Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015-
05-13] 702 sequences; 27,513,354 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq623 125 3e-23
seq667 122 3e-22
seq681 96.9 1e-14
>seq623
Length=266034
Score = 125 bits (138), Expect = 3e-23
Identities = 123/159 (77%), Gaps = 0/159 (0%)
Strand=Plus/Plus
Query 391059 TTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACATT 391118
||||| || || || || |||||||| || |||||||| || |||||||| |||| |||
Sbjct 249527 TTCGTCAAGACCCTCACGGGTAAAACCATCACTCTTGAGGTGGAATCATCCGATACCATC 249586
Query 391119 GAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTA 391178
|| | | || || |||||||| |||||||||||||| || || ||||||||| |
Sbjct 249587 GACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGAATTCCACCCGACCAACAACGTCTG 249646
Query 391179 ATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTG 391217
|||||| | || || |||||||| ||||| | ||||||
Sbjct 249647 ATTTTCGCCGGCAAGCAACTTGAGGATGGCCGCACTTTG 249685
>seq667
Length=237617
Score = 122 bits (134), Expect = 3e-22
Identities = 157/217 (72%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108
|||| | || || || || || |||| || ||||| || || || || ||||| |||||
Sbjct 143593 AATGCAAATCTTTGTGAAGACTTTGACGGGCAAAACAATCACACTGGAAGTTGAGTCATC 143534
Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168
|| | ||||| | ||| || || || || |||||||||||||| || |||||
Sbjct 143533 AGACACAATTGACAACGTGAAATCCAAGATCCAGGACAAGGAAGGAATTCCACCAGATCA 143474
Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228
||||| | || ||| |||| |||||| | |||||||| |||||||| | ||||| ||
Sbjct 143473 GCAACGCCTGATCTTCGCAGGTAAACAATTGGAAGATGGCCGAACTTTGTCAGATTACAA 143414
Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGA 391265
|||| | ||||| || || ||||| || || |||
Sbjct 143413 TATTCAAAAGGAGAGCACTCTCCACTTGGTGTTGAGA 143377
Score = 89.7 bits (98), Expect = 2e-12
Identities = 142/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || || || || || |||| || || || || || | || || || |||||
Sbjct 143820 ATGCAGATCTTTGTGAAGACGTTGACCGGAAAGACGATCACATTGGAAGTCGAGTCATCA 143761
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| | ||||| | ||| || || ||||||||||| || ||||| || |||||
Sbjct 143760 GACACGATTGATAACGTGAAATCCAAGATCCAAGATAAGGAGGGGATTCCACCAGATCAG 143701
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
||||| | || || | || || ||||| |||||||| |||||||| | ||||| ||
Sbjct 143700 CAACGCCTGATCTTTGCTGGAAAGCAACTGGAAGATGGCCGAACTTTGTCAGATTACAAC 143641
Query 391230 ATTGATAAGGATGCAACACTTCAC 391253
||| | ||||| ||||| |||
Sbjct 143640 ATTCAGAAGGAGAGCACACTCCAC 143617
Score = 84.2 bits (92), Expect = 9e-11
Identities = 135/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 391060 TCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACATTG 391119
|||| || || || ||||| || || || || ||||| || || || || |||| ||| |
Sbjct 144038 TCGTCAAGACTCTTACTGGCAAGACCATCACCCTTGAGGTCGAGTCTTCAGATACCATCG 143979
Query 391120 AAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAA 391179
| | || ||| || || || ||||| || || || || |||||||||||| | |
Sbjct 143978 ACAACGTCAAGTCAAAGATCCAGGACAAGGAGGGTATCCCACCCGATCAACAACGTCTCA 143919
Query 391180 TTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGG 391239
||||| | || || ||| | || ||||| | ||| | | ||||| || || | ||||
Sbjct 143918 TTTTCGCTGGCAAGCAATTGGAGGATGGCCGTACTCTCTCAGATTACAACATCCAGAAGG 143859
Query 391240 ATGCAACACTTCAC 391253
| | || ||||||
Sbjct 143858 AATCTACCCTTCAC 143845
>seq681
Length=139357
Score = 96.9 bits (106), Expect = 1e-14
Identities = 163/236 (69%), Gaps = 0/236 (0%)
Strand=Plus/Plus
Query 451217 TATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAA 451276
||||| || ||| || | ||| | |||||||| ||||| || | || | || ||
Sbjct 109737 TATAAGGGAGAACAGAAGTCGTTTACCCCTGAAGAGATTTCTTCCTTCATTTTGACGAAG 109796
Query 451277 ATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTT 451336
|||| || || ||||| |||| | ||| |||| | | || || | || ||
Sbjct 109797 ATGAGGGAGACCGCAGAGGCATATCTCGGTGGAACAGTCAACAACGCTGTCGTCACAGTC 109856
Query 451337 CCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGT 451396
|| ||||| |||||||| | || || ||||| || || || ||||| | |||||||||
Sbjct 109857 CCAGCTTACTTCAATGACTCTCAGCGTCAAGCCACCAAGGACGCAGGTCTCATTGCTGGT 109916
Query 451397 TTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACT 451452
|| || || || || || || || || || ||||||||||| | ||||| || ||
Sbjct 109917 TTGAACGTGCTCCGTATCATCAACGAGCCAACAGCAGCTGCGATTGCATACGGTCT 109972
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975700629647816
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |