Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq689 192 6e-44 seq667 96.9 3e-15 seq623 96.9 3e-15 seq96 86.0 6e-12 >seq689 Length=208963 Score = 192 bits (212), Expect = 6e-44 Identities = 561/848 (66%), Gaps = 21/848 (2%) Strand=Plus/Plus Query 132604 TTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGC 132663 ||||| || || || || |||||||| || || || ||||| | | ||| ||| Sbjct 93919 TTTTGGTAATCACCAACACGCTTCTCAAAGAAGTTTGTCTTTCCAGCAAGGGAGATGTTT 93978 Query 132664 GTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTT---GGTGCCGATCAGGTCGACG 132720 ||| || || || ||||||| | ||||||| ||| | | |||| || ||| | Sbjct 93979 TCCATGAAGTCGAATGGGTTGGTGGAGTTGTAGAACTTCTGGTTACCGAG-AG--CGATG 94035 Query 132721 AGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAG 132779 || || |||||||| || ||||||||||||||| |||| | | || | | | || || Sbjct 94036 AGGAGTCTGTCGGCAACAAACTCGATGTATTGCTTCATGAGAGTAGCGTTCATG-CCGAG 94094 Query 132780 CAGACGCACC-GGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGA 132838 |||| ||| || || || || || | || ||| ||||| | || || ||||||| Sbjct 94095 GAGAC-CACATGGAAGAGCATCAGTCAAGAATTCTTGTTCGATTTCAACAGCCTCGGTGA 94153 Query 132839 CGATTTCCCTAACGCGCGCCG-CGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAA 132897 || || | | | | || | ||| |||| | || ||| | | ||| Sbjct 94154 TAATGTCTTGGATGACCTTCTTCGATGGGCGGTTGTTA-AGGTGAGAGAAGAGGAGGCAG 94212 Query 132898 GCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCG 132957 ||||| || |||| ||||| || | || || | |||||| ||| || | || Sbjct 94213 GCAAAATCAGTGTGCAGACCCTCATCACGAGAGATCAATTCGTTAGAGAATGTAAGACCC 94272 Query 132958 GGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACG 133017 ||||| | ||||| || || | ||| || |||| || ||| ||||| ||||||| Sbjct 94273 GGCATCATACCGCGCTTCTTCAACCAGAAGATGGATGCAAAAGAACCCGAGAAGAAGATA 94332 Query 133018 CCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTG-CTGGCGAT 133076 ||||| || || || ||||| || || || | |||| | ||||| | || | || Sbjct 94333 CCCTCAACCGCAGCAAAAGCAACGAGACGTTGAGCGAAACAAGATTCTTGGTCTTGA-AT 94391 Query 133077 CCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAA 133136 |||| | | ||||| |||||||| | || || || || || || ||||| | || Sbjct 94392 CCAGTGAATGGCCCAATCGGCCTTCTTGCGGATACATGGGATGGTATCAATGGCATCGAA 94451 Query 133137 CAAACGGAGTTTCTCTTCCGAGGAACGC--ACGTAGGTGTCGATGAGGGTCGAATACATT 133194 ||| | | |||||| | || | | ||| ||||||||||| || || | Sbjct 94452 CAA--GTATGTTCTCTGCTTTGGCTCCTTAATGTATGTGTCGATGAGAAGAGAGTATGTC 94509 Query 133195 TCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACC 133254 || ||||| | ||||||||| ||| || |||||||| ||||| || || || ||| Sbjct 94510 TCTGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGTGCTTCTGGGACC 94569 Query 133255 TGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCG 133314 || ||||| || |||||| ||||||| || || || || || || || ||||| Sbjct 94570 TGAACTTCACCAGAGAAACGTTCGACCAAGTTCTCATTCACAATACCATCTGAAGCGGCA 94629 Query 133315 AAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCG---CTCCCAG 133371 || ||||| || || || |||||| | |||||| | ||| || | ||| | |||| Sbjct 94630 AAGAAGGCAAGAACATGGGAGATGAAGTAGCGCTCATCGTCATTGAGGCGATTGTTCCAG 94689 Query 133372 TCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTT 133431 ||| | ||||| ||||| || | ||| ||| | ||||| || || || || || || Sbjct 94690 TCGTGAAGATCCTTTGACAGATCGATCTCTTCGGCAGTCCAGAATGAGGCTTCAGCCTTC 94749 Query 133432 TTGTACAT 133439 |||||||| Sbjct 94750 TTGTACAT 94757 >seq667 Length=237617 Score = 96.9 bits (106), Expect = 3e-15 Identities = 147/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 38254 TCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGC 38313 |||| || || || || ||||| ||||||||| | || |||||| | | || | | | Sbjct 144038 TCGTCAAGACTCTTACTGGCAAGACCATCACCCTTGAGGTCGAGTCTTCAGATACCATCG 143979 Query 38314 A-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 | |||| | || ||| |||| ||||| ||||| || || |||| ||||| || ||| Sbjct 143978 ACAACG-TCAAGTCAAAGATCCAGGACAAGGAGGGTATCCCACCCGATCAACAACGTCTC 143920 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 |||| ||| ||||| || |||| || | || || ||| || ||||||||||| ||| Sbjct 143919 ATTTTCGCTGGCAAGCAATTGGAGGATGGCCGTACTCTCTCAGATTACAACATCCAGAAG 143860 Query 38433 GAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||| | || || || | || || ||| Sbjct 143859 GAATCTACCCTTCACCTTGTCCTTCGT 143833 >seq623 Length=266034 Score = 96.9 bits (106), Expect = 3e-15 Identities = 130/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || |||||||| ||||||||||| | || || || | |||| | | | Sbjct 249527 TTCGTCAAGACCCTCACGGGTAAAACCATCACTCTTGAGGTGGAATCATCCGATACCATC 249586 Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 | | | || || || | ||||| || |||||||| |||||||||| || || Sbjct 249587 GACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGAATTCCACCCGACCAACAACGTCTG 249646 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 |||| ||| ||||| || || || || | ||||| | | ||||||||||||||||||| Sbjct 249647 ATTTTCGCCGGCAAGCAACTTGAGGATGGCCGCACTTTGAGCGACTACAACATCCAAAAG 249706 Query 38433 G 38433 | Sbjct 249707 G 249707 >seq96 Length=163266 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || |||||||| || || |||||| | || || || | || Sbjct 52640 ATGCAAATCTTCGTCAAGACCCTCACGGGTAAGACGATCACCCTTGAGGTGGAATCGTCC 52699 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | | || || |||| || || ||||| || || | |||||| Sbjct 52700 GATACCATCGACAATGTCAAGTCCAAGATCCAGGATAAGGAGGGCATCCCACCTGACCAA 52759 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || || || | ||| ||||| || || || |||| || || | ||| |||||| Sbjct 52760 CAACGTCTGATCTTCGCCGGCAAGCAACTCGAAGACGGTCGTACTTTGTCCGATTACAAC 52819 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| |||||| | || || || | || || ||| | |||| || Sbjct 52820 ATCCAGAAGGAATCCACCCTTCACCTTGTCCTCCGTCTTCGAGGTGG 52866 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500168410983680