Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq667 159 7e-34 >seq667 Length=237617 Score = 159 bits (176), Expect = 7e-34 Identities = 150/191 (79%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 82620 TCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAG 82679 || ||||| || || ||||| || | | ||| || ||||| ||||| |||||||||||| Sbjct 143630 TCCTTCTGAATGTTGTAATCTGACAAAGTTCGGCCATCTTCCAGTTGCTTTCCAGCAAAG 143689 Query 82680 ATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTT 82739 || || | ||| |||||||| || || || ||||||||||| ||||| | ||| || || Sbjct 143690 ATCAGGCGTTGCTGATCTGGTGGAATCCCCTCCTTATCTTGGATCTTGGATTTCACGTTA 143749 Query 82740 TCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACA 82799 |||||||| || | || |||||||| || |||||||| || ||||||||||| ||| Sbjct 143750 TCAATCGTGTCTGATGACTCGACTTCCAATGTGATCGTCTTTCCGGTCAACGTCTTCACA 143809 Query 82800 AATATCTGCAT 82810 || |||||||| Sbjct 143810 AAGATCTGCAT 143820 Score = 131 bits (144), Expect = 3e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 82602 ACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCT 82661 || ||||| ||||| || || || ||||| ||||| || | | ||| || ||||| Sbjct 143384 ACCAAGTGGAGAGTGCTCTCCTTTTGAATATTGTAATCTGACAAAGTTCGGCCATCTTCC 143443 Query 82662 AGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGA 82721 | |||||| || || ||||| || | ||| |||||||| || ||||||||||| || || Sbjct 143444 AATTGTTTACCTGCGAAGATCAGGCGTTGCTGATCTGGTGGAATTCCTTCCTTGTCCTGG 143503 Query 82722 ATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTG 82781 ||||| | ||| || || ||||| || || | || ||||||| || || || ||| Sbjct 143504 ATCTTGGATTTCACGTTGTCAATTGTGTCTGATGACTCAACTTCCAGTGTGATTGTTTTG 143563 Query 82782 CCTGTCAACGTCTTTACAAATATCTGCATT 82811 || ||||| ||||| ||||| || |||||| Sbjct 143564 CCCGTCAAAGTCTTCACAAAGATTTGCATT 143593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981818369077978