Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq667 134 1e-26 >seq667 Length=237617 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| | || || | || || ||||| || || || ||||| || | | Sbjct 143592 ATGCAAATCTTTGTGAAGACTTTGACGGGCAAAACAATCACACTGGAAGTTGAGTCATCA 143533 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | || | || ||| |||||||| ||||| |||||||| || || ||||| Sbjct 143532 GACACAATTGACAACGTGAAATCCAAGATCCAGGACAAGGAAGGAATTCCACCAGATCAG 143473 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||| ||||||| || || ||||| |||| ||| ||| |||||||||| || Sbjct 143472 CAACGCCTGATCTTCGCAGGTAAACAATTGGAAGATGGCCGAACTTTGTCAGATTACAAT 143413 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||||||||| || || |||||||||||| |||| || || || Sbjct 143412 ATTCAAAAGGAGAGCACTCTCCACTTGGTGTTGAGATTACGTGGTGG 143366 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || ||| | ||||| || || || || | ||||| || | | Sbjct 143820 ATGCAGATCTTTGTGAAGACGTTGACCGGAAAGACGATCACATTGGAAGTCGAGTCATCA 143761 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| ||||||||||| || || || || || || ||||| Sbjct 143760 GACACGATTGATAACGTGAAATCCAAGATCCAAGATAAGGAGGGGATTCCACCAGATCAG 143701 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||| |||||||||| || || || ||||| ||| ||| |||||||||| ||| Sbjct 143700 CAACGCCTGATCTTTGCTGGAAAGCAACTGGAAGATGGCCGAACTTTGTCAGATTACAAC 143641 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| ||||| ||||| ||| | ||| || |||| || || || Sbjct 143640 ATTCAGAAGGAGAGCACACTCCACCTTGTGCTGAGATTACGTGGCGG 143594 Score = 89.7 bits (98), Expect = 5e-13 Identities = 131/184 (71%), Gaps = 1/184 (1%) Strand=Plus/Minus Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAA 24787 ||||| || || || || || || || ||| | |||| || | || | || || Sbjct 144308 ACCGGAAAGACCATCACTCTTGAGGTCGAATCTTCCGATACTATCGACAATGTCAAGTCC 144249 Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 ||||| || ||||| || || || |||||||| ||||||||| ||||||||||||| ||| Sbjct 144248 AAGATTCAGGACAAGGAGGGCATTCCTCCCGACCAACAACGTCTGATCTTTGCCGGCAAA 144189 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACA- 24906 || || || ||| | | || ||||| |||||||| ||||| || || || || Sbjct 144188 CAACTCGAAGATGGTCGCACTCTGAGCGATTACAACATTCAGAAGGAGTCTACTCTCCAT 144129 Query 24907 CTTG 24910 |||| Sbjct 144128 CTTG 144125 Score = 84.2 bits (92), Expect = 2e-11 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 24787 AAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAA 24846 ||||||||| ||||| || || || || ||||||||||||||| | || || || || || Sbjct 143965 AAAGATCCAGGACAAGGAGGGTATCCCACCCGATCAACAACGTCTCATTTTCGCTGGCAA 143906 Query 24847 ACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACA 24906 || |||||||| | | | |||||||| ||||| || |||||||| || || || Sbjct 143905 GCAATTGGAGGATGGCCGTACTCTCTCAGATTACAACATCCAGAAGGAATCTACCCTTCA 143846 Query 24907 C 24907 | Sbjct 143845 C 143845 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449893652148560