Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq689 167 4e-36 >seq689 Length=208963 Score = 167 bits (184), Expect = 4e-36 Identities = 561/866 (65%), Gaps = 26/866 (3%) Strand=Plus/Minus Query 25470 CAAAGATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGAT 25529 |||| | || ||| | ||||||||||||||| || |||| |||||| ||||||||||| Sbjct 94773 CAAACAGATCTGGCAAATGTACAAGAAGGCTGAAGCCTCATTCTGGACTGCCGAAGAGAT 94714 Query 25530 TGATCTGGCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGC---ATTT 25586 |||||| | ||||| | ||| |||| || || ||| ||||| ||| | || Sbjct 94713 CGATCTGTCAAAGGATCTTCACGACTGGAACAATCGCCTCAATGACGATGAGCGCTACTT 94654 Query 25587 TCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTG 25646 || | || | || |||||||| || || |||||||| ||||| ||||| || Sbjct 94653 CATCTCCCATGTTCTTGCCTTCTTTGCCGCTTCAGATGGTATTGTGAATGAGAACTTGGT 94594 Query 25647 CGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706 ||| | ||| | | ||||| ||| | || || || |||||||| |||||||| Sbjct 94593 CGAACGTTTCTCTGGTGAAGTTCAGGTCCCAGAAGCACGATGCTTCTACGGCTTCCAGAT 94534 Query 25707 GGCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGAT---GACGTACATTA- 25762 || || || | ||||| ||| || | ||||| || || ||||||| Sbjct 94533 CATGATGGAGAACATCCACTCAGAGACATA---CTCTCTTCTCATCGACACATACATTAA 94477 Query 25763 -CAGACGTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAG 25821 || | || |||| | || |||| | |||||| || ||| || | ||| Sbjct 94476 GGAGCCAAAGCAGAGA-ACAT-ACTTGTTCGATGCCATTGATACCATCCCATGTATCCGC 94419 Query 25822 AGGAAGGCGCGGTGGGCCATGAAGTGGA-TCAACAGCCAGAGCGCTACGTTTGGC-GAGC 25879 | |||||| |||||||| | |||| |||| | | ||| || |||| || | | Sbjct 94418 AAGAAGGCCGATTGGGCCATTCACTGGATTCAAGACCAAGA-ATCT-TGTTTCGCTCAAC 94361 Query 25880 GGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCT 25939 | || || || |||||||| || ||||| ||||| ||| ||||| ||||| |||||| Sbjct 94360 GTCTCGTTGCTTTTGCTGCGGTTGAGGGTATCTTCTTCTCGGGTTCTTTTGCATCCATCT 94301 Query 25940 TCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTAC-TTTTCCAACGAGCTCATCAGC 25998 ||||| | ||| || || | ||||| || || ||| || || ||||| | ||| Sbjct 94300 TCTGGTTGAAGAAGCGCGGTATGATGCCGGGTCT-TACATTCTCTAACGAATTGATCTCT 94242 Query 25999 AGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCAC 26058 | || |||||||| |||| |||||||||||||| |||| | | ||| | | || Sbjct 94241 CGTGATGAGGGTCTGCACACTGATTTTGCCTGCCTCCTCTTCTC---TCACCTTAACAAC 94185 Query 26059 AAACCTTCTCAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAG 26118 || || | || | || | || |||| |||||||| || ||||| | || Sbjct 94184 CGCCCATCGAAGAAGGTCATCCAAGACATTATCACCGAGGCTGTTGAAATCGAACAAGAA 94125 Query 26119 TTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAA 26178 || | ||||||||| | ||||||| ||| Sbjct 94124 TTCTTGACTGATGCTCTTCCATGTGGTCTCCTCGGCATGAACGCTACTCTCATGAAGCAA 94065 Query 26179 TACATTGAGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGA--CTCTACA 26236 ||||| |||| ||| |||||| || || | || || | ||||| |||||| Sbjct 94064 TACATCGAGTTTGTTGCCGACAGACTCCTCATCGCTCTCGG--TAACCAGAAGTTCTACA 94007 Query 26237 GTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCT 26296 | | ||||| |||||||| ||||||||||| || | | || ||||| ||||||| Sbjct 94006 ACTCCACCAACCCATTCGACTTCATGGAAAACATCTCCCTTGCTGGAAAGACAAACTTCT 93947 Query 26297 TTGAAAAGAGGGTCGGCGACTATCAA 26322 |||| ||| | || || || || ||| Sbjct 93946 TTGAGAAGCGTGTTGGTGATTACCAA 93921 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928836649386880