Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq667 96.9 3e-15 seq623 95.1 1e-14 >seq667 Length=237617 Score = 96.9 bits (106), Expect = 3e-15 Identities = 82/101 (81%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| ||||||||||| ||||||| ||| || || ||||||||||| |||| | Sbjct 144139 GACTCCTTCTGAATGTTGTAATCGCTCAGAGTGCGACCATCTTCGAGTTGTTTGCCGGCA 144198 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTC 138521 |||| ||||| |||||||| ||||| || || || ||||| Sbjct 144199 AAGATCAGACGTTGTTGGTCGGGAGGAATGCCCTCCTTGTC 144239 >seq623 Length=266034 Score = 95.1 bits (104), Expect = 1e-14 Identities = 133/183 (73%), Gaps = 4/183 (2%) Strand=Plus/Minus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 ||||||| |||||||||||||||| ||| || ||||| ||||| || |||| | | Sbjct 249707 CCTTTTGGATGTTGTAGTCGCTCAAAGTGCGGCCATCCTCAAGTTGCTTGCCGGCGAAAA 249648 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG--TTTTAATTG 138542 | ||||| |||||||| || || || ||||| ||||| ||| | || | || |||| Sbjct 249647 TCAGACGTTGTTGGTCGGGTGGAATTCCTTCCTTGTC-TTGAATCTTGGACTTGACATTG 249589 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | ||| |||| || |||||||| | || | |||||||| || || || || || Sbjct 249588 -TCGATGGTATCGGATGATTCCACCTCAAGAGTGATGGTTTTACCCGTGAGGGTCTTGAC 249530 Query 138603 AAA 138605 || Sbjct 249529 GAA 249527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496258045297440