Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq698 277 2e-69 seq5 122 1e-22 >seq698 Length=89367 Score = 277 bits (306), Expect = 2e-69 Identities = 1076/1670 (64%), Gaps = 41/1670 (2%) Strand=Plus/Plus Query 109376 TAAATTGGATTGGTCGAGCTTTCGCCTTCGAGCGAAGATAATACATACCCGTTTTGAGAC 109435 ||||||| |||||| ||| ||| | | ||| ||||| ||||| || || ||||||| Sbjct 1258 TAAATTGAATTGGTGCAGCAGCAGCCATGGTGCGGAGATAGTACATTCCAGTCTTGAGAC 1317 Query 109436 CAGCCTTCCATGCGTACATATGCATTGAAGAGAGTTTGGAAAGTGTCGGACTCTCCATAA 109495 | ||||||| || | ||||| |||| || |||| | || || || ||| Sbjct 1318 CGAGCTTCCATCCGGCGAAGTGCATGGAAGTGATTTTGCCCATGGTTGGCTCCTTCATGT 1377 Query 109496 ACAAGTTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGA 109555 | ||||| || ||||| ||||| ||||| ||| || ||||| ||||| | | | Sbjct 1378 GAATGTTCAATGATTGAGATTGATCAATGAAAGCACCGCGGTCAGCAGCCATTTGAACAA 1437 Query 109556 TACACTTTTGGCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGT 109615 | |||||| ||||||||||| |||||||| | | |||||||||| ||||| | Sbjct 1438 TTTGACGTTGGCTTATTTCCCAGACGGTCTTGTATAGAGCCTTGATATCAGTAGGAATAT 1497 Query 109616 CCACGATGTTTTGAATAGAGCCACCAGCCTTCACCATGAGATCCTTCATCTCTTTCGACC 109675 || | |||||| || ||||||| || || | |||||| | | |||| Sbjct 1498 TAGGAATATCTTGAATCGAACCACCAGAAGCGACAATTCTGTTCTTCATGTTATCTGACC 1557 Query 109676 AGAGACCGACCTTTTTGAGAT-CGTCAACAAG-ATGCTTGTTGACCACGACAAATTCACC 109733 | ||||| | || |||| | | | |||| ||| |||||| || || || || Sbjct 1558 ATAGACCAAGGTTGACAAGATCCTTGAGCAAGTATG--GGTTGACGACTTGGAACTCTCC 1615 Query 109734 AGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCC 109793 ||| | ||| || ||| ||||| | ||||| || || || ||||||||||| || Sbjct 1616 AGCCAAGACGCGACGAGAGTAAATGTTTGATGTGTATGGCTCAAAGCACTCATTGTTACC 1675 Query 109794 TAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACC 109853 || || || | || ||||| || ||||| ||||| | | |||| ||| || | ||| Sbjct 1676 AAGAATCTGCGAGGTTGAAGCAGTAGGCATTGGAGCAACCAAAAGAGAGTTGCGAATACC 1735 Query 109854 CTTCGTCTTTACCCGCTCACGCATTGCG----TCCCAATCATAACGACCACTAAATTTAG 109909 | ||| | ||| || ||| | ||||| || || || || | | Sbjct 1736 AT---GCTTGGCGATATCA-GCCTTGAGGCTCTCCCAGTCCCAAAGATCA------GTTG 1785 Query 109910 TCTCACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAAC 109969 || ||| |||||| || |||||| | || | | | | || |||||| | | Sbjct 1786 GCTTGACATTCCACATGTCATATTGAAGGATGCCTTGGGAAACTGGTGAACCCGCGTATG 1845 Query 109970 TCTCGTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACA 110029 ||||||| | |||| | | || | || | | || || || |||||||| | Sbjct 1846 TCTCGTAGGTTCCCTGCTCTTGAGCAAGCTGGCAGGACATAGTTAAAGCAGCATGATAGA 1905 Query 110030 TAGTCTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCAC 110089 | |||||||| || |||| |||| | |||| ||| | |||| || ||||||| Sbjct 1906 TGGTCTCAAAGATCTGAGTGTTCAATTGACGAGCCTCGGGAGAGTCAAAAGGAAGACGTA 1965 Query 110090 AAAGAATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGT 110149 | | || |||| || |||||||| ||||| ||||||| || ||||| ||| | Sbjct 1966 ATTTGAGGAATGCATCTGCGAGACCCTGGACACCAAGACCAACTGGACGATGACGCATAT 2025 Query 110150 TAGAGCGTCGAGC-AGTTTCT---ACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGA 110205 | || || || | |||| || |||||| ||||| ||||||||| || | | Sbjct 2026 T---GC-TCTTGCGTGCTTCTGGCACTGGGTAATAGTTGACATCGATGACCTTGTTCAAA 2081 Query 110206 TTCTTCGTCACAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCC 110265 || || || || || ||||||| | ||||| || | | || | Sbjct 2082 TTGCGAGTGACCACCTGGACGACCCGGTGGAGTTCCCCAAAATCGTAC--TCGCCACTTC 2139 Query 110266 TT--ATTGACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTT 110323 || || ||| | || |||| | || || |||||||| |||| || ||| Sbjct 2140 TTTCATCAACAAAGGCTGGAAGAGAGAGGGAAGCGAGATTGCAAACAGCGACTTCATCTG 2199 Query 110324 TGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCT 110383 | ||||| || | |||||| ||||||||||| || ||||| || ||||||||||| Sbjct 2200 GAGCAGTGTACTCAATAATTTCGGTACACAAGTTAGAGCTCTTGATAGTACCCAAGTTCT 2259 Query 110384 TCTGATT-CGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCC 110442 | ||||| | ||| | |||||| |||||||| ||||||||| |||| | ||||| || Sbjct 2260 TTTGATTGCTCTTTCG-GTTGCAGGCATCCTTGTAGAGCATGAATGGATTTCCAGTCTCG 2318 Query 110443 GTCTGTGACTTGAGAATGGCCTTCCATACATCGGCGGCGGGGACAGTTGCGT-TAGCGAG 110501 ||||||| || ||| || || | ||| | | || | ||| ||| | | | Sbjct 2319 GTCTGTGCCTCGAGGATAGCGTACCAAAGCTTTTGAGCTTTCATGGTT-CGTCGACCACG 2377 Query 110502 ACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAG 110561 || || | ||||| |||| || | | |||||||||| | ||| || || || | || Sbjct 2378 CCCCTCTTGTTCGTATTTGGCATAAAGGACCTCAAATTCATCTCCATAGACGTCGGCTAG 2437 Query 110562 ACCCTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCAT 110621 ||| |||| | || ||||| | | ||| | | | || ||||| | ||||| Sbjct 2438 ACCTGGAGCCTCATGAGGGCAGAACAAAGTCCACTCTTGATTCTTTTCAACTCGTTTCAT 2497 Query 110622 GAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACC 110681 || || ||||||||||| | || ||||||||||||| || | ||||| | || Sbjct 2498 AAAAAGATCAGGAATCCAAAGAGCATAGAAAAGGTCACGAGCTCGTACTTCTTCCTTGCC 2557 Query 110682 TTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGAC 110741 ||||| ||| || || | || || | | |||||||||||||| || || || | Sbjct 2558 GTGGTTCTTGCGGAGGTCAAGGAATTCGAAAACGTCCGAGTGCCATGGCTCAAGGTAAAT 2617 Query 110742 AGCGATGGATCC----CTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGA 110797 || | | || | | | | || |||||| ||| || | || ||| |||| Sbjct 2618 GGCAAAAGCACCTGGTCGTTTGTTG-CCACCCTGGTCAACGTATCTAGCAGTGTTGTTGA 2676 Query 110798 AGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACT 110857 | || | |||||| |||| ||| || | ||| |||||| || || | ||| || Sbjct 2677 ACACGCGGAGCATGGGAACAATACCGTTGGAAGAACCATTAGTCCCGCCAATGTAAGAGC 2736 Query 110858 TATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTG 110917 | |||| ||||| ||| || | | ||| |||||||| || ||| || | Sbjct 2737 CAGTGGCTCGAATTCTGTGAATGTTGAGACCGATACCACCGGCGGTCTTGGAGATCATGG 2796 Query 110918 CAC-ACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGA 110976 ||| | ||| | | ||| |||| || || || || || | || || | || | Sbjct 2797 CACAAGTCT-TCAAAGTATCATAGATTCCTTCGATACTGTCCTCTTTCATGTCGATCAAG 2855 Query 110977 AAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGG 111026 ||||| || ||||||||||| |||| || || |||||||| || || || Sbjct 2856 AAGCATGAGGACATCTGAGGCTGAGGAGTACCAGCATTGAAAAGGGTTGG 2905 >seq5 Length=68142 Score = 122 bits (134), Expect = 1e-22 Identities = 282/416 (68%), Gaps = 17/416 (4%) Strand=Plus/Minus Query 11502 ACGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGC 11561 |||||| || ||||| || || | | ||| ||| | || ||| | ||| ||| | Sbjct 61149 ACGATCAAATCGACCAGGTCGCATCAAGGCACGATCCAAAACATCCGGTCTGTTGGTACC 61090 Query 11562 GGCAATGACTACAATGCCAG--TCTCAT-TGTCGAAACCGTCCATTTCTGTGAGAAGCTG 11618 ||| || ||||| | | ||| || | | ||| ||||||||||| || | | ||| Sbjct 61089 GGC---GAGTACAACGACTTGTTCTGATGTATTGAACCCGTCCATTTCCGTCAAGATCTG 61033 Query 11619 GTTGATCGTCTGTTCACGCTCATCGTTGGAGGGCATACCACCT---GC--CGAACGCTTC 11673 ||||| ||| ||| ||||||||||| | || | | | | || ||| || | Sbjct 61032 GTTGAGAGTCGCTTCGCGCTCATCGTT--ACCGCCTCCAAAATTTTGCTTCGATCGTGAC 60975 Query 11674 TTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGT 11733 || |||| || ||||| ||||| ||||| | |||||| ||| | ||| || | Sbjct 60974 TTTCCGATGGCATCAATTTCATCAATGAAAATGATACATGGTGTACTCTTACGAGCATTG 60915 Query 11734 TCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTG-- 11791 |||| || || ||||| || || |||||||| || |||||||| || || | | Sbjct 60914 GCGAATAGGTCTCGTACGCGAGAGGCGCCAACACCGACAAACATCTCCACAAATTCAGAA 60855 Query 11792 CGGCAGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAG 11851 | || || ||||||| ||| || || |||||| ||||| |||| || || |||| Sbjct 60854 CCGCTGA-CACTGAA-GAATGGTACTCCAGACTCTCCAGCTGTGGCCTTCGCTAGAAGAG 60797 Query 11852 TCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCA 11907 ||||||| || || |||| |||| ||||| || || ||||| ||||| || ||| Sbjct 60796 TCTTACCGGTTCCTGGTGGGCCAGAGAGAATCGCTCCTCGGGGAATCTTTGCCCCA 60741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588970831735600