Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq109 143 4e-28 seq689 125 1e-22 seq12 113 7e-19 seq698 95.1 2e-13 >seq109 Length=56001 Score = 143 bits (158), Expect = 4e-28 Identities = 175/236 (74%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| ||||| || || ||||| || |||||| |||| ||||| || | | Sbjct 15593 TGTACTTGGTGACAGCCTTTGTGCCTTCTGACACAGCGTGCTTGGCAAGTTCACCTGGGA 15534 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 ||| ||||| || | |||||||||||| |||| | ||| ||| |||||| || Sbjct 15533 GGATAAGGCGGACTGAGGTCTGGATCTCTCGGGAGGAGATGGTGGACTTCTTGTT-GTAT 15475 Query 1485590 GC-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTC 1485648 || || || | ||||||||| ||| || |||| || ||||||||||| |||||| Sbjct 15474 GCAGCGAGCTTGGAAGCCTCGGTGGCGACACGCTCGAAGATATCGTTGACAAAGGAGTTC 15415 Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 | ||| ||||| | ||||||||| || ||| ||||| || |||||||| || Sbjct 15414 AAGATAGACATGGCGCGGTTGGAGATACCAGTGTCTGGGTGGACTTGCTTGAGGAC 15359 >seq689 Length=208963 Score = 125 bits (138), Expect = 1e-22 Identities = 230/330 (70%), Gaps = 9/330 (3%) Strand=Plus/Plus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTT-GCTAAAGCAGAGGCCGGGCATGAGGCCGCGCT 794398 ||| || || ||| |||||||||||| | || | | || || ||||| | ||||||| Sbjct 94230 ACCCTCATCACGAGAGATCAATTCGTTAGAGAATGTA-AGACCCGGCATCATACCGCGCT 94288 Query 794399 TCTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAA 794458 |||| | ||| ||||||| ||| |||||||| ||||| ||||| || || |||| Sbjct 94289 TCTTCAACCAGAAGATGGATGCAAAAGAACCCGAGAAGAAGATACCCTCAACCGCAGCAA 94348 Query 794459 AGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGA-TCCACTTCATCGCC 794517 | | ||||| || | || ||| | || || | |||| |||| | || ||| Sbjct 94349 AAGCAACGAGACGTTGAGCGAAA----CAAGATTCTTGGTCTTGAATCCAGTGAATGGCC 94404 Query 794518 CACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCG-CGAAAGAGGTGGTCCTT 794576 || || ||||| || | | | || | || || ||||| |||| || || || Sbjct 94405 CAATCGGCCTTCTTGCGGATACATGGGATGGTATCAATGGCATCGAACAAGTATGTTCT- 94463 Query 794577 CTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTT 794636 || || ||||| | ||| ||||||||||| || ||||| ||||||||||||||||| Sbjct 94464 CTGCTTTGGCTCCTTAATGTATGTGTCGATGAGAAGAGAGTATGTCTCTGAGTGGATGTT 94523 Query 794637 TTCGATGGCGATCTGGAAGCCATAAAAGCA 794666 || || |||||||||||| || ||||| Sbjct 94524 CTCCATCATGATCTGGAAGCCGTAGAAGCA 94553 >seq12 Length=263918 Score = 113 bits (124), Expect = 7e-19 Identities = 100/125 (80%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 2035629 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGG 2035688 |||||||| | |||||||| || ||||||||||| |||||| | || | ||| | || Sbjct 121674 CTCTTTGAAATCATCCTCGCTGCAAACTACCTCGATATCAAGGCTCTTTTGGATGTTGGT 121615 Query 2035689 TGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTT 2035748 ||||||||||| ||||| | |||||||||||||| || ||||| ||||| ||||| || Sbjct 121614 TGCAAGACCGTTGCCAATATGATCAAGGGCAAGTCACCAGAGGAAATCCGTAAGACTTTC 121555 Query 2035749 AACAT 2035753 || || Sbjct 121554 AATAT 121550 >seq698 Length=89367 Score = 95.1 bits (104), Expect = 2e-13 Identities = 178/259 (69%), Gaps = 2/259 (1%) Strand=Plus/Plus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 |||||| || || | || |||| ||| || |||||||||||||| |||| |||||||| Sbjct 2648 CTGGTCAACGTATCTAGCAGTGTTGTTGAACACGCGGAGCATGGGAACAATACCGTTGGA 2707 Query 2073600 CTCGCCGTTGGTGCCCGCC-ACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGC 2073658 || || || |||||| | ||| | ||| | ||| || | |||| | | | Sbjct 2708 AGAACCATTAGT-CCCGCCAATGTAAGAGCCAGTGGCTCGAATTCTGTGAATGTTGAGAC 2766 Query 2073659 CGATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCT 2073718 |||| || ||||| | ||||||||| | || || | |||| || || ||||| || | Sbjct 2767 CGATACCACCGGCGGTCTTGGAGATCATGGCACAAGTCTTCAAAGTATCATAGATTCCTT 2826 Query 2073719 CGATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGC 2073778 |||| ||| | |||||||| | || ||||| || || | || || | | || | Sbjct 2827 CGATACTGTCCTCTTTCATGTCGATCAAGAAGCATGAGGACATCTGAGGCTGAGGAGTAC 2886 Query 2073779 CGGCATTGAAGAGCGTGGG 2073797 | |||||||| || || || Sbjct 2887 CAGCATTGAAAAGGGTTGG 2905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916171725058178