Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015-
05-13] 702 sequences; 27,513,354 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq667 134 1e-26
>seq667
Length=237617
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| |||||| | || || | || || ||||| || || || ||||| || | |
Sbjct 143592 ATGCAAATCTTTGTGAAGACTTTGACGGGCAAAACAATCACACTGGAAGTTGAGTCATCA 143533
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|||||| | || | || ||| |||||||| ||||| |||||||| || || |||||
Sbjct 143532 GACACAATTGACAACGTGAAATCCAAGATCCAGGACAAGGAAGGAATTCCACCAGATCAG 143473
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||||| ||||||| || || ||||| |||| ||| ||| |||||||||| ||
Sbjct 143472 CAACGCCTGATCTTCGCAGGTAAACAATTGGAAGATGGCCGAACTTTGTCAGATTACAAT 143413
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||||||||||| || || |||||||||||| |||| || || ||
Sbjct 143412 ATTCAAAAGGAGAGCACTCTCCACTTGGTGTTGAGATTACGTGGTGG 143366
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || ||| | ||||| || || || || | ||||| || | |
Sbjct 143820 ATGCAGATCTTTGTGAAGACGTTGACCGGAAAGACGATCACATTGGAAGTCGAGTCATCA 143761
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || ||| ||||||||||| || || || || || || |||||
Sbjct 143760 GACACGATTGATAACGTGAAATCCAAGATCCAAGATAAGGAGGGGATTCCACCAGATCAG 143701
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||||| |||||||||| || || || ||||| ||| ||| |||||||||| |||
Sbjct 143700 CAACGCCTGATCTTTGCTGGAAAGCAACTGGAAGATGGCCGAACTTTGTCAGATTACAAC 143641
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||||| ||||| ||||| ||| | ||| || |||| || || ||
Sbjct 143640 ATTCAGAAGGAGAGCACACTCCACCTTGTGCTGAGATTACGTGGCGG 143594
Score = 89.7 bits (98), Expect = 5e-13
Identities = 131/184 (71%), Gaps = 1/184 (1%)
Strand=Plus/Minus
Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAA 24787
||||| || || || || || || || ||| | |||| || | || | || ||
Sbjct 144308 ACCGGAAAGACCATCACTCTTGAGGTCGAATCTTCCGATACTATCGACAATGTCAAGTCC 144249
Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847
||||| || ||||| || || || |||||||| ||||||||| ||||||||||||| |||
Sbjct 144248 AAGATTCAGGACAAGGAGGGCATTCCTCCCGACCAACAACGTCTGATCTTTGCCGGCAAA 144189
Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACA- 24906
|| || || ||| | | || ||||| |||||||| ||||| || || || ||
Sbjct 144188 CAACTCGAAGATGGTCGCACTCTGAGCGATTACAACATTCAGAAGGAGTCTACTCTCCAT 144129
Query 24907 CTTG 24910
||||
Sbjct 144128 CTTG 144125
Score = 84.2 bits (92), Expect = 2e-11
Identities = 91/121 (75%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 24787 AAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAA 24846
||||||||| ||||| || || || || ||||||||||||||| | || || || || ||
Sbjct 143965 AAAGATCCAGGACAAGGAGGGTATCCCACCCGATCAACAACGTCTCATTTTCGCTGGCAA 143906
Query 24847 ACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACA 24906
|| |||||||| | | | |||||||| ||||| || |||||||| || || ||
Sbjct 143905 GCAATTGGAGGATGGCCGTACTCTCTCAGATTACAACATCCAGAAGGAATCTACCCTTCA 143846
Query 24907 C 24907
|
Sbjct 143845 C 143845
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449893652148560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |