Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq667 152 1e-31 seq96 152 1e-31 seq623 111 3e-19 >seq667 Length=237617 Score = 152 bits (168), Expect = 1e-31 Identities = 164/217 (76%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 194925 TCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCC 194984 |||||| || | ||| |||||| ||| ||||||||||||||||| | | ||||| || Sbjct 143377 TCTCAACACCAAGTGGAGAGTGCTCTCCTTTTGAATATTGTAATCTGACAAAGTTCGGCC 143436 Query 194985 ATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTT 195044 |||||| | || |||||||||||||| || ||||| || ||||| ||||| ||||| || Sbjct 143437 ATCTTCCAATTGTTTACCTGCGAAGATCAGGCGTTGCTGATCTGGTGGAATTCCTTCCTT 143496 Query 195045 GTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAAC 195104 ||| || || || || ||||| ||||| ||||| || || ||||| || || | Sbjct 143497 GTCCTGGATCTTGGATTTCACGTTGTCAATTGTGTCTGATGACTCAACTTCCAGTGTGAT 143556 Query 195105 CGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || || || |||||||| || || || | ||||||| Sbjct 143557 TGTTTTGCCCGTCAAAGTCTTCACAAAGATTTGCATT 143593 Score = 145 bits (160), Expect = 2e-29 Identities = 143/185 (77%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| || ||||| ||||| || ||||| ||||||||| ||||| | ||||||||| Sbjct 144124 ACAAGATGGAGAGTAGACTCCTTCTGAATGTTGTAATCGCTCAGAGTGCGACCATCTTCG 144183 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 || || || || || ||||| || ||||||||||| ||||||||||| || ||||| ||| Sbjct 144184 AGTTGTTTGCCGGCAAAGATCAGACGTTGTTGGTCGGGAGGAATGCCCTCCTTGTCCTGA 144243 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||| || || || || || ||| ||| || ||||| || | |||||| Sbjct 144244 ATCTTGGACTTGACATTGTCGATAGTATCGGAAGATTCGACCTCAAGAGTGATGGTCTTT 144303 Query 195112 CCTGT 195116 || || Sbjct 144304 CCGGT 144308 Score = 125 bits (138), Expect = 2e-23 Identities = 147/199 (74%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||||||||| || || || || || || |||||||| | ||||| | ||||| || Sbjct 143840 ACAAGGTGAAGGGTAGATTCCTTCTGGATGTTGTAATCTGAGAGAGTACGGCCATCCTCC 143899 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 | ||||| || ||||| || || |||||||| || || || || || || ||||| || Sbjct 143900 AATTGCTTGCCAGCGAAAATGAGACGTTGTTGATCGGGTGGGATACCCTCCTTGTCCTGG 143959 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || ||| ||||||||| || ||||| || ||| || || |||||||| | ||||| Sbjct 143960 ATCTTTGACTTGACGTTGTCGATGGTATCTGAAGACTCGACCTCAAGGGTGATGGTCTTG 144019 Query 195112 CCTGTCAAAGTTTTTACGA 195130 || || | ||| || |||| Sbjct 144020 CCAGTAAGAGTCTTGACGA 144038 >seq96 Length=163266 Score = 152 bits (168), Expect = 1e-31 Identities = 159/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||||||||| ||||| || || || || |||||||||| | ||| | || |||||| Sbjct 52848 ACAAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAATCGGACAAAGTACGACCGTCTTCG 52789 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 || ||||| || |||||||| || ||||||||||| || || ||||| || || || || Sbjct 52788 AGTTGCTTGCCGGCGAAGATCAGACGTTGTTGGTCAGGTGGGATGCCCTCCTTATCCTGG 52729 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||| || || ||||| || || |||||| |||||||| | |||||| Sbjct 52728 ATCTTGGACTTGACATTGTCGATGGTATCGGACGATTCCACCTCAAGGGTGATCGTCTTA 52669 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | |||||| Sbjct 52668 CCCGTGAGGGTCTTGACGAAGATTTGCAT 52640 >seq623 Length=266034 Score = 111 bits (122), Expect = 3e-19 Identities = 132/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012 ||||| || ||||| ||| | ||| | ||||| || || ||||| || ||||| || Sbjct 249705 TTTTGGATGTTGTAGTCGCTCAAAGTGCGGCCATCCTCAAGTTGCTTGCCGGCGAAAATC 249646 Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072 || ||||||||||| || ||||| ||||| ||||||||||| || |||||| || || Sbjct 249645 AGACGTTGTTGGTCGGGTGGAATTCCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCG 249586 Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131 ||||| || || |||||| ||||| || | || || || || | || || ||||| Sbjct 249585 ATGGTATCGGATGATTCCACCTCAAGAGTGATGGTTTTACCCGTGAGGGTCTTGACGAA 249527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109471620906434