Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq667 102 8e-17 >seq667 Length=237617 Score = 102 bits (112), Expect = 8e-17 Identities = 85/104 (82%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274 ||||| || || || |||||||||||||||| |||| |||||||||||||| || Sbjct 144136 GTAGACTCCTTCTGAATGTTGTAATCGCTCAGAGTGCGACCATCTTCGAGTTGTTTGCCG 144195 Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 137318 ||| ||||||||||||| || |||||||| ||||| || ||||| Sbjct 144196 GCAAAGATCAGACGTTGTTGGTCGGGAGGAATGCCCTCCTTGTC 144239 Score = 86.0 bits (94), Expect = 6e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 137221 TCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAG 137280 || || || ||||||||||| || || | ||||| ||||| || |||||| || Sbjct 143630 TCCTTCTGAATGTTGTAATCTGACAAAGTTCGGCCATCTTCCAGTTGCTTTCCAGCAAAG 143689 Query 137281 ATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGT 137340 ||||| ||||||||||| || || || || || || || || || ||| | | Sbjct 143690 ATCAGGCGTTGCTGATCTGGTGGAATCCCCTCCTTATCTTGGATCTTGGATTTCACGTTA 143749 Query 137341 TCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACG 137400 || | |||||||| | || ||||| | || | |||||| |||||||| || || || Sbjct 143750 TCAATCGTGTCTGATGACTCGACTTCCAATGTGATCGTCTTTCCGGTCAACGTCTTCACA 143809 Query 137401 AATATTTGCATA 137412 || || |||||| Sbjct 143810 AAGATCTGCATA 143821 Score = 82.4 bits (90), Expect = 7e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 137182 TGGCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCG 137241 || || || ||||| | ||| || || || | || || ||||| || |||||||| Sbjct 143363 TGACCACCACGTAATCTCAACACCAAGTGGAGAGTGCTCTCCTTTTGAATATTGTAATCT 143422 Query 137242 CTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 137301 || || | ||||| | ||||||||| || ||||||| ||||||||||| || Sbjct 143423 GACAAAGTTCGGCCATCTTCCAATTGTTTACCTGCGAAGATCAGGCGTTGCTGATCTGGT 143482 Query 137302 GGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCT 137361 || || ||||| ||||| || || ||| | | || | ||||||| | || Sbjct 143483 GGAATTCCTTCCTTGTCCTGGATCTTGGATTTCACGTTGTCAATTGTGTCTGATGACTCA 143542 Query 137362 ACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 ||||| | || | || ||||| ||||| || || || || |||||||| Sbjct 143543 ACTTCCAGTGTGATTGTTTTGCCCGTCAAAGTCTTCACAAAGATTTGCAT 143592 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488539713026400