/736 (66%), Gaps = 6/736 (1%)
Strand=Plus/Minus
Query 93896 CCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT-G 93954
|||| ||||| ||||| || || || || ||| |||||||| || || ||| |||| |
Sbjct 2907 CCCCAACCCTTTTCAATGCTGGTACTCCTCAGCCTCAGATGTCCTCATGCTTCTTGATCG 2848
Query 93955 ACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATC 94014
|| | || | ||| ||| ||||| | || | | ||| ||||| | |||
Sbjct 2847 AC-ATGAAAGAGGACAGTATCGAAGGAATCTATGATACTTTGAAGACTTGTGCCATGATC 2789
Query 94015 TCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTAC 94074
|| || ||| || || ||||| ||| | ||| | || |||| || || |||
Sbjct 2788 TCCAAGACCGCCGGTGGTATCGGTCTCAACATTCACAGAATTCGAGCCACTGGCTCTTAC 2729
Query 94075 ATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAAC 94134
|| |||| || ||||| | |||||||| | || || |||||||| || |||||||||
Sbjct 2728 ATTGGCGGGACTAATGGTTCTTCCAACGGTATTGTTCCCATGCTCCGCGTGTTCAACAAC 2669
Query 94135 GCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTC 94194
| || | ||||| ||||||||||| | | ||| |||| || | || ||
Sbjct 2668 ACTGCTAGATACGTTGACCAGGGTGGCAACAAACGACCAGGTGCTTTTGCCATTTACCTT 2609
Query 94195 GAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGAT 94254
||||| |||||| ||||||| | ||| | ||||| || |||||||||||||| ||
Sbjct 2608 GAGCCATGGCACTCGGACGTTTTCGAATTCCTTGACCTCCGCAAGAACCACGGCAAGGAA 2549
Query 94255 CTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGC 94314
| | || | ||||| ||||| ||||| ||| | || || ||||||||||||||
Sbjct 2548 GAAGTACGAGCTCGTGACCTTTTCTATGCTCTTTGGATTCCTGATCTTTTTATGAAACGA 2489
Query 94315 GTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC 94374
|| || || || | |||| | | || || || |||| ||| || || |||||
Sbjct 2488 GTTGAAAAGAATCAAGAGTGGACTTTGTTCTGCCCTCATGAGGCTCCAGGTCTAGCCGAC 2429
Query 94375 GTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAA-TCGCAGGGCAAGG-CCA 94432
|| | |||| ||||| | | | ||||| |||||| | |||| || | |
Sbjct 2428 GTCTATGGAGATGAATTTGAGGTCCTTTATGCCAAATACGAACAAGAGGGGCGTGGTCGA 2369
Query 94433 GGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGG 94492
||| ||| | ||| ||||| ||| | ||| | || | |||| ||||| |
Sbjct 2368 CGAA--CCATGAAAGCTCAAAAGCTTTGGTACGCTATCCTCGAGGCACAGACCGAGACTG 2311
Query 94493 GTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCG 94552
| | || | ||| | | |||||| | |||| ||| ||| || || || | |
Sbjct 2310 GAAATCCATTCATGCTCTACAAGGATGCCTGCAACCGAAAGAGCAATCAAAAGAACTTGG 2251
Query 94553 GGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGA 94612
| ||||||||||| || |||| ||||| ||| | ||||| ||| |||| || ||
Sbjct 2250 GTACTATCAAGAGCTCTAACTTGTGTACCGAAATTATTGAGTACACTGCTCCAGATGAAG 2191
Query 94613 TTGCTGTGTGTAACCT 94628
| ||||| || || ||
Sbjct 2190 TCGCTGTTTGCAATCT 2175
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494718858803920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |