Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq681 226 2e-53 seq279 87.8 1e-11 >seq681 Length=139357 Score = 226 bits (250), Expect = 2e-53 Identities = 903/1405 (64%), Gaps = 25/1405 (2%) Strand=Plus/Minus Query 281426 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 281485 |||| || || | |||||| |||||||| | ||| || || || |||||||| || || Sbjct 110890 GCAGAAACGTTCATAATACCGTTGGCATCAAGATCGAAGGTAACCTCAATTTGTGGAACA 110831 Query 281486 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATT--AAATGTTCCCAGATTATTATTATCTT 281543 || | |||| |||||||| || | ||| | ||| |||| || || || || | Sbjct 110830 CCGCGAGGAGCCGGTGGGATACC--CGAAAGTTCAAACTTTCCGAGCAGGTTGTTGTCCT 110773 Query 281544 TAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAAT 281603 | ||| || |||||||| ||| ||| || || ||| ||| || || || | Sbjct 110772 TGGTGCGGGCACGCTCACCCTCATAAACTTGAATGAGCACACCAGGTTGGTTGTCAGAGT 110713 Query 281604 AAGTTGTAAATA-CTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTG 281662 | || | ||| ||||| | || || || ||||| ||||| | | |||| | Sbjct 110712 ATGTGGAGAATGTCTCTG-ACTTCTTCGTTGGGATTGTAGTGTTGCGCTTGATAAGAGGT 110654 Query 281663 GTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACA 281722 ||||||| ||| ||||| || || | ||| ||||| | || | |||||| | || | | Sbjct 110653 GTCATAACACCGCCAGCAGTCTCGATACCGAGAGACAATGGGGCGACATCGAGAAGAAGA 110594 Query 281723 ATAT--TTTGAAGTTTTTCATCA-GTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCA 281779 || | || | | || | | || | ||| ||||| || || || | ||||||| Sbjct 110593 ATTTCGTTGGTGGACTTGGAGGATGTGTCACCTGAGAGAATGGCAGCCTGGACAGCAGCA 110534 Query 281780 CCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAA 281839 || || |||||||| |||||||| || | || | ||| | | || || ||||| || Sbjct 110533 CCGTAGGCAACAGCCTCATCAGGGTTGATAGACTTGTTTGGCTCCTTGCCGTTGAAGAAG 110474 Query 281840 TTTGAAAGAAGTTGTCT---TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATT 281896 | || | ||| | ||| ||| || ||||| | || |||||||| || |||||| Sbjct 110473 TCGGAGACAAGCT-TCTGGATACGC--GGGATACGGGTGGAACCTCCAACCAAGACAATT 110417 Query 281897 TCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGA 281956 ||||| || |||||| || | ||| | ||| | || ||||| || || | Sbjct 110416 TCATGGACAGATGATTTGTCGATTTTAGCATCACGGAGGACACGCTCAACTGGCTCCATG 110357 Query 281957 CCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTA 282016 | | || | |||| || ||||| || || ||| | || | | | || Sbjct 110356 GTGGAGCGGAAGAGGTCTTGGCAGAGTTCCTCAAAGCGAGCACGGGTGATTGAGGTATAG 110297 Query 282017 TAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGT 282076 ||||||| || ||||| | ||| || | |||||| | ||||| | ||||||||||| Sbjct 110296 AAATCAATACCCTCGAAAAGAGAGTCGATTTCAATAGATGTTTGTGCTGAAGAAGATAGG 110237 Query 282077 GCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTC 282136 | ||| || ||||| || || ||||| | || | ||| | || || | | Sbjct 110236 GTACGCTTGGCACGCTCGCAAGCTGTTCGGAGACGTCGGAGAGCACGTGGGCTACCAGTG 110177 Query 282137 AAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCA 282196 | ||| | || | ||||||||||| || | ||| | | ||||| || || ||| Sbjct 110176 AGATCCTTCTTGTGCTTTCTCTTGAACTCGTTGACAAAGTGGTTGACAAGGCGGTTGTCA 110117 Query 282197 AAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCT 282256 || || ||||| ||||| | ||| | || | |||| | || | || | || || Sbjct 110116 AAGTCCTCACCACCCAAGTGAGTGTCGCCAGCAGTAGACTTCACCTCAAAGATGCCTTCC 110057 Query 282257 TCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTC 282316 |||| | |||||| | ||||| || |||||||||| ||| ||||| || || || Sbjct 110056 TCAATGGTCAAAAGGGAGACATCGAAAGTGCCACCACCCAAATCGAAAATGAGGACGTTG 109997 Query 282317 ATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTA 282376 ||| || ||||| || ||||| || |||| ||||| || ||||| || || Sbjct 109996 CGCTCTCCTTCGGCCTTTTTGTCGAGACCGTATGCAATCGCAGCTGCTGTTGGCTCGTTG 109937 Query 282377 ATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGT 282436 || || | | || || | ||||||||| ||||| || || |||||||| | || Sbjct 109936 ATGATACGGAGCACGTTCAAACCAGCAATGAGACCTGCGTCCTTGGTGGCTTGACGCTGA 109877 Query 282437 GAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTT-ACTTCTTTTCCAATATA 282495 || || || || || || || || || | || || | |||| ||| | || | ||| Sbjct 109876 GAGTCATTGAAGTAAGCTGGGACTGTGACGACAGCGT-TGTTGACTGTTCCACCGAGATA 109818 Query 282496 AGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATA 282555 || ||| || | |||| || | ||||| | || ||||| | ||| || | | | Sbjct 109817 TGCCTCTGCGGTCTCCCTCATCTTCGTCAAAATGAAGGAAGAAATCTCTTCAGGGGTAAA 109758 Query 282556 TTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAA--TA 282613 ||| ||| | |||| || || | | || |||| || | | | | Sbjct 109757 CGACTTCTGTTCTCCCTTATATTCAACCTCTATAACAGGCTTAT--CCCCCTTGGAGGTC 109700 Query 282614 ACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTG--GTCATTAAAATCTCTAC 282671 || || ||||| | | ||||| || | || ||||| | ||| || || | | || Sbjct 109699 ACCTTGAATGGAAAGTGCTTCATGTCGGCCTG--CACTTCGGCGTCGTTGAACTTGCGAC 109642 Query 282672 CAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGG 282731 | || | || ||||| || || | ||| ||| ||||| | ||| |||| | ||||| Sbjct 109641 CGATGAGACGCTTTGCGTCGAAGACAGTGTTGTGGGGATTCATGGCAACTTGGTTTTTGG 109582 Query 282732 CTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGAT 282791 | | || || |||||| |||| || ||||| |||| || | || || || || || | Sbjct 109581 CCGAGTCACCGATCAGACGTTCAGTATCTGTGAATGCCACGAACGAGGGCGTGGTTCGGT 109522 Query 282792 TACCTTGATCATTCGCAATAATTTC 282816 | || || || || || || ||||| Sbjct 109521 TGCCCTGGTCGTTGGCGATGATTTC 109497 >seq279 Length=267861 Score = 87.8 bits (96), Expect = 1e-11 Identities = 99/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 282339 CAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGAC 282398 ||||||| || |||| ||||||||||||||| || || || || | | ||| ||||| | Sbjct 219080 CAAGACCGTAGGCAATAGCAGCAGCAGTTGGCTCGTTGATGATACGGAGAACGTTAAGTC 219139 Query 282399 CAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAA 282458 ||||||| || || || || |||||||| | ||| ||||| || || || || | Sbjct 219140 CAGCAATAGCACCAGCGTCCTTGGTGGCTTGACGTTGGTTGTCGTTGAAGTAGGCTGGCA 219199 Query 282459 CAGTAATAACGGC 282471 ||||||| || || Sbjct 219200 CAGTAATGACTGC 219212 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740595934766652