Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015-
05-13] 702 sequences; 27,513,354 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq96 134 3e-26
seq667 127 5e-24
seq623 111 4e-19
>seq96
Length=163266
Score = 134 bits (148), Expect = 3e-26
Identities = 161/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467
|||||| | ||||||||||| || || || ||||| |||| |||||| || | ||||||
Sbjct 52861 TCGAAGACGGAGGACAAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAATCGGACAAAGT 52802
Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527
| || ||||| || ||||| ||||||||||| ||||| || ||||| || || ||
Sbjct 52801 ACGACCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGACGTTGTTGGTCAGGTGGGATGCC 52742
Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587
|| ||||| ||||| ||| || |||| ||| || | | ||| || || |
Sbjct 52741 CTCCTTATCCTGGATCTTGGACTTGACATTGTCGATGGTATCGGACGATTCCACCTCAAG 52682
Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|||||||||||||||||||| || || || || |||||
Sbjct 52681 GGTGATCGTCTTACCCGTGAGGGTCTTGACGAAGATTTG 52643
Score = 84.2 bits (92), Expect = 5e-11
Identities = 76/96 (79%), Gaps = 0/96 (0%)
Strand=Plus/Plus
Query 200935 CTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAG 200994
|| ||||||||||| ||||| | ||||| || | |||||| ||||||||||| |||||
Sbjct 52766 CTGATCTTCGCCGGCAAGCAACTCGAAGACGGTCGTACTTTGTCCGATTACAACATCCAG 52825
Query 200995 AAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 201030
|| || || || ||||||||||| | | ||||||
Sbjct 52826 AAGGAATCCACCCTTCACCTTGTCCTCCGTCTTCGA 52861
>seq667
Length=237617
Score = 127 bits (140), Expect = 5e-24
Identities = 156/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
|||||| ||||||||||| || |||||| || | |||||| || | |||||| | ||
Sbjct 143605 TCTCAGCACAAGGTGGAGTGTGCTCTCCTTCTGAATGTTGTAATCTGACAAAGTTCGGCC 143664
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
||||||||| |||||||| || ||||| || || ||||| || || ||| || ||
Sbjct 143665 ATCTTCCAGTTGCTTTCCAGCAAAGATCAGGCGTTGCTGATCTGGTGGAATCCCCTCCTT 143724
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
|| || ||||| |||||| || | ||||||| || || || ||||| |||||
Sbjct 143725 ATCTTGGATCTTGGATTTCACGTTATCAATCGTGTCTGATGACTCGACTTCCAATGTGAT 143784
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|||||| || || | || |||||||| || ||
Sbjct 143785 CGTCTTTCCGGTCAACGTCTTCACAAAGATCTG 143817
Score = 107 bits (118), Expect = 5e-18
Identities = 143/199 (72%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | |||||||| |||||||| |||||||| || | |||||| || || |||
Sbjct 144112 CGAAGGCGGAGGACAAGATGGAGAGTAGACTCCTTCTGAATGTTGTAATCGCTCAGAGTG 144171
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| |||||||| || || || ||||| ||||| ||||| || ||||| ||| ||| ||
Sbjct 144172 CGACCATCTTCGAGTTGTTTGCCGGCAAAGATCAGACGTTGTTGGTCGGGAGGAATGCCC 144231
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||||||||| ||| || |||| || || | | ||| || || |
Sbjct 144232 TCCTTGTCCTGAATCTTGGACTTGACATTGTCGATAGTATCGGAAGATTCGACCTCAAGA 144291
Query 199589 GTGATCGTCTTACCCGTGA 199607
||||| ||||| || ||||
Sbjct 144292 GTGATGGTCTTTCCGGTGA 144310
Score = 100 bits (110), Expect = 7e-16
Identities = 142/200 (71%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||||||||| || || || ||||| |||| |||||| || | | ||| | |||||
Sbjct 143837 AGGACAAGGTGAAGGGTAGATTCCTTCTGGATGTTGTAATCTGAGAGAGTACGGCCATCC 143896
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|||| ||||| || ||||| |||||||| || || || || || || || |||
Sbjct 143897 TCCAATTGCTTGCCAGCGAAAATGAGACGTTGTTGATCGGGTGGGATACCCTCCTTGTCC 143956
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| |||||| ||| ||| |||| ||| |||| | || || || | ||||| |||
Sbjct 143957 TGGATCTTTGACTTGACGTTGTCGATGGTATCTGAAGACTCGACCTCAAGGGTGATGGTC 144016
Query 199598 TTACCCGTGAGAGTTTTCAC 199617
|| || || ||||| || ||
Sbjct 144017 TTGCCAGTAAGAGTCTTGAC 144036
>seq623
Length=266034
Score = 111 bits (122), Expect = 4e-19
Identities = 133/181 (73%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499
||||||||| ||||||||| |||||| | ||||| || || ||||| |||||||| |
Sbjct 249707 CCTTTTGGATGTTGTAGTCGCTCAAAGTGCGGCCATCCTCAAGTTGCTTGCCGGCGAAAA 249648
Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATT 199559
| ||||| || ||||| || ||||||||| || |||||||| ||| || |
Sbjct 249647 TCAGACGTTGTTGGTCGGGTGGAATTCCTTCCTTGTCTTGAATCTTGGACTTGACATTGT 249588
Query 199560 CGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAA 199619
||| ||| || | || ||| || || | ||||| || ||||||||||| || || || |
Sbjct 249587 CGATGGTATCGGATGATTCCACCTCAAGAGTGATGGTTTTACCCGTGAGGGTCTTGACGA 249528
Query 199620 A 199620
|
Sbjct 249527 A 249527
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178910996337034
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |