Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq689 141 1e-28 >seq689 Length=208963 Score = 141 bits (156), Expect = 1e-28 Identities = 368/554 (66%), Gaps = 11/554 (2%) Strand=Plus/Plus Query 18158 CACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACGTTAAC 18217 || |||||||||||||| | ||| ||||| | || || ||||||||| || || | Sbjct 94210 CAGGCAAAATCAGTGTGCAGACCCTCATCACGAGAGATCAATTCGTTAGAGAATGTAAGA 94269 Query 18218 CCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAAAAGAAT 18277 || ||||| ||||| | || || | ||| || || ||||| ||| || || ||||| Sbjct 94270 CCCGGCATCATACCGCGCTTCTTCAACCAGAAGATGGATGCAAAAGAACCCGAGAAGAAG 94329 Query 18278 ATACCCTCAA-CGCACGCGAACGCTATTAATCTTTCAGCAAAACTGTATTTATTGCTC-A 18335 |||||||||| |||| || || || | | | || ||| |||| | || ||| || Sbjct 94330 ATACCCTCAACCGCA-GCAAAAGCAACGAGACGTTGAGCGAAACAAGA-TTCTTGGTCTT 94387 Query 18336 GTATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTATAGCAT 18395 | ||||| | ||||| || | | ||||| || || | || || |||| Sbjct 94388 GAATCCAGTGAATGGCCCAATCGGCCTTCTTGCGGATACATGGGATGGTATCAATGGCAT 94447 Query 18396 TAAACAA--ATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAATA 18453 ||||| || || | | |||||| || || || || |||||||| | | ||| || Sbjct 94448 CGAACAAGTATGTTC-TCTGCTTTGG-CTCCTTAATGTATGTGTCGATGAGAAGAGAGTA 94505 Query 18454 CATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCGGG 18513 | || || || ||| | ||||| ||||| || | || || ||| || || || Sbjct 94506 TGTCTCTGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGTGCTTCTGG 94565 Query 18514 ATATTGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCAGA 18573 |||| || | | | || | ||| ||||| |||||||| || ||||| || | || Sbjct 94566 GACCTGAACTTCACCAGAGAAACGTTCGACCAAGTTCTCATTCACAATACCATCTGAAGC 94625 Query 18574 TGCGAAAAATGCCAAAACATATTTAATGAAATGTTTTTCATTATCCTTGA---GATTGTT 18630 || || || || | ||||| ||||| | |||| || |||| ||||||| Sbjct 94626 GGCAAAGAAGGCAAGAACATGGGAGATGAAGTAGCGCTCATCGTCATTGAGGCGATTGTT 94685 Query 18631 CCATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGATTCGGC 18690 ||| || | | ||| ||||| ||||| | ||||| | ||||| || || | ||| || Sbjct 94686 CCAGTCGTGAAGATCCTTTGACAGATCGATCTCTTCGGCAGTCCAGAATGAGGCTTCAGC 94745 Query 18691 CTGTTTGTACATTT 18704 || |||||||||| Sbjct 94746 CTTCTTGTACATTT 94759 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731865577823200