Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015-
05-13] 702 sequences; 27,513,354 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq667 111 1e-19
seq698 82.4 7e-11
>seq667
Length=237617
Score = 111 bits (122), Expect = 1e-19
Identities = 163/226 (72%), Gaps = 6/226 (3%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA- 45184
|||||||| | || || || |||||||| ||||| ||||| |||| || |
Sbjct 143378 CTCAACACCAAGTGGAGAGTGCTCTCCTTTTGAATATTGTAATC--TGACAAAGTTCGGC 143435
Query 45185 -ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTT 45243
||| ||||||||||| |||||| | |||| |||||||| || || ||||| ||||| |
Sbjct 143436 CATCTTCCAATTGTTTACCTGCGAAGATCAGGCGTTGCTGATCTGGTGGAATTCCTTCCT 143495
Query 45244 TATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTA 45302
| || || || || ||| | || | || | ||||| || ||||| ||||| || ||
Sbjct 143496 TGTCCTGGATCTTGGATTTCA-CGTTGTCAATTGTGTCTGATGACTCAACTTCCAGTGTG 143554
Query 45303 ACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATCGCGCGAC 45348
| |||||||| || | ||| || ||||| |||||||| ||| ||
Sbjct 143555 ATTGTTTTGCCCGTCAAAGTCTTCACAAAGATTTGCATTCCGCCAC 143600
Score = 87.8 bits (96), Expect = 2e-12
Identities = 162/233 (70%), Gaps = 6/233 (3%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
||||| || || | |||| ||| || || || || ||||| || || || |||||
Sbjct 143591 ATTCCGCCACGTAATCTCAGCACAAGGTGGAGTGTGCTCTCCTTCTGAATGTTGTAATC- 143649
Query 45171 CTGACGGTTTTAGA--ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228
|||| || | ||| |||| ||| ||||| || | |||| |||||||| || |
Sbjct 143650 -TGACAAAGTTCGGCCATCTTCCAGTTGCTTTCCAGCAAAGATCAGGCGTTGCTGATCTG 143708
Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGAC 45287
| ||||| || || |||||||| || || ||| | || | || | ||||| || |||
Sbjct 143709 GTGGAATCCCCTCCTTATCTTGGATCTTGGATTTCA-CGTTATCAATCGTGTCTGATGAC 143767
Query 45288 TCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|||||||| | || | ||| || ||||| | || || ||||| || |||||
Sbjct 143768 TCGACTTCCAATGTGATCGTCTTTCCGGTCAACGTCTTCACAAAGATCTGCAT 143820
>seq698
Length=89367
Score = 82.4 bits (90), Expect = 7e-11
Identities = 116/163 (71%), Gaps = 0/163 (0%)
Strand=Plus/Minus
Query 123592 TCGAAACACAAGTCGAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGA 123651
|||| |||| ||| || |||| || | |||||||||||| || ||||||||| | |
Sbjct 2331 TCGAGGCACAGACCGAGACTGGAAATCCATTCATGCTCTACAAGGATGCCTGCAACCGAA 2272
Query 123652 AAACCAATCAGAGCAACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAATTATCG 123711
| | |||||| | |||||||| || || || | ||| | || |||||||||| |
Sbjct 2271 AGAGCAATCAAAAGAACTTGGGTACTATCAAGAGCTCTAACTTGTGTACCGAAATTATTG 2212
Query 123712 AATACAGCGATGCCGATCAAGTGGCCGTGTGTAATTTGGCTTC 123754
| |||| | | | ||| |||| || || || ||| | |||||
Sbjct 2211 AGTACACTGCTCCAGATGAAGTCGCTGTTTGCAATCTCGCTTC 2169
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451999233671920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |