Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015-
05-13] 702 sequences; 27,513,354 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq681 125 6e-23
seq279 114 1e-19
seq667 87.8 1e-11
>seq681
Length=139357
Score = 125 bits (138), Expect = 6e-23
Identities = 459/711 (65%), Gaps = 11/711 (2%)
Strand=Plus/Plus
Query 551895 GCTCTTCGTCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACT 551954
||||| || ||||| |||| |||||||| | ||||| || | || || ||| |
Sbjct 110193 GCTCTCCGACGTCTCCGAACAGCTTGCGAGCGTGCCAAGCGTACCCTATCTTCTTCAGCA 110252
Query 551955 CAAACCACTATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCG 552014
||||| |||||||| | || || | || ||||| ||||||| |||| | || |
Sbjct 110253 CAAACATCTATTGAAATCGACTCTCTTTTCGAGGGTATTGATTTCTATACCTCAATCACC 110312
Query 552015 AGGGCCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAA 552074
| || ||||| || | || || ||||| | || || || ||||| ||
Sbjct 110313 CGTGCTCGCTTTGAGGAACTCTGCCAAGACCTCTTCCGCTCCACCATGGAGCCAGTTGAG 110372
Query 552075 CAAGTTTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGT 552134
| || | | ||| | || || || ||||| || ||||||||||| | |||||
Sbjct 110373 CGTGTCCTCCGTGATGCTAAAATCGACAAATCATCTGTCCATGAAATTGTCTTGGTTGGA 110432
Query 552135 GGATCTACAAGAATTCCTAAAATTCGCGAAA--TGTTAAGTTCTTATTTCAATGGTAAAA 552192
|| || || | || || || | ||| ||| ||| || ||| || ||
Sbjct 110433 GGTTCCACCCGTATCCCGCGTATCCA-GAAGCTTGTCTCCGACTTCTT-CAACGGCAAGG 110490
Query 552193 AATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAG 552252
| ||| | | | || || ||||||||||||||||| ||||| || | || || |
Sbjct 110491 AGCCAAACAAGTCTATCAACCCTGATGAGGCTGTTGCCTACGGTGCTGCTGTCCAGGCTG 110550
Query 552253 CTATTCTTTCTGGACAAAC-TGATGAAAAACTACAAA--ATATTGTACTTGTAGATGTTA 552309
| ||||| || || | || | | || | || || | ||| | ||| | |||||
Sbjct 110551 CCATTCTCTCAGGTGACACATCCTCCAAGTCCACCAACGAAATTCTTCTTCTCGATGTCG 110610
Query 552310 CTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAA 552369
| || | ||||| ||| | || || | ||| ||| ||||||| ||||||| | | |
Sbjct 110611 CCCCATTGTCTCTCGGTATCGAGACTGCTGGCGGTGTTATGACACCTCTTATCAAGCGCA 110670
Query 552370 ATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTG 552429
| ||||| || || || || || ||| || || || || || || ||| |||
Sbjct 110671 ACACTACAATCCCAACGAAGAAGTCAGAGACATTCTCCACATACTCTGACAACCAACCTG 110730
Query 552430 CTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTG 552489
||| |||||| ||| ||| || || | ||| || || || || | || |
Sbjct 110731 GTGTGCTCATTCAAGTTTATGAGGGTGAGCGTGCCCGCACCAAGGACAACAACCTGCTCG 110790
Query 552490 GTACTTTT--AATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGT 552547
| | ||| | ||| | ||||| || || |||||||| || || || |||||||| ||
Sbjct 110791 GAAAGTTTGAACTTTCG--GGTATCCCACCGGCTCCTCGCGGTGTTCCACAAATTGAGGT 110848
Query 552548 TACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAA 552598
||| |||||| | |||||||| || ||| |||| || ||||| ||| ||
Sbjct 110849 TACCTTCGATCTTGATGCCAACGGTATTATGAACGTTTCTGCTCTTGAGAA 110899
>seq279
Length=267861
Score = 114 bits (126), Expect = 1e-19
Identities = 105/133 (79%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 550400 GCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCT 550459
||||| || ||||| ||||| || || || ||| ||||||||||| || || || |||
Sbjct 219212 GCAGTCATTACTGTGCCAGCCTACTTCAACGACAACCAACGTCAAGCCACCAAGGACGCT 219153
Query 550460 GGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTT 550519
|| ||||||||||||||| ||||| ||||| ||||| || || ||||||||||| ||
Sbjct 219152 GGTGCTATTGCTGGACTTAACGTTCTCCGTATCATCAACGAGCCAACTGCTGCTGCTATT 219093
Query 550520 GCATATGGACTTG 550532
|| || || ||||
Sbjct 219092 GCCTACGGTCTTG 219080
>seq667
Length=237617
Score = 87.8 bits (96), Expect = 1e-11
Identities = 147/209 (70%), Gaps = 3/209 (1%)
Strand=Plus/Plus
Query 563267 CAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAA 563326
|||| || || || || || || |||||||||||| | | ||||| |||||| |
Sbjct 143386 CAAG-TGGAGAGTGCTCTCCTTTTGAATATTGTAATCTGACAAAGTTCGGCCATCTTCCA 143444
Query 563327 GTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAA 563386
|||||| || || || || || | ||||||||| || ||||||||||| || || || |
Sbjct 143445 ATTGTTTACCTGCGAAGATCAGGCGTTGCTGATCTGGTGGAATTCCTTCCTTGTCCTGGA 143504
Query 563387 TTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT-ACATTCGAGAGTAACAGTTTTA 563445
| || ||| || |||||||| || | ||| | | ||| || || | |||||
Sbjct 143505 TCTTGGATTTCACGTTGTCAATTGTGTCTG-ATGACTCAACTTCCAGTGTGATTGTTTTG 143563
Query 563446 CCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
|| || | ||| || || || ||||||||
Sbjct 143564 CCCGTCAAAGTCTTCACAAAGATTTGCAT 143592
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029258875073980
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |