Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015-
05-13] 702 sequences; 27,513,354 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq667 111 1e-19
>seq667
Length=237617
Score = 111 bits (122), Expect = 1e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| ||||||| ||||||||| || | || ||| ||||||||||||||||| |
Sbjct 143366 CCACCACGTAATCTCAACACCAAGTGGAGAGTGCTCTCCTTTTGAATATTGTAATCTGAC 143425
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| || || ||| || | ||||| || ||| |||||| || |||||||| || ||
Sbjct 143426 AAAGTTCGGCCATCTTCCAATTGTTTACCTGCGAAGATCAGGCGTTGCTGATCTGGTGGA 143485
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065
|| || ||||||||| ||| || || | |||| || | ||||| | ||| ||
Sbjct 143486 ATTCCTTCCTTGTCCTGGATCTTGGATTTCACGTTG-TCAATTGTGTCTGATGACTCAAC 143544
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
||| | || | |||||||| |||| ||| || ||||| || |||||
Sbjct 143545 TTCCAGTGTGATTGTTTTGCCCGTCAAAGTCTTCACAAAGATTTGCAT 143592
Score = 95.1 bits (104), Expect = 1e-14
Identities = 84/105 (80%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|||||||| || ||||| |||||||||| || |||||| ||| || || ||||| ||
Sbjct 144136 GTAGACTCCTTCTGAATGTTGTAATCGCTCAGAGTGCGACCATCTTCGAGTTGTTTGCCG 144195
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCC 127021
|| |||||| || || || |||||||| |||||||||||||||
Sbjct 144196 GCAAAGATCAGACGTTGTTGGTCGGGAGGAATGCCCTCCTTGTCC 144240
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475496627480480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |