Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015-
05-13] 702 sequences; 27,513,354 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq681 226 2e-53
seq279 87.8 1e-11
>seq681
Length=139357
Score = 226 bits (250), Expect = 2e-53
Identities = 903/1405 (64%), Gaps = 25/1405 (2%)
Strand=Plus/Minus
Query 281426 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 281485
|||| || || | |||||| |||||||| | ||| || || || |||||||| || ||
Sbjct 110890 GCAGAAACGTTCATAATACCGTTGGCATCAAGATCGAAGGTAACCTCAATTTGTGGAACA 110831
Query 281486 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATT--AAATGTTCCCAGATTATTATTATCTT 281543
|| | |||| |||||||| || | ||| | ||| |||| || || || || |
Sbjct 110830 CCGCGAGGAGCCGGTGGGATACC--CGAAAGTTCAAACTTTCCGAGCAGGTTGTTGTCCT 110773
Query 281544 TAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAAT 281603
| ||| || |||||||| ||| ||| || || ||| ||| || || || |
Sbjct 110772 TGGTGCGGGCACGCTCACCCTCATAAACTTGAATGAGCACACCAGGTTGGTTGTCAGAGT 110713
Query 281604 AAGTTGTAAATA-CTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTG 281662
| || | ||| ||||| | || || || ||||| ||||| | | |||| |
Sbjct 110712 ATGTGGAGAATGTCTCTG-ACTTCTTCGTTGGGATTGTAGTGTTGCGCTTGATAAGAGGT 110654
Query 281663 GTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACA 281722
||||||| ||| ||||| || || | ||| ||||| | || | |||||| | || | |
Sbjct 110653 GTCATAACACCGCCAGCAGTCTCGATACCGAGAGACAATGGGGCGACATCGAGAAGAAGA 110594
Query 281723 ATAT--TTTGAAGTTTTTCATCA-GTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCA 281779
|| | || | | || | | || | ||| ||||| || || || | |||||||
Sbjct 110593 ATTTCGTTGGTGGACTTGGAGGATGTGTCACCTGAGAGAATGGCAGCCTGGACAGCAGCA 110534
Query 281780 CCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAA 281839
|| || |||||||| |||||||| || | || | ||| | | || || ||||| ||
Sbjct 110533 CCGTAGGCAACAGCCTCATCAGGGTTGATAGACTTGTTTGGCTCCTTGCCGTTGAAGAAG 110474
Query 281840 TTTGAAAGAAGTTGTCT---TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATT 281896
| || | ||| | ||| ||| || ||||| | || |||||||| || ||||||
Sbjct 110473 TCGGAGACAAGCT-TCTGGATACGC--GGGATACGGGTGGAACCTCCAACCAAGACAATT 110417
Query 281897 TCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGA 281956
||||| || |||||| || | ||| | ||| | || ||||| || || |
Sbjct 110416 TCATGGACAGATGATTTGTCGATTTTAGCATCACGGAGGACACGCTCAACTGGCTCCATG 110357
Query 281957 CCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTA 282016
| | || | |||| || ||||| || || ||| | || | | | ||
Sbjct 110356 GTGGAGCGGAAGAGGTCTTGGCAGAGTTCCTCAAAGCGAGCACGGGTGATTGAGGTATAG 110297
Query 282017 TAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGT 282076
||||||| || ||||| | ||| || | |||||| | ||||| | |||||||||||
Sbjct 110296 AAATCAATACCCTCGAAAAGAGAGTCGATTTCAATAGATGTTTGTGCTGAAGAAGATAGG 110237
Query 282077 GCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTC 282136
| ||| || ||||| || || ||||| | || | ||| | || || | |
Sbjct 110236 GTACGCTTGGCACGCTCGCAAGCTGTTCGGAGACGTCGGAGAGCACGTGGGCTACCAGTG 110177
Query 282137 AAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCA 282196
| ||| | || | ||||||||||| || | ||| | | ||||| || || |||
Sbjct 110176 AGATCCTTCTTGTGCTTTCTCTTGAACTCGTTGACAAAGTGGTTGACAAGGCGGTTGTCA 110117
Query 282197 AAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCT 282256
|| || ||||| ||||| | ||| | || | |||| | || | || | || ||
Sbjct 110116 AAGTCCTCACCACCCAAGTGAGTGTCGCCAGCAGTAGACTTCACCTCAAAGATGCCTTCC 110057
Query 282257 TCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTC 282316
|||| | |||||| | ||||| || |||||||||| ||| ||||| || || ||
Sbjct 110056 TCAATGGTCAAAAGGGAGACATCGAAAGTGCCACCACCCAAATCGAAAATGAGGACGTTG 109997
Query 282317 ATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTA 282376
||| || ||||| || ||||| || |||| ||||| || ||||| || ||
Sbjct 109996 CGCTCTCCTTCGGCCTTTTTGTCGAGACCGTATGCAATCGCAGCTGCTGTTGGCTCGTTG 109937
Query 282377 ATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGT 282436
|| || | | || || | ||||||||| ||||| || || |||||||| | ||
Sbjct 109936 ATGATACGGAGCACGTTCAAACCAGCAATGAGACCTGCGTCCTTGGTGGCTTGACGCTGA 109877
Query 282437 GAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTT-ACTTCTTTTCCAATATA 282495
|| || || || || || || || || | || || | |||| ||| | || | |||
Sbjct 109876 GAGTCATTGAAGTAAGCTGGGACTGTGACGACAGCGT-TGTTGACTGTTCCACCGAGATA 109818
Query 282496 AGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATA 282555
|| ||| || | |||| || | ||||| | || ||||| | ||| || | | |
Sbjct 109817 TGCCTCTGCGGTCTCCCTCATCTTCGTCAAAATGAAGGAAGAAATCTCTTCAGGGGTAAA 109758
Query 282556 TTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAA--TA 282613
||| ||| | |||| || || | | || |||| || | | | |
Sbjct 109757 CGACTTCTGTTCTCCCTTATATTCAACCTCTATAACAGGCTTAT--CCCCCTTGGAGGTC 109700
Query 282614 ACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTG--GTCATTAAAATCTCTAC 282671
|| || ||||| | | ||||| || | || ||||| | ||| || || | | ||
Sbjct 109699 ACCTTGAATGGAAAGTGCTTCATGTCGGCCTG--CACTTCGGCGTCGTTGAACTTGCGAC 109642
Query 282672 CAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGG 282731
| || | || ||||| || || | ||| ||| ||||| | ||| |||| | |||||
Sbjct 109641 CGATGAGACGCTTTGCGTCGAAGACAGTGTTGTGGGGATTCATGGCAACTTGGTTTTTGG 109582
Query 282732 CTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGAT 282791
| | || || |||||| |||| || ||||| |||| || | || || || || || |
Sbjct 109581 CCGAGTCACCGATCAGACGTTCAGTATCTGTGAATGCCACGAACGAGGGCGTGGTTCGGT 109522
Query 282792 TACCTTGATCATTCGCAATAATTTC 282816
| || || || || || || |||||
Sbjct 109521 TGCCCTGGTCGTTGGCGATGATTTC 109497
>seq279
Length=267861
Score = 87.8 bits (96), Expect = 1e-11
Identities = 99/133 (74%), Gaps = 0/133 (0%)
Strand=Plus/Plus
Query 282339 CAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGAC 282398
||||||| || |||| ||||||||||||||| || || || || | | ||| ||||| |
Sbjct 219080 CAAGACCGTAGGCAATAGCAGCAGCAGTTGGCTCGTTGATGATACGGAGAACGTTAAGTC 219139
Query 282399 CAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAA 282458
||||||| || || || || |||||||| | ||| ||||| || || || || |
Sbjct 219140 CAGCAATAGCACCAGCGTCCTTGGTGGCTTGACGTTGGTTGTCGTTGAAGTAGGCTGGCA 219199
Query 282459 CAGTAATAACGGC 282471
||||||| || ||
Sbjct 219200 CAGTAATGACTGC 219212
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3740595934766652
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |