Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq667 138 7e-28 seq96 118 7e-22 >seq667 Length=237617 Score = 138 bits (152), Expect = 7e-28 Identities = 168/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 |||| || | || ||||| || ||||| | |||||||||||||||||||| || || | Sbjct 143592 TTCCGCCACGTAATCTCAGCACAAGGTGGAGTGTGCTCTCCTTCTGAATGTTGTAATCTG 143651 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | | | || |||| |||||||||||||| || |||||||| |||||||| ||| | | Sbjct 143652 ACAAAGTTCGGCCATCTTCCAGTTGCTTTCCAGCAAAGATCAGGCGTTGCTGATCTGGTG 143711 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | ||||||||| || | || || ||| ||| | |||| || | ||||| Sbjct 143712 GAATCCCCTCCTTATCTTGGATCTTGGATTTCACGTTATCAATCGTGTCTGATGACTCGA 143771 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | || || |||||||| || | ||||| |||||||||||||| Sbjct 143772 CTTCCAATGTGATCGTCTTTCCGGTCAACGTCTTCACAAAGATCTGCAT 143820 Score = 95.1 bits (104), Expect = 8e-15 Identities = 141/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||||| ||| |||||||| ||||| || || || || | || |||| Sbjct 143837 AGGACAAGGTGAAGGGTAGATTCCTTCTGGATGTTGTAATCTGAGAGAGTACGGCCATCC 143896 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| |||||| || ||||| || || ||||| || || | || | ||||||||||| Sbjct 143897 TCCAATTGCTTGCCAGCGAAAATGAGACGTTGTTGATCGGGTGGGATACCCTCCTTGTCC 143956 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || ||| |||||| | || | || | |||||| |||| ||| |||||| Sbjct 143957 TGGATCTTTGACTTGACGTTGTCGATGGTATCTGAAGACTCGACCTCAAGGGTGATGGTC 144016 Query 34946 TTTCCCGTGAGGGTCTTTAC 34965 || || || || ||||| || Sbjct 144017 TTGCCAGTAAGAGTCTTGAC 144036 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 34760 AACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGC 34819 || |||| |||| ||| | ||||||||||| ||||| || || || || | | || Sbjct 143375 AATCTCAACACCAAGTGGAGAGTGCTCTCCTTTTGAATATTGTAATCTGACAAAGTTCGG 143434 Query 34820 TCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCC 34879 |||| |||| ||| || || ||||||||||| |||||||| ||| | || | || ||| Sbjct 143435 CCATCTTCCAATTGTTTACCTGCGAAGATCAGGCGTTGCTGATCTGGTGGAATTCCTTCC 143494 Query 34880 TTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTT 34939 ||||| | || || ||| ||| | || | || | ||| || || | || Sbjct 143495 TTGTCCTGGATCTTGGATTTCACGTTGTCAATTGTGTCTGATGACTCAACTTCCAGTGTG 143554 Query 34940 ATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || ||||| | ||||| |||||||| ||||| Sbjct 143555 ATTGTTTTGCCCGTCAAAGTCTTCACAAAGATTTGCAT 143592 >seq96 Length=163266 Score = 118 bits (130), Expect = 7e-22 Identities = 160/219 (73%), Gaps = 8/219 (4%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||||| |||| |||||||| ||||| || || || | | || | || Sbjct 52851 AGGACAAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAATCGGACAAAGTACGACCGTCT 52792 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || |||||||| |||||||||||||| ||||| ||||| | || | |||||||| || Sbjct 52791 TCGAGTTGCTTGCCGGCGAAGATCAGACGTTGTTGGTCAGGTGGGATGCCCTCCTTATCC 52732 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT-TCATTGGCC---TCGACATCAACGGTTAT 34941 | || || ||||| || | ||||| || || | || || |||| ||| || Sbjct 52731 TGGATCTTGGACTTGAC--AT--TGTCGATGGTATCGGACGATTCCACCTCAAGGGTGAT 52676 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980 ||||| |||||||||||||| || ||||| |||||||| Sbjct 52675 CGTCTTACCCGTGAGGGTCTTGACGAAGATTTGCATGAT 52637 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325690013494538