Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq623 125 3e-23 seq667 122 3e-22 seq681 96.9 1e-14 >seq623 Length=266034 Score = 125 bits (138), Expect = 3e-23 Identities = 123/159 (77%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 391059 TTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACATT 391118 ||||| || || || || |||||||| || |||||||| || |||||||| |||| ||| Sbjct 249527 TTCGTCAAGACCCTCACGGGTAAAACCATCACTCTTGAGGTGGAATCATCCGATACCATC 249586 Query 391119 GAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTA 391178 || | | || || |||||||| |||||||||||||| || || ||||||||| | Sbjct 249587 GACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGAATTCCACCCGACCAACAACGTCTG 249646 Query 391179 ATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTG 391217 |||||| | || || |||||||| ||||| | |||||| Sbjct 249647 ATTTTCGCCGGCAAGCAACTTGAGGATGGCCGCACTTTG 249685 >seq667 Length=237617 Score = 122 bits (134), Expect = 3e-22 Identities = 157/217 (72%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || || || || || |||| || ||||| || || || || ||||| ||||| Sbjct 143593 AATGCAAATCTTTGTGAAGACTTTGACGGGCAAAACAATCACACTGGAAGTTGAGTCATC 143534 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 || | ||||| | ||| || || || || |||||||||||||| || ||||| Sbjct 143533 AGACACAATTGACAACGTGAAATCCAAGATCCAGGACAAGGAAGGAATTCCACCAGATCA 143474 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||||| | || ||| |||| |||||| | |||||||| |||||||| | ||||| || Sbjct 143473 GCAACGCCTGATCTTCGCAGGTAAACAATTGGAAGATGGCCGAACTTTGTCAGATTACAA 143414 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGA 391265 |||| | ||||| || || ||||| || || ||| Sbjct 143413 TATTCAAAAGGAGAGCACTCTCCACTTGGTGTTGAGA 143377 Score = 89.7 bits (98), Expect = 2e-12 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || || || |||| || || || || || | || || || ||||| Sbjct 143820 ATGCAGATCTTTGTGAAGACGTTGACCGGAAAGACGATCACATTGGAAGTCGAGTCATCA 143761 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||||| | ||| || || ||||||||||| || ||||| || ||||| Sbjct 143760 GACACGATTGATAACGTGAAATCCAAGATCCAAGATAAGGAGGGGATTCCACCAGATCAG 143701 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||||| | || || | || || ||||| |||||||| |||||||| | ||||| || Sbjct 143700 CAACGCCTGATCTTTGCTGGAAAGCAACTGGAAGATGGCCGAACTTTGTCAGATTACAAC 143641 Query 391230 ATTGATAAGGATGCAACACTTCAC 391253 ||| | ||||| ||||| ||| Sbjct 143640 ATTCAGAAGGAGAGCACACTCCAC 143617 Score = 84.2 bits (92), Expect = 9e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 391060 TCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACATTG 391119 |||| || || || ||||| || || || || ||||| || || || || |||| ||| | Sbjct 144038 TCGTCAAGACTCTTACTGGCAAGACCATCACCCTTGAGGTCGAGTCTTCAGATACCATCG 143979 Query 391120 AAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAA 391179 | | || ||| || || || ||||| || || || || |||||||||||| | | Sbjct 143978 ACAACGTCAAGTCAAAGATCCAGGACAAGGAGGGTATCCCACCCGATCAACAACGTCTCA 143919 Query 391180 TTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGG 391239 ||||| | || || ||| | || ||||| | ||| | | ||||| || || | |||| Sbjct 143918 TTTTCGCTGGCAAGCAATTGGAGGATGGCCGTACTCTCTCAGATTACAACATCCAGAAGG 143859 Query 391240 ATGCAACACTTCAC 391253 | | || |||||| Sbjct 143858 AATCTACCCTTCAC 143845 >seq681 Length=139357 Score = 96.9 bits (106), Expect = 1e-14 Identities = 163/236 (69%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 451217 TATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAA 451276 ||||| || ||| || | ||| | |||||||| ||||| || | || | || || Sbjct 109737 TATAAGGGAGAACAGAAGTCGTTTACCCCTGAAGAGATTTCTTCCTTCATTTTGACGAAG 109796 Query 451277 ATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTT 451336 |||| || || ||||| |||| | ||| |||| | | || || | || || Sbjct 109797 ATGAGGGAGACCGCAGAGGCATATCTCGGTGGAACAGTCAACAACGCTGTCGTCACAGTC 109856 Query 451337 CCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGT 451396 || ||||| |||||||| | || || ||||| || || || ||||| | ||||||||| Sbjct 109857 CCAGCTTACTTCAATGACTCTCAGCGTCAAGCCACCAAGGACGCAGGTCTCATTGCTGGT 109916 Query 451397 TTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACT 451452 || || || || || || || || || || ||||||||||| | ||||| || || Sbjct 109917 TTGAACGTGCTCCGTATCATCAACGAGCCAACAGCAGCTGCGATTGCATACGGTCT 109972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975700629647816