Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq290 150 2e-31 >seq290 Length=142584 Score = 150 bits (166), Expect = 2e-31 Identities = 200/278 (72%), Gaps = 0/278 (0%) Strand=Plus/Plus Query 139263 CCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCT 139322 || || | |||||| || |||||||| || ||||||||| |||| ||||||||| Sbjct 114269 CCCTCCGGACCATGGTAAATGGCATAGAAGGCACTCATATTTGCTAGCAAGGCTTGTGCT 114328 Query 139323 GTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCT 139382 || ||||||||||| || || || || | || || ||||||||||| ||||| || || Sbjct 114329 GTACAGATGTTACTTGTGGCCTTCTCACGCCTGATGTGCTGCTCTCTGGTTTGAAGGGCC 114388 Query 139383 AATCTGTATGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGTATC 139442 | | | || ||| |||| | ||| || ||| | | | |||||| ||| Sbjct 114389 AGACGCAAAGCCCGATGGCCTAACCGATCCTTGGATACACCGATCAGACGGCCAGGAATC 114448 Query 139443 TTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCCATA 139502 || ||||| |||||||| | || ||||| || |||||||| || || |||||||||| Sbjct 114449 TTCCTCTTGTACTTGTCACTGGTGGCAAAAAAGGCAGCATGCGGTCCACCGTATCCCAGC 114508 Query 139503 GGAATACCAAACCTTTGCATACTACCTACAGCAATATC 139540 || | ||| || |||||| | |||| | ||||||||| Sbjct 114509 GGCACACCGAATCTTTGCGCATTACCAAAAGCAATATC 114546 Score = 84.2 bits (92), Expect = 3e-11 Identities = 130/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 139859 CATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCC 139918 ||| ||||| ||||| || ||||| |||||||||| |||||||||||| || || | | | Sbjct 114892 CATGGCCTCCGCTGCAGCCGTTGCCTCATCTAATACAGATGCGTTTGCAATCGGAAGTGC 114951 Query 139919 TGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATAT 139978 || || || | ||| || ||| | || | ||||| || | || ||||| || Sbjct 114952 GGTCAGGTCACATACGAGTGTCTGGAAGTTCAGTAAAGACTCTAGTCGGCCCTGGCTAAT 115011 Query 139979 CTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTCAAGAACGTTTCGCTG 140038 || || || || || ||||| ||||||||| || |||| | || |||| ||| Sbjct 115012 TTCGGCCTGGTAAGGCGTGTAGCTGGTGTACCAAGCGGGGCTCTCCAAGACATTTCTCTG 115071 Query 140039 TATGAC 140044 ||||| Sbjct 115072 AATGAC 115077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578993319289040