Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq12 122 1e-21 seq109 91.5 2e-12 >seq12 Length=263918 Score = 122 bits (134), Expect = 1e-21 Identities = 102/125 (82%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 1592168 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGG 1592227 |||||||| | |||||||| || ||||||||||| |||||| |||| | ||| |||| Sbjct 121674 CTCTTTGAAATCATCCTCGCTGCAAACTACCTCGATATCAAGGCTCTTTTGGATGTTGGT 121615 Query 1592228 TGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTT 1592287 |||||| | || ||||| ||||||||||||||||| || ||||| ||||| ||||| || Sbjct 121614 TGCAAGACCGTTGCCAATATGATCAAGGGCAAGTCACCAGAGGAAATCCGTAAGACTTTC 121555 Query 1592288 AACAT 1592292 || || Sbjct 121554 AATAT 121550 >seq109 Length=56001 Score = 91.5 bits (100), Expect = 2e-12 Identities = 140/197 (71%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| ||||| || | | ||| ||||| || | |||||||||||| || | | || Sbjct 15554 GCTTGGCAAGTTCACCTGGGAGGATAAGGCGGACTGAGGTCTGGATCTCTCGGGAGGAGA 15495 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGC-GCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATC 1254461 | ||| |||||| | ||| || || | ||||||||| ||| || |||| Sbjct 15494 TGGTGGACTTCTTGTTGTA-TGCAGCGAGCTTGGAAGCCTCGGTGGCGACACGCTCGAAG 15436 Query 1254462 ATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGG 1254521 || ||||||||||| ||||||| || ||||| | ||||||||| || ||| ||| Sbjct 15435 ATATCGTTGACAAAGGAGTTCAAGATAGACATGGCGCGGTTGGAGATACCAGTGTCTGGG 15376 Query 1254522 TGCACCTGCTTGAGCAC 1254538 || || |||||||| || Sbjct 15375 TGGACTTGCTTGAGGAC 15359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107081590592534