Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq667 107 4e-18 >seq667 Length=237617 Score = 107 bits (118), Expect = 4e-18 Identities = 139/191 (73%), Gaps = 1/191 (1%) Strand=Plus/Plus Query 192347 CTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGA 192406 |||| || ||||| ||||| || || ||||| |||| |||||||||||||| || |||| Sbjct 143404 CTTTTGA-ATATTGTAATCTGACAAAGTTCGGCCATCTTCCAATTGTTTACCTGCGAAGA 143462 Query 192407 TTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAG 192466 | | | || ||||| ||||| |||||||| || || || || || ||| || || Sbjct 143463 TCAGGCGTTGCTGATCTGGTGGAATTCCTTCCTTGTCCTGGATCTTGGATTTCACGTTGT 143522 Query 192467 TTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAA 192526 || | ||||| || || ||||| || || || ||||| || || || || || | || Sbjct 143523 CAATTGTGTCTGATGACTCAACTTCCAGTGTGATTGTTTTGCCCGTCAAAGTCTTCACAA 143582 Query 192527 ATATCTGCATT 192537 | || |||||| Sbjct 143583 AGATTTGCATT 143593 Score = 95.1 bits (104), Expect = 2e-14 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 192355 ATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTC 192414 || || ||||| || || ||||| |||| |||| ||| || ||||||||||| | | Sbjct 143639 ATGTTGTAATCTGACAAAGTTCGGCCATCTTCCAGTTGCTTTCCAGCAAAGATCAGGCGT 143698 Query 192415 TGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAA 192474 || ||||| ||||| || || || |||||||| || || ||| || ||| || | Sbjct 143699 TGCTGATCTGGTGGAATCCCCTCCTTATCTTGGATCTTGGATTTCACGTTATCAATCGTG 143758 Query 192475 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGC 192534 ||||| || || ||||| | || || || || || || || || || | ||| |||||| Sbjct 143759 TCTGATGACTCGACTTCCAATGTGATCGTCTTTCCGGTCAACGTCTTCACAAAGATCTGC 143818 Query 192535 AT 192536 || Sbjct 143819 AT 143820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984471145217700