Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015-
05-13] 702 sequences; 27,513,354 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq5 123 7e-23
seq689 122 3e-22
seq698 116 1e-20
seq39 104 7e-17
seq14 89.7 2e-12
>seq5
Length=68142
Score = 123 bits (136), Expect = 7e-23
Identities = 233/336 (69%), Gaps = 14/336 (4%)
Strand=Plus/Minus
Query 289036 GCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCAAATAAT 289095
||||||||||| ||||||||||| | ||| || | | | | | ||| | || ||||
Sbjct 60965 GCATCAATTTCATCAATGAAAATGATACATGGTGTACTCTTACGAGCATTGGCGAATAGG 60906
Query 289096 TCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAA--GCGGATA 289153
|||| ||| || || || |||| ||| ||| |||| || |||||||||||| || || |
Sbjct 60905 TCTCGTACGCGAGAGGCGCCAACACCGACAAACATCTCCACAAATTCAGAACCGCTGACA 60846
Query 289154 CTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTG 289213
| |||| ||||| ||| | || || ||| ||| |||| ||||| |||||||| |
Sbjct 60845 C-TGAA-GAATGGTACTCCAGACTCTCCAGCTGTGGCCTTCGCTAGAAGAGTCTTACCGG 60788
Query 289214 TTCCAGGTGGTCCCTCTAATAGAA---CTCCCTTTGGTACTTTTGCCCCAGCAGACTT-- 289268
|||| ||||| | | | |||| |||| || | ||||||||| || ||
Sbjct 60787 TTCCTGGTGGGC---CAGAGAGAATCGCTCCTCGGGGAATCTTTGCCCCA--AGCTTTTG 60733
Query 289269 ATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCATC 289328
| | ||||| ||| |||| ||||| || |||| |||| | || ||| ||||| ||
Sbjct 60732 AAACTTCTCGGGGTTCTTCAAAAACTCAACAAATTCCATGATCTCGACTTTAGCCTCGTC 60673
Query 289329 ACATCCTGCTACATCAGCAAAAGTAATATTAATATC 289364
||| || ||||||| || | || || |||||
Sbjct 60672 CATTCCGGCGACATCAGAGAACTTGATCTTGATATC 60637
>seq689
Length=208963
Score = 122 bits (134), Expect = 3e-22
Identities = 457/703 (65%), Gaps = 14/703 (2%)
Strand=Plus/Minus
Query 133232 GCGTTTTTTGCTGCGAGTGATGGTATTGTTCTTGAAAATTTAG--GAACACGGTTTATG- 133288
|| || ||||| || ||||||||||| ||| || || | |||| |||| |
Sbjct 94637 GCCTTCTTTGCCGCTTCAGATGGTATTGTGAATGAGAACTTGGTCGAAC---GTTTCTCT 94581
Query 133289 GGAGAAGTTCAACTGGCCGAAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAAT 133348
|| |||||||| | | ||||| || ||| || || | ||||| |||||| ||
Sbjct 94580 GGTGAAGTTCAGGTCCCAGAAGCACGATGCTTCTACGGCTTCCAGATCATGATGGAGAAC 94521
Query 133349 ATCCATTCTATCACATATTCTACTCTAATTGATACTTACATCAAAGATACCGTCCAGAAG 133408
||||| || ||||| ||| ||| || || || ||||| || || | |||| |
Sbjct 94520 ATCCACTCAGAGACATACTCTCTTCTCATCGACACATACATTAAGGAGCCAAAGCAGA-G 94462
Query 133409 CACAAACTA-TTCAACGCCATTAGCGAATTTCCTTGTATTAAAAAGAAATCTGACTGGGC 133467
||| ||| ||| | |||||| | || ||||| ||||| | || |||||
Sbjct 94461 AACATACTTGTTCGATGCCATTGATACCATCCCATGTATCCGCAAGAAGGCCGATTGGGC 94402
Query 133468 TATTAAATGGATCCAGGAC-AAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTG 133526
||| | ||||| || ||| ||| | | |||| ||| |||||||||||||||||||
Sbjct 94401 CATTCACTGGATTCAAGACCAAGAAT-CTTGTTTCGCTCAACGTCTCGTTGCTTTTGCTG 94343
Query 133527 TAGTAGAGGGCAtttttttCAGTGGTGCGTTCTGC-TCTATTTTTTGGCTTAAAAAGCGT 133585
|| ||||| || || ||| ||| | || ||| || || || ||| | || |||||
Sbjct 94342 CGGTTGAGGGTATCTTCTTCTCGGGTTC-TTTTGCATCCATCTTCTGGTTGAAGAAGCGC 94284
Query 133586 GGTATTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCAAGGGACGAGGCACTTCAC 133645
||||| | || || || || ||||||||| | || || | || |||| || |||
Sbjct 94283 GGTATGATGCCGGGTCTTACATTCTCTAACGAATTGATCTCTCGTGATGAGGGTCTGCAC 94224
Query 133646 ACCGAATTTGCCGTTTTACTTCACTCTAAATTAGAGCGACCACTCA-AAAAGAATAAGAT 133704
|| || |||||| | || |||| | | | | ||| | || ||||| ||
Sbjct 94223 ACTGATTTTGCCTGCCTCCTCTTCTCTCACCT-TAACAACCGCCCATCGAAGAAGGTCAT 94165
Query 133705 TGAAGAAATTATTAGAGAAGCGGTTGAAATTGAGGTTGAATTTATCAATAGTGCTCTGCC 133764
|||| ||||| | || || |||||||| || ||||| | | | |||||| ||
Sbjct 94164 CCAAGACATTATCACCGAGGCTGTTGAAATCGAACAAGAATTCTTGACTGATGCTCTTCC 94105
Query 133765 GTGCCGTTTAATTGGTATGAATGATGTGCTGATGCAGCGTTATATTGAATTTGTAGCTGA 133824
|| || | | || ||||| | | || ||| ||| || || || ||||| || ||
Sbjct 94104 ATGTGGTCTCCTCGGCATGAACGCTACTCTCATGAAGCAATACATCGAGTTTGTTGCCGA 94045
Query 133825 CAGATTGGCCGTTCAGTTAGGTGGGGATAAGATTTACGGTTCCGCCAATCCATTCGACTG 133884
|||| | | | | ||| | ||| | ||| ||| |||| ||||||||||
Sbjct 94044 CAGACTCCTCATCGCTCTCGGTAACCAGAAGTTCTACAACTCCACCAACCCATTCGACTT 93985
Query 133885 GATGGAGAGCATTAGCATTGAATCAAAGACTAATTTCTTCGAG 133927
||||| | ||| | ||| |||||| || ||||| |||
Sbjct 93984 CATGGAAAACATCTCCCTTGCTGGAAAGACAAACTTCTTTGAG 93942
>seq698
Length=89367
Score = 116 bits (128), Expect = 1e-20
Identities = 200/290 (69%), Gaps = 3/290 (1%)
Strand=Plus/Plus
Query 155910 ACACGCTCCATAAATACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGAC 155969
|| || | |||||| | |||| ||||| ||||||||||||||| | || |
Sbjct 2487 ACTCGTTTCATAAAAAGATCAGGAATCCAAAGAGCATAGAAAAGGTCACGAGCTCGTACT 2546
Query 155970 TCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGC 156029
|| || | |||||| ||||| || || || | |||||| || || | || ||||
Sbjct 2547 TCTTCCTTGCCGTGGTTCTTGCGGAGGTCAAGGAATTCGAAAACGTCCGAGTGCCATGGC 2606
Query 156030 TCCAGATACATAGCAAAACTACCATTCC---TCTTGCCACCCTGATCTACATACCGAGCA 156086
|| || || || |||||| ||| | | ||||||||||| || || || | ||||
Sbjct 2607 TCAAGGTAAATGGCAAAAGCACCTGGTCGTTTGTTGCCACCCTGGTCAACGTATCTAGCA 2666
Query 156087 GTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGA 156146
|| || ||||| || | ||||| |||| |||||| ||||||| ||||| || |||| |
Sbjct 2667 GTGTTGTTGAACACGCGGAGCATGGGAACAATACCGTTGGAAGAACCATTAGTCCCGCCA 2726
Query 156147 ATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACC 156196
|| | || |||| | |||| | ||||| | || || ||||||||
Sbjct 2727 ATGTAAGAGCCAGTGGCTCGAATTCTGTGAATGTTGAGACCGATACCACC 2776
>seq39
Length=504158
Score = 104 bits (114), Expect = 7e-17
Identities = 126/169 (75%), Gaps = 2/169 (1%)
Strand=Plus/Minus
Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGA 251466
|| || ||||| ||| ||| |||||||| | | | | ||||| | || | || |
Sbjct 328253 ATCAGTCCACAAATATCACAGACATGGACTCGGAACGGGTCAGAAACATCGAAAAGTCTC 328194
Query 251467 CCCTTGGTGAAGCGAGAT-GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAA 251525
| ||| ||| ||| | || ||||||| |||||||||||| ||||||||||| |||||
Sbjct 328193 TCTTTGAGGAAT-GAGCTCGCGCCGTGTGCAATCATACAATCGCGCTCCATTTCTCCGAA 328135
Query 251526 ACGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGA 251574
|||||||||||||| || || | ||||||| | ||||| || || |||
Sbjct 328134 TCGAAGACCACCATCTCGTGCACGACCCTCGACTGGCTGTCGGGTAAGA 328086
>seq14
Length=111499
Score = 89.7 bits (98), Expect = 2e-12
Identities = 104/140 (74%), Gaps = 3/140 (2%)
Strand=Plus/Plus
Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872
|||||||| | | ||| |||||||| || ||||| ||||| | ||||||||||
Sbjct 19864 AGAATTTCCTTGAGACGAGGAACACCCAATGTAACGTT---CTTGGCAGAAACACCAGCA 19920
Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932
|||||||| || ||||| || | ||| || | |||||||| || ||| || ||||
Sbjct 19921 AAGTGGAATGTGTTCAGCGTCATTTGCGTGGCAGGCTCACCGATGGATTGAGCAGCAAGT 19980
Query 301933 ATACCAACCATTTCTCCTGG 301952
| ||| ||||| ||||||||
Sbjct 19981 ACACCGACCATCTCTCCTGG 20000
Score = 87.8 bits (96), Expect = 5e-12
Identities = 147/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 302592 ACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACG 302651
|||||||||||| ||||| || || ||||||||||| || ||||||||||| ||||
Sbjct 20664 ACGACGCTGAATGTAACCTGTCTCAGCAGTTTTTACAGCAGTGTCAATTAGACCTTCACG 20723
Query 302652 ACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTC 302711
||| |||| || ||||| || | ||| || |||||| | | | || | ||
Sbjct 20724 ACCGGCCATGGCGTGGAAAAAGAACTCCGAGGGAGTTAGCCCTCGCAAGTATGAATTTTC 20783
Query 302712 AACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTT 302771
||| ||||| | || | || | |||| |||| || ||||| || || | ||
Sbjct 20784 AACAAAACCCTTGGACTGAGCTGAGTAGTCGTCTTTGGCGAAATGTGGTAGTGTTCGGTA 20843
Query 302772 CTCATAGCCGTATGGGATACGCTTTCCATCAAC 302804
| | | ||| | || ||||||||||| |||||
Sbjct 20844 TTTAAACCCGAAGGGAATACGCTTTCCTTCAAC 20876
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471804361920574
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |