Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015-
05-13] 702 sequences; 27,513,354 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq96 120 3e-22
seq667 109 6e-19
seq623 95.1 1e-14
>seq96
Length=163266
Score = 120 bits (132), Expect = 3e-22
Identities = 141/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462
||||| ||||| ||||| ||||| | ||| || |||| ||||| ||||||||||||||
Sbjct 52830 TCCTTCTGGATGTTGTAATCGGACAAAGTACGACCGTCTTCGAGTTGCTTGCCGGCGAAG 52771
Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522
|||| || || ||||| | || | || |||||| ||| |||||| ||||| |
Sbjct 52770 ATCAGACGTTGTTGGTCAGGTGGGATGCCCTCCTTATCCTGGATCTTGGACTTGACATTG 52711
Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582
| | || ||| ||||||||| || | ||||| || || ||||| || || || ||
Sbjct 52710 TCGATGGTATCGGACGATTCCACCTCAAGGGTGATCGTCTTACCCGTGAGGGTCTTGACG 52651
Query 46583 AAGATTTGCAT 46593
|||||||||||
Sbjct 52650 AAGATTTGCAT 52640
>seq667
Length=237617
Score = 109 bits (120), Expect = 6e-19
Identities = 163/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| || | ||| | |||||||| || | || ||||||||||| |||||||| || ||
Sbjct 143366 CCACCACGTAATCTCAACACCAAGTGGAGAGTGCTCTCCTTTTGAATATTGTAATCTGAC 143425
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
| ||| || | || || | || || || ||||| |||| ||| ||||| || | ||
Sbjct 143426 AAAGTTCGGCCATCTTCCAATTGTTTACCTGCGAAGATCAGGCGTTGCTGATCTGGTGGA 143485
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 46545
| | ||||||||| |||||| || | ||| | | | ||||| || || ||
Sbjct 143486 ATTCCTTCCTTGTCCTGGATCTTGGATTTCA-CGTTGTCAATTGTGTCTGATGACTCAAC 143544
Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594
|||| ||||| ||||||||||||| || || |||||||||||||||
Sbjct 143545 TTCCAGTGTGATTGTTTTGCCCGTCAAAGTCTTCACAAAGATTTGCATT 143593
>seq623
Length=266034
Score = 95.1 bits (104), Expect = 1e-14
Identities = 130/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463
|||||||||| ||||||||| | |||||| | || || || |||||||||||||| |
Sbjct 249707 CCTTTTGGATGTTGTAGTCGCTCAAAGTGCGGCCATCCTCAAGTTGCTTGCCGGCGAAAA 249648
Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523
||| || || ||||||| || | | |||||||| ||||| ||||| |
Sbjct 249647 TCAGACGTTGTTGGTCGGGTGGAATTCCTTCCTTGTCTTGAATCTTGGACTTGACATTGT 249588
Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583
| | || ||| |||||||| || | ||||||||||| ||||| || || || || |
Sbjct 249587 CGATGGTATCGGATGATTCCACCTCAAGAGTGATGGTTTTACCCGTGAGGGTCTTGACGA 249528
Query 46584 AG 46585
||
Sbjct 249527 AG 249526
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565233440033040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |