Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015-
05-13] 702 sequences; 27,513,354 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq689 167 4e-36
>seq689
Length=208963
Score = 167 bits (184), Expect = 4e-36
Identities = 561/866 (65%), Gaps = 26/866 (3%)
Strand=Plus/Minus
Query 25470 CAAAGATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGAT 25529
|||| | || ||| | ||||||||||||||| || |||| |||||| |||||||||||
Sbjct 94773 CAAACAGATCTGGCAAATGTACAAGAAGGCTGAAGCCTCATTCTGGACTGCCGAAGAGAT 94714
Query 25530 TGATCTGGCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGC---ATTT 25586
|||||| | ||||| | ||| |||| || || ||| ||||| ||| | ||
Sbjct 94713 CGATCTGTCAAAGGATCTTCACGACTGGAACAATCGCCTCAATGACGATGAGCGCTACTT 94654
Query 25587 TCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTG 25646
|| | || | || |||||||| || || |||||||| ||||| ||||| ||
Sbjct 94653 CATCTCCCATGTTCTTGCCTTCTTTGCCGCTTCAGATGGTATTGTGAATGAGAACTTGGT 94594
Query 25647 CGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706
||| | ||| | | ||||| ||| | || || || |||||||| ||||||||
Sbjct 94593 CGAACGTTTCTCTGGTGAAGTTCAGGTCCCAGAAGCACGATGCTTCTACGGCTTCCAGAT 94534
Query 25707 GGCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGAT---GACGTACATTA- 25762
|| || || | ||||| ||| || | ||||| || || |||||||
Sbjct 94533 CATGATGGAGAACATCCACTCAGAGACATA---CTCTCTTCTCATCGACACATACATTAA 94477
Query 25763 -CAGACGTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAG 25821
|| | || |||| | || |||| | |||||| || ||| || | |||
Sbjct 94476 GGAGCCAAAGCAGAGA-ACAT-ACTTGTTCGATGCCATTGATACCATCCCATGTATCCGC 94419
Query 25822 AGGAAGGCGCGGTGGGCCATGAAGTGGA-TCAACAGCCAGAGCGCTACGTTTGGC-GAGC 25879
| |||||| |||||||| | |||| |||| | | ||| || |||| || | |
Sbjct 94418 AAGAAGGCCGATTGGGCCATTCACTGGATTCAAGACCAAGA-ATCT-TGTTTCGCTCAAC 94361
Query 25880 GGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCT 25939
| || || || |||||||| || ||||| ||||| ||| ||||| ||||| ||||||
Sbjct 94360 GTCTCGTTGCTTTTGCTGCGGTTGAGGGTATCTTCTTCTCGGGTTCTTTTGCATCCATCT 94301
Query 25940 TCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTAC-TTTTCCAACGAGCTCATCAGC 25998
||||| | ||| || || | ||||| || || ||| || || ||||| | |||
Sbjct 94300 TCTGGTTGAAGAAGCGCGGTATGATGCCGGGTCT-TACATTCTCTAACGAATTGATCTCT 94242
Query 25999 AGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCAC 26058
| || |||||||| |||| |||||||||||||| |||| | | ||| | | ||
Sbjct 94241 CGTGATGAGGGTCTGCACACTGATTTTGCCTGCCTCCTCTTCTC---TCACCTTAACAAC 94185
Query 26059 AAACCTTCTCAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAG 26118
|| || | || | || | || |||| |||||||| || ||||| | ||
Sbjct 94184 CGCCCATCGAAGAAGGTCATCCAAGACATTATCACCGAGGCTGTTGAAATCGAACAAGAA 94125
Query 26119 TTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAA 26178
|| | ||||||||| | ||||||| |||
Sbjct 94124 TTCTTGACTGATGCTCTTCCATGTGGTCTCCTCGGCATGAACGCTACTCTCATGAAGCAA 94065
Query 26179 TACATTGAGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGA--CTCTACA 26236
||||| |||| ||| |||||| || || | || || | ||||| ||||||
Sbjct 94064 TACATCGAGTTTGTTGCCGACAGACTCCTCATCGCTCTCGG--TAACCAGAAGTTCTACA 94007
Query 26237 GTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCT 26296
| | ||||| |||||||| ||||||||||| || | | || ||||| |||||||
Sbjct 94006 ACTCCACCAACCCATTCGACTTCATGGAAAACATCTCCCTTGCTGGAAAGACAAACTTCT 93947
Query 26297 TTGAAAAGAGGGTCGGCGACTATCAA 26322
|||| ||| | || || || || |||
Sbjct 93946 TTGAGAAGCGTGTTGGTGATTACCAA 93921
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928836649386880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |