Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015-
05-13] 702 sequences; 27,513,354 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq689 141 1e-28
>seq689
Length=208963
Score = 141 bits (156), Expect = 1e-28
Identities = 368/554 (66%), Gaps = 11/554 (2%)
Strand=Plus/Plus
Query 18158 CACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACGTTAAC 18217
|| |||||||||||||| | ||| ||||| | || || ||||||||| || || |
Sbjct 94210 CAGGCAAAATCAGTGTGCAGACCCTCATCACGAGAGATCAATTCGTTAGAGAATGTAAGA 94269
Query 18218 CCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAAAAGAAT 18277
|| ||||| ||||| | || || | ||| || || ||||| ||| || || |||||
Sbjct 94270 CCCGGCATCATACCGCGCTTCTTCAACCAGAAGATGGATGCAAAAGAACCCGAGAAGAAG 94329
Query 18278 ATACCCTCAA-CGCACGCGAACGCTATTAATCTTTCAGCAAAACTGTATTTATTGCTC-A 18335
|||||||||| |||| || || || | | | || ||| |||| | || ||| ||
Sbjct 94330 ATACCCTCAACCGCA-GCAAAAGCAACGAGACGTTGAGCGAAACAAGA-TTCTTGGTCTT 94387
Query 18336 GTATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTATAGCAT 18395
| ||||| | ||||| || | | ||||| || || | || || ||||
Sbjct 94388 GAATCCAGTGAATGGCCCAATCGGCCTTCTTGCGGATACATGGGATGGTATCAATGGCAT 94447
Query 18396 TAAACAA--ATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAATA 18453
||||| || || | | |||||| || || || || |||||||| | | ||| ||
Sbjct 94448 CGAACAAGTATGTTC-TCTGCTTTGG-CTCCTTAATGTATGTGTCGATGAGAAGAGAGTA 94505
Query 18454 CATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCGGG 18513
| || || || ||| | ||||| ||||| || | || || ||| || || ||
Sbjct 94506 TGTCTCTGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGTGCTTCTGG 94565
Query 18514 ATATTGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCAGA 18573
|||| || | | | || | ||| ||||| |||||||| || ||||| || | ||
Sbjct 94566 GACCTGAACTTCACCAGAGAAACGTTCGACCAAGTTCTCATTCACAATACCATCTGAAGC 94625
Query 18574 TGCGAAAAATGCCAAAACATATTTAATGAAATGTTTTTCATTATCCTTGA---GATTGTT 18630
|| || || || | ||||| ||||| | |||| || |||| |||||||
Sbjct 94626 GGCAAAGAAGGCAAGAACATGGGAGATGAAGTAGCGCTCATCGTCATTGAGGCGATTGTT 94685
Query 18631 CCATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGATTCGGC 18690
||| || | | ||| ||||| ||||| | ||||| | ||||| || || | ||| ||
Sbjct 94686 CCAGTCGTGAAGATCCTTTGACAGATCGATCTCTTCGGCAGTCCAGAATGAGGCTTCAGC 94745
Query 18691 CTGTTTGTACATTT 18704
|| ||||||||||
Sbjct 94746 CTTCTTGTACATTT 94759
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731865577823200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |