Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq698 105 3e-18 >seq698 Length=89367 Score = 105 bits (116), Expect = 3e-18 Identities = 263/394 (67%), Gaps = 4/394 (1%) Strand=Plus/Plus Query 25892 GGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATC 25951 || ||||| ||| ||| || ||| | |||||| | |||||| | ||| |||||| Sbjct 2454 GGGCAGAACAAAGTCCACTCTTGATTCTTTTCAACTCGTTTCATAAAAAGATCAGGAATC 2513 Query 25952 CACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGA 26011 || | ||||| || | || | |||| | |||||| || ||||| ||||| || Sbjct 2514 CAAAGAGCATAGAAAAGGTCACGAGCTCGTACTTCTTCCTTGCCGTGGTTCTTGCGGAGG 2573 Query 26012 TCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTT 26071 || | ||| || |||| || ||||||||||| || | || || |||||| |||| | Sbjct 2574 TCAAGGAATTCGAAAACGTCCGAGTGCCATGGCTCAAGGTAAATGGCAAAAGCACCTGGT 2633 Query 26072 CTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGA 26131 | ||| ||||| || || |||||||| ||||| | ||||| || | ||| ||| Sbjct 2634 CGTTTGTTGCCACCCTGGTCAACGTATCTAGCAGTGTTGTTGAACACGCGGAGCATGGGA 2693 Query 26132 ACTAATCCAGTT-GAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATC 26190 || ||| | ||| ||| | || || || | ||| | || || || | || ||| Sbjct 2694 AC-AATACCGTTGGAAGAACCATTAGTCCCGCCAATGTAAGAGCCAGTGGCTCGAATTCT 2752 Query 26191 GTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAA-TCTGAAACTG 26249 |||| | | |||||| ||||| || || || || |||||| ||| || | Sbjct 2753 GTGAATGTTGAGACCGATACCACCGGCGGTCTTGGAGATCATGGCACAAGTCTTCAA-AG 2811 Query 26250 TATCGAAAATTCCTTTTATGCTATCACCTTTCAT 26283 |||| | ||||||| || || || ||||||| Sbjct 2812 TATCATAGATTCCTTCGATACTGTCCTCTTTCAT 2845 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253037835084650