Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015-
05-13] 702 sequences; 27,513,354 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq698 156 4e-33
seq623 84.2 2e-11
seq667 82.4 7e-11
>seq698
Length=89367
Score = 156 bits (172), Expect = 4e-33
Identities = 617/961 (64%), Gaps = 21/961 (2%)
Strand=Plus/Plus
Query 148827 GAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCAC 148886
|| || |||||||| || || ||||| || || ||||||| | || |||| |||
Sbjct 2169 GAAGCGAGATTGCAAACAGCGACTTCATCTGGAGCAGTGTACTCAATAATTTCGGTACAC 2228
Query 148887 AGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCC 148946
| || || ||||| |||| |||||||||||||||||| | |||||| || |||
Sbjct 2229 AAGTTAGAGCTCTTGATAGTACCCAAGTTCTTTTGATTGCTCTTTCGGTTGCAGGCATCC 2288
Query 148947 TTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTAT---GAACCGATGC 149003
||||| |||||| | || ||||| || ||| | || | || | ||| | ||
Sbjct 2289 TTGTAGAGCATGAATGGATTTCCAGTCTCGGTCTGTGCCTCGAGGATAGCGTACCAAAGC 2348
Query 149004 AGGTCCTGCGCGCGCACTTGCTGCTCGTAG----CGACCCTCCTGCTCGTATAAAGTATA 149059
| || || || || | |||| | || ||||| || |||||| | |||
Sbjct 2349 ---TTTTGAGCTTTCA--TGGT--TCGTCGACCACGCCCCTCTTGTTCGTATTTGGCATA 2401
Query 149060 CAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACAT 149119
|| ||| || | || || ||| ||| | ||||| || || || ||||| |
Sbjct 2402 AAGGACCTCAAATTCATCTCCATAGACGTCGGCTAGACCTGGAGCCTCATGAGGGCAGAA 2461
Query 149120 GAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGC 149179
| | |||| | | | | || || |||||||| ||||| || | ||| || ||
Sbjct 2462 CAAAGTCCACTCTTGATTCTTTTCAACTCGTTTCATAAAAAGATCAGGAATCCAAAGAGC 2521
Query 149180 GTACATGAGGTCGCGCGCCTTGCAGT-CTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCA 149238
|| | ||||| || || | | | | |||| ||| ||| ||| |||| || |
Sbjct 2522 ATAGAAAAGGTCACGAGC-TCGTACTTCTTCCTTGCCGTGGTTCTTGCGGAGGTCAAGGA 2580
Query 149239 CGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGCTTG- 149297
||| | ||||| |||||| ||||||| ||| | || | || || || |||
Sbjct 2581 ATTCGAAAACGTCCGAGTGCCATGGCTCAAGGTAAATGGCAAAAGCACCTGGTCGTTTGT 2640
Query 149298 --CCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGC 149355
|| |||||||| |||| | | ||||||| ||||| || | ||| || |||| |
Sbjct 2641 TGCCACCCTGGTCAACGTATCTAGCAGTGTTGTTGAACACGCGGAGCATGGGAACAATAC 2700
Query 149356 CACTGGCAGTGCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCACGT 149415
| ||| || || ||||| || |||| | ||| ||||| | | |||| | ||
Sbjct 2701 CGTTGGAAGAACCATTAGTCCCGCCAATGTAAGAGCCAGTGGCTCGAATTCTGTGAATGT 2760
Query 149416 TGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCA-GTCGCCGAGCGTCGAGTAG 149474
||| ||||| || ||| || ||| ||||| || || ||| | | || |||
Sbjct 2761 TGAGACCGATACCACCGGCGGTCTTGGAGATCATGGCACAAGTCTTCAAA-GTATCATAG 2819
Query 149475 ATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAAA 149534
|| || ||||| ||||| |||||| | || ||||| ||| |||| || || |
Sbjct 2820 ATTCCTTCGATACTGTCCTCTTTCATGTCGATCAAGAAGCATGAGGACATCTGAGGCTGA 2879
Query 149535 CGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCATCATC 149594
| || || || ||| | ||| ||| ||||| || || ||| || | |
Sbjct 2880 GGAGTACCAGCATTGAAAAGGGTTGGGGAAGCGTGGGTGAATGTCTTCAACGACAAAAGC 2939
Query 149595 TCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCGCATC 149654
| ||| | || | || || || |||||||| || ||| || | || || ||||||
Sbjct 2940 TTGTAGGTTTCCAAGACACGTTCAATGTCATCACCCCAGATACCAACAGCAACACGCATC 2999
Query 149655 AGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGCCGTTTTCT 149714
||||| || || |||||||| || ||||| ||||| ||||| | ||| ||||
Sbjct 3000 AGCATGTGTTGTGGTCGCTCAGCTGGCTTGTTACCAATCTTGAGTAGGTATGATCTTTCC 3059
Query 149715 AGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGCGGCGTCG 149774
| ||||||| | ||||| || | |||| |||||| | | ||| | | || || | || |
Sbjct 3060 ATTGTCTTGAAACCAAAATATTGATAGTTAAAGTCTCTGTCGTAGACGATAGCCGAGTTG 3119
Query 149775 A 149775
|
Sbjct 3120 A 3120
>seq623
Length=266034
Score = 84.2 bits (92), Expect = 2e-11
Identities = 128/180 (71%), Gaps = 2/180 (1%)
Strand=Plus/Minus
Query 133473 TTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGTAAAT 133531
|| || || ||||| |||| || ||| | | | ||||| || |||||||| ||| ||||
Sbjct 249705 TTTTGGATGTTGTAGTCGCTCAAAGTGCGGCCA-TCCTCAAGTTGCTTGCCGGCGAAAAT 249647
Query 133532 GAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTC 133591
|| || || |||||||| || || ||||||||||| ||||| ||||| | ||
Sbjct 249646 CAGACGTTGTTGGTCGGGTGGAATTCCTTCCTTGTCTTGAATCTTGGACTTGACATTGTC 249587
Query 133592 AACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAA 133651
| || |||| | ||||| || | |||| |||||| || || || || || |||||
Sbjct 249586 GATGGTATCGGATGATTCCACCTCAAGAGTGATGGTTTTACCCGTGAGGGTCTTGACGAA 249527
>seq667
Length=237617
Score = 82.4 bits (90), Expect = 7e-11
Identities = 124/174 (71%), Gaps = 2/174 (1%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| ||||| ||||| || |||||||||| || ||| ||| | || ||||| || |||||
Sbjct 144136 GTAGACTCCTTCTGAATGTTGTAATCGCTCAGAGTGCGACCA-TCTTCGAGTTGTTTGCC 144194
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | || || || || ||||||||||| ||||| |||||||| ||||| |||
Sbjct 144195 GGCAAAGATCAGACGTTGTTGGTCGGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTT 144254
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636
|| | || | || |||| | || || || | |||| ||| || |||||
Sbjct 144255 GACATTGTCGATAGTATCGGAAGATTCGACCTCAAGAGTGATGGTCTTTCCGGT 144308
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483416557982480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |