Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015-
05-13] 702 sequences; 27,513,354 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq667 138 7e-28
seq96 118 7e-22
>seq667
Length=237617
Score = 138 bits (152), Expect = 7e-28
Identities = 168/229 (73%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808
|||| || | || ||||| || ||||| | |||||||||||||||||||| || || |
Sbjct 143592 TTCCGCCACGTAATCTCAGCACAAGGTGGAGTGTGCTCTCCTTCTGAATGTTGTAATCTG 143651
Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868
| | | || |||| |||||||||||||| || |||||||| |||||||| ||| | |
Sbjct 143652 ACAAAGTTCGGCCATCTTCCAGTTGCTTTCCAGCAAAGATCAGGCGTTGCTGATCTGGTG 143711
Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928
| | ||||||||| || | || || ||| ||| | |||| || | |||||
Sbjct 143712 GAATCCCCTCCTTATCTTGGATCTTGGATTTCACGTTATCAATCGTGTCTGATGACTCGA 143771
Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
| || | || || |||||||| || | ||||| ||||||||||||||
Sbjct 143772 CTTCCAATGTGATCGTCTTTCCGGTCAACGTCTTCACAAAGATCTGCAT 143820
Score = 95.1 bits (104), Expect = 8e-15
Identities = 141/200 (71%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||||| ||| |||||||| ||||| || || || || | || ||||
Sbjct 143837 AGGACAAGGTGAAGGGTAGATTCCTTCTGGATGTTGTAATCTGAGAGAGTACGGCCATCC 143896
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|||| |||||| || ||||| || || ||||| || || | || | |||||||||||
Sbjct 143897 TCCAATTGCTTGCCAGCGAAAATGAGACGTTGTTGATCGGGTGGGATACCCTCCTTGTCC 143956
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || ||| |||||| | || | || | |||||| |||| ||| ||||||
Sbjct 143957 TGGATCTTTGACTTGACGTTGTCGATGGTATCTGAAGACTCGACCTCAAGGGTGATGGTC 144016
Query 34946 TTTCCCGTGAGGGTCTTTAC 34965
|| || || || ||||| ||
Sbjct 144017 TTGCCAGTAAGAGTCTTGAC 144036
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 34760 AACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGC 34819
|| |||| |||| ||| | ||||||||||| ||||| || || || || | | ||
Sbjct 143375 AATCTCAACACCAAGTGGAGAGTGCTCTCCTTTTGAATATTGTAATCTGACAAAGTTCGG 143434
Query 34820 TCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCC 34879
|||| |||| ||| || || ||||||||||| |||||||| ||| | || | || |||
Sbjct 143435 CCATCTTCCAATTGTTTACCTGCGAAGATCAGGCGTTGCTGATCTGGTGGAATTCCTTCC 143494
Query 34880 TTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTT 34939
||||| | || || ||| ||| | || | || | ||| || || | ||
Sbjct 143495 TTGTCCTGGATCTTGGATTTCACGTTGTCAATTGTGTCTGATGACTCAACTTCCAGTGTG 143554
Query 34940 ATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || ||||| | ||||| |||||||| |||||
Sbjct 143555 ATTGTTTTGCCCGTCAAAGTCTTCACAAAGATTTGCAT 143592
>seq96
Length=163266
Score = 118 bits (130), Expect = 7e-22
Identities = 160/219 (73%), Gaps = 8/219 (4%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||||| |||| |||||||| ||||| || || || | | || | ||
Sbjct 52851 AGGACAAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAATCGGACAAAGTACGACCGTCT 52792
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| |||||||| |||||||||||||| ||||| ||||| | || | |||||||| ||
Sbjct 52791 TCGAGTTGCTTGCCGGCGAAGATCAGACGTTGTTGGTCAGGTGGGATGCCCTCCTTATCC 52732
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT-TCATTGGCC---TCGACATCAACGGTTAT 34941
| || || ||||| || | ||||| || || | || || |||| ||| ||
Sbjct 52731 TGGATCTTGGACTTGAC--AT--TGTCGATGGTATCGGACGATTCCACCTCAAGGGTGAT 52676
Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980
||||| |||||||||||||| || ||||| ||||||||
Sbjct 52675 CGTCTTACCCGTGAGGGTCTTGACGAAGATTTGCATGAT 52637
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325690013494538
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |