Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq5 123 7e-23 seq689 122 3e-22 seq698 116 1e-20 seq39 104 7e-17 seq14 89.7 2e-12 >seq5 Length=68142 Score = 123 bits (136), Expect = 7e-23 Identities = 233/336 (69%), Gaps = 14/336 (4%) Strand=Plus/Minus Query 289036 GCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCAAATAAT 289095 ||||||||||| ||||||||||| | ||| || | | | | | ||| | || |||| Sbjct 60965 GCATCAATTTCATCAATGAAAATGATACATGGTGTACTCTTACGAGCATTGGCGAATAGG 60906 Query 289096 TCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAA--GCGGATA 289153 |||| ||| || || || |||| ||| ||| |||| || |||||||||||| || || | Sbjct 60905 TCTCGTACGCGAGAGGCGCCAACACCGACAAACATCTCCACAAATTCAGAACCGCTGACA 60846 Query 289154 CTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTG 289213 | |||| ||||| ||| | || || ||| ||| |||| ||||| |||||||| | Sbjct 60845 C-TGAA-GAATGGTACTCCAGACTCTCCAGCTGTGGCCTTCGCTAGAAGAGTCTTACCGG 60788 Query 289214 TTCCAGGTGGTCCCTCTAATAGAA---CTCCCTTTGGTACTTTTGCCCCAGCAGACTT-- 289268 |||| ||||| | | | |||| |||| || | ||||||||| || || Sbjct 60787 TTCCTGGTGGGC---CAGAGAGAATCGCTCCTCGGGGAATCTTTGCCCCA--AGCTTTTG 60733 Query 289269 ATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCATC 289328 | | ||||| ||| |||| ||||| || |||| |||| | || ||| ||||| || Sbjct 60732 AAACTTCTCGGGGTTCTTCAAAAACTCAACAAATTCCATGATCTCGACTTTAGCCTCGTC 60673 Query 289329 ACATCCTGCTACATCAGCAAAAGTAATATTAATATC 289364 ||| || ||||||| || | || || ||||| Sbjct 60672 CATTCCGGCGACATCAGAGAACTTGATCTTGATATC 60637 >seq689 Length=208963 Score = 122 bits (134), Expect = 3e-22 Identities = 457/703 (65%), Gaps = 14/703 (2%) Strand=Plus/Minus Query 133232 GCGTTTTTTGCTGCGAGTGATGGTATTGTTCTTGAAAATTTAG--GAACACGGTTTATG- 133288 || || ||||| || ||||||||||| ||| || || | |||| |||| | Sbjct 94637 GCCTTCTTTGCCGCTTCAGATGGTATTGTGAATGAGAACTTGGTCGAAC---GTTTCTCT 94581 Query 133289 GGAGAAGTTCAACTGGCCGAAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAAT 133348 || |||||||| | | ||||| || ||| || || | ||||| |||||| || Sbjct 94580 GGTGAAGTTCAGGTCCCAGAAGCACGATGCTTCTACGGCTTCCAGATCATGATGGAGAAC 94521 Query 133349 ATCCATTCTATCACATATTCTACTCTAATTGATACTTACATCAAAGATACCGTCCAGAAG 133408 ||||| || ||||| ||| ||| || || || ||||| || || | |||| | Sbjct 94520 ATCCACTCAGAGACATACTCTCTTCTCATCGACACATACATTAAGGAGCCAAAGCAGA-G 94462 Query 133409 CACAAACTA-TTCAACGCCATTAGCGAATTTCCTTGTATTAAAAAGAAATCTGACTGGGC 133467 ||| ||| ||| | |||||| | || ||||| ||||| | || ||||| Sbjct 94461 AACATACTTGTTCGATGCCATTGATACCATCCCATGTATCCGCAAGAAGGCCGATTGGGC 94402 Query 133468 TATTAAATGGATCCAGGAC-AAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTG 133526 ||| | ||||| || ||| ||| | | |||| ||| ||||||||||||||||||| Sbjct 94401 CATTCACTGGATTCAAGACCAAGAAT-CTTGTTTCGCTCAACGTCTCGTTGCTTTTGCTG 94343 Query 133527 TAGTAGAGGGCAtttttttCAGTGGTGCGTTCTGC-TCTATTTTTTGGCTTAAAAAGCGT 133585 || ||||| || || ||| ||| | || ||| || || || ||| | || ||||| Sbjct 94342 CGGTTGAGGGTATCTTCTTCTCGGGTTC-TTTTGCATCCATCTTCTGGTTGAAGAAGCGC 94284 Query 133586 GGTATTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCAAGGGACGAGGCACTTCAC 133645 ||||| | || || || || ||||||||| | || || | || |||| || ||| Sbjct 94283 GGTATGATGCCGGGTCTTACATTCTCTAACGAATTGATCTCTCGTGATGAGGGTCTGCAC 94224 Query 133646 ACCGAATTTGCCGTTTTACTTCACTCTAAATTAGAGCGACCACTCA-AAAAGAATAAGAT 133704 || || |||||| | || |||| | | | | ||| | || ||||| || Sbjct 94223 ACTGATTTTGCCTGCCTCCTCTTCTCTCACCT-TAACAACCGCCCATCGAAGAAGGTCAT 94165 Query 133705 TGAAGAAATTATTAGAGAAGCGGTTGAAATTGAGGTTGAATTTATCAATAGTGCTCTGCC 133764 |||| ||||| | || || |||||||| || ||||| | | | |||||| || Sbjct 94164 CCAAGACATTATCACCGAGGCTGTTGAAATCGAACAAGAATTCTTGACTGATGCTCTTCC 94105 Query 133765 GTGCCGTTTAATTGGTATGAATGATGTGCTGATGCAGCGTTATATTGAATTTGTAGCTGA 133824 || || | | || ||||| | | || ||| ||| || || || ||||| || || Sbjct 94104 ATGTGGTCTCCTCGGCATGAACGCTACTCTCATGAAGCAATACATCGAGTTTGTTGCCGA 94045 Query 133825 CAGATTGGCCGTTCAGTTAGGTGGGGATAAGATTTACGGTTCCGCCAATCCATTCGACTG 133884 |||| | | | | ||| | ||| | ||| ||| |||| |||||||||| Sbjct 94044 CAGACTCCTCATCGCTCTCGGTAACCAGAAGTTCTACAACTCCACCAACCCATTCGACTT 93985 Query 133885 GATGGAGAGCATTAGCATTGAATCAAAGACTAATTTCTTCGAG 133927 ||||| | ||| | ||| |||||| || ||||| ||| Sbjct 93984 CATGGAAAACATCTCCCTTGCTGGAAAGACAAACTTCTTTGAG 93942 >seq698 Length=89367 Score = 116 bits (128), Expect = 1e-20 Identities = 200/290 (69%), Gaps = 3/290 (1%) Strand=Plus/Plus Query 155910 ACACGCTCCATAAATACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGAC 155969 || || | |||||| | |||| ||||| ||||||||||||||| | || | Sbjct 2487 ACTCGTTTCATAAAAAGATCAGGAATCCAAAGAGCATAGAAAAGGTCACGAGCTCGTACT 2546 Query 155970 TCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGC 156029 || || | |||||| ||||| || || || | |||||| || || | || |||| Sbjct 2547 TCTTCCTTGCCGTGGTTCTTGCGGAGGTCAAGGAATTCGAAAACGTCCGAGTGCCATGGC 2606 Query 156030 TCCAGATACATAGCAAAACTACCATTCC---TCTTGCCACCCTGATCTACATACCGAGCA 156086 || || || || |||||| ||| | | ||||||||||| || || || | |||| Sbjct 2607 TCAAGGTAAATGGCAAAAGCACCTGGTCGTTTGTTGCCACCCTGGTCAACGTATCTAGCA 2666 Query 156087 GTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGA 156146 || || ||||| || | ||||| |||| |||||| ||||||| ||||| || |||| | Sbjct 2667 GTGTTGTTGAACACGCGGAGCATGGGAACAATACCGTTGGAAGAACCATTAGTCCCGCCA 2726 Query 156147 ATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACC 156196 || | || |||| | |||| | ||||| | || || |||||||| Sbjct 2727 ATGTAAGAGCCAGTGGCTCGAATTCTGTGAATGTTGAGACCGATACCACC 2776 >seq39 Length=504158 Score = 104 bits (114), Expect = 7e-17 Identities = 126/169 (75%), Gaps = 2/169 (1%) Strand=Plus/Minus Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGA 251466 || || ||||| ||| ||| |||||||| | | | | ||||| | || | || | Sbjct 328253 ATCAGTCCACAAATATCACAGACATGGACTCGGAACGGGTCAGAAACATCGAAAAGTCTC 328194 Query 251467 CCCTTGGTGAAGCGAGAT-GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAA 251525 | ||| ||| ||| | || ||||||| |||||||||||| ||||||||||| ||||| Sbjct 328193 TCTTTGAGGAAT-GAGCTCGCGCCGTGTGCAATCATACAATCGCGCTCCATTTCTCCGAA 328135 Query 251526 ACGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGA 251574 |||||||||||||| || || | ||||||| | ||||| || || ||| Sbjct 328134 TCGAAGACCACCATCTCGTGCACGACCCTCGACTGGCTGTCGGGTAAGA 328086 >seq14 Length=111499 Score = 89.7 bits (98), Expect = 2e-12 Identities = 104/140 (74%), Gaps = 3/140 (2%) Strand=Plus/Plus Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872 |||||||| | | ||| |||||||| || ||||| ||||| | |||||||||| Sbjct 19864 AGAATTTCCTTGAGACGAGGAACACCCAATGTAACGTT---CTTGGCAGAAACACCAGCA 19920 Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932 |||||||| || ||||| || | ||| || | |||||||| || ||| || |||| Sbjct 19921 AAGTGGAATGTGTTCAGCGTCATTTGCGTGGCAGGCTCACCGATGGATTGAGCAGCAAGT 19980 Query 301933 ATACCAACCATTTCTCCTGG 301952 | ||| ||||| |||||||| Sbjct 19981 ACACCGACCATCTCTCCTGG 20000 Score = 87.8 bits (96), Expect = 5e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 302592 ACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACG 302651 |||||||||||| ||||| || || ||||||||||| || ||||||||||| |||| Sbjct 20664 ACGACGCTGAATGTAACCTGTCTCAGCAGTTTTTACAGCAGTGTCAATTAGACCTTCACG 20723 Query 302652 ACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTC 302711 ||| |||| || ||||| || | ||| || |||||| | | | || | || Sbjct 20724 ACCGGCCATGGCGTGGAAAAAGAACTCCGAGGGAGTTAGCCCTCGCAAGTATGAATTTTC 20783 Query 302712 AACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTT 302771 ||| ||||| | || | || | |||| |||| || ||||| || || | || Sbjct 20784 AACAAAACCCTTGGACTGAGCTGAGTAGTCGTCTTTGGCGAAATGTGGTAGTGTTCGGTA 20843 Query 302772 CTCATAGCCGTATGGGATACGCTTTCCATCAAC 302804 | | | ||| | || ||||||||||| ||||| Sbjct 20844 TTTAAACCCGAAGGGAATACGCTTTCCTTCAAC 20876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471804361920574