Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015-
05-13] 702 sequences; 27,513,354 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq12 122 1e-21
seq109 91.5 2e-12
>seq12
Length=263918
Score = 122 bits (134), Expect = 1e-21
Identities = 102/125 (82%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 1592168 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGG 1592227
|||||||| | |||||||| || ||||||||||| |||||| |||| | ||| ||||
Sbjct 121674 CTCTTTGAAATCATCCTCGCTGCAAACTACCTCGATATCAAGGCTCTTTTGGATGTTGGT 121615
Query 1592228 TGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTT 1592287
|||||| | || ||||| ||||||||||||||||| || ||||| ||||| ||||| ||
Sbjct 121614 TGCAAGACCGTTGCCAATATGATCAAGGGCAAGTCACCAGAGGAAATCCGTAAGACTTTC 121555
Query 1592288 AACAT 1592292
|| ||
Sbjct 121554 AATAT 121550
>seq109
Length=56001
Score = 91.5 bits (100), Expect = 2e-12
Identities = 140/197 (71%), Gaps = 2/197 (1%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| |||| ||||| || | | ||| ||||| || | |||||||||||| || | | ||
Sbjct 15554 GCTTGGCAAGTTCACCTGGGAGGATAAGGCGGACTGAGGTCTGGATCTCTCGGGAGGAGA 15495
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGC-GCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATC 1254461
| ||| |||||| | ||| || || | ||||||||| ||| || ||||
Sbjct 15494 TGGTGGACTTCTTGTTGTA-TGCAGCGAGCTTGGAAGCCTCGGTGGCGACACGCTCGAAG 15436
Query 1254462 ATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGG 1254521
|| ||||||||||| ||||||| || ||||| | ||||||||| || ||| |||
Sbjct 15435 ATATCGTTGACAAAGGAGTTCAAGATAGACATGGCGCGGTTGGAGATACCAGTGTCTGGG 15376
Query 1254522 TGCACCTGCTTGAGCAC 1254538
|| || |||||||| ||
Sbjct 15375 TGGACTTGCTTGAGGAC 15359
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107081590592534
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |