Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015-
05-13] 702 sequences; 27,513,354 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq109 143 4e-28
seq689 125 1e-22
seq12 113 7e-19
seq698 95.1 2e-13
>seq109
Length=56001
Score = 143 bits (158), Expect = 4e-28
Identities = 175/236 (74%), Gaps = 2/236 (1%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| ||||| || || ||||| || |||||| |||| ||||| || | |
Sbjct 15593 TGTACTTGGTGACAGCCTTTGTGCCTTCTGACACAGCGTGCTTGGCAAGTTCACCTGGGA 15534
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
||| ||||| || | |||||||||||| |||| | ||| ||| |||||| ||
Sbjct 15533 GGATAAGGCGGACTGAGGTCTGGATCTCTCGGGAGGAGATGGTGGACTTCTTGTT-GTAT 15475
Query 1485590 GC-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTC 1485648
|| || || | ||||||||| ||| || |||| || ||||||||||| ||||||
Sbjct 15474 GCAGCGAGCTTGGAAGCCTCGGTGGCGACACGCTCGAAGATATCGTTGACAAAGGAGTTC 15415
Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704
| ||| ||||| | ||||||||| || ||| ||||| || |||||||| ||
Sbjct 15414 AAGATAGACATGGCGCGGTTGGAGATACCAGTGTCTGGGTGGACTTGCTTGAGGAC 15359
>seq689
Length=208963
Score = 125 bits (138), Expect = 1e-22
Identities = 230/330 (70%), Gaps = 9/330 (3%)
Strand=Plus/Plus
Query 794340 ACCTTCGTCGCGACTGATCAATTCGTT-GCTAAAGCAGAGGCCGGGCATGAGGCCGCGCT 794398
||| || || ||| |||||||||||| | || | | || || ||||| | |||||||
Sbjct 94230 ACCCTCATCACGAGAGATCAATTCGTTAGAGAATGTA-AGACCCGGCATCATACCGCGCT 94288
Query 794399 TCTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAA 794458
|||| | ||| ||||||| ||| |||||||| ||||| ||||| || || ||||
Sbjct 94289 TCTTCAACCAGAAGATGGATGCAAAAGAACCCGAGAAGAAGATACCCTCAACCGCAGCAA 94348
Query 794459 AGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGA-TCCACTTCATCGCC 794517
| | ||||| || | || ||| | || || | |||| |||| | || |||
Sbjct 94349 AAGCAACGAGACGTTGAGCGAAA----CAAGATTCTTGGTCTTGAATCCAGTGAATGGCC 94404
Query 794518 CACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCG-CGAAAGAGGTGGTCCTT 794576
|| || ||||| || | | | || | || || ||||| |||| || || ||
Sbjct 94405 CAATCGGCCTTCTTGCGGATACATGGGATGGTATCAATGGCATCGAACAAGTATGTTCT- 94463
Query 794577 CTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTT 794636
|| || ||||| | ||| ||||||||||| || ||||| |||||||||||||||||
Sbjct 94464 CTGCTTTGGCTCCTTAATGTATGTGTCGATGAGAAGAGAGTATGTCTCTGAGTGGATGTT 94523
Query 794637 TTCGATGGCGATCTGGAAGCCATAAAAGCA 794666
|| || |||||||||||| || |||||
Sbjct 94524 CTCCATCATGATCTGGAAGCCGTAGAAGCA 94553
>seq12
Length=263918
Score = 113 bits (124), Expect = 7e-19
Identities = 100/125 (80%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 2035629 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGG 2035688
|||||||| | |||||||| || ||||||||||| |||||| | || | ||| | ||
Sbjct 121674 CTCTTTGAAATCATCCTCGCTGCAAACTACCTCGATATCAAGGCTCTTTTGGATGTTGGT 121615
Query 2035689 TGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTT 2035748
||||||||||| ||||| | |||||||||||||| || ||||| ||||| ||||| ||
Sbjct 121614 TGCAAGACCGTTGCCAATATGATCAAGGGCAAGTCACCAGAGGAAATCCGTAAGACTTTC 121555
Query 2035749 AACAT 2035753
|| ||
Sbjct 121554 AATAT 121550
>seq698
Length=89367
Score = 95.1 bits (104), Expect = 2e-13
Identities = 178/259 (69%), Gaps = 2/259 (1%)
Strand=Plus/Plus
Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599
|||||| || || | || |||| ||| || |||||||||||||| |||| ||||||||
Sbjct 2648 CTGGTCAACGTATCTAGCAGTGTTGTTGAACACGCGGAGCATGGGAACAATACCGTTGGA 2707
Query 2073600 CTCGCCGTTGGTGCCCGCC-ACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGC 2073658
|| || || |||||| | ||| | ||| | ||| || | |||| | | |
Sbjct 2708 AGAACCATTAGT-CCCGCCAATGTAAGAGCCAGTGGCTCGAATTCTGTGAATGTTGAGAC 2766
Query 2073659 CGATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCT 2073718
|||| || ||||| | ||||||||| | || || | |||| || || ||||| || |
Sbjct 2767 CGATACCACCGGCGGTCTTGGAGATCATGGCACAAGTCTTCAAAGTATCATAGATTCCTT 2826
Query 2073719 CGATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGC 2073778
|||| ||| | |||||||| | || ||||| || || | || || | | || |
Sbjct 2827 CGATACTGTCCTCTTTCATGTCGATCAAGAAGCATGAGGACATCTGAGGCTGAGGAGTAC 2886
Query 2073779 CGGCATTGAAGAGCGTGGG 2073797
| |||||||| || || ||
Sbjct 2887 CAGCATTGAAAAGGGTTGG 2905
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916171725058178
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |