Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq698 156 4e-33 seq623 84.2 2e-11 seq667 82.4 7e-11 >seq698 Length=89367 Score = 156 bits (172), Expect = 4e-33 Identities = 617/961 (64%), Gaps = 21/961 (2%) Strand=Plus/Plus Query 148827 GAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCAC 148886 || || |||||||| || || ||||| || || ||||||| | || |||| ||| Sbjct 2169 GAAGCGAGATTGCAAACAGCGACTTCATCTGGAGCAGTGTACTCAATAATTTCGGTACAC 2228 Query 148887 AGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCC 148946 | || || ||||| |||| |||||||||||||||||| | |||||| || ||| Sbjct 2229 AAGTTAGAGCTCTTGATAGTACCCAAGTTCTTTTGATTGCTCTTTCGGTTGCAGGCATCC 2288 Query 148947 TTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTAT---GAACCGATGC 149003 ||||| |||||| | || ||||| || ||| | || | || | ||| | || Sbjct 2289 TTGTAGAGCATGAATGGATTTCCAGTCTCGGTCTGTGCCTCGAGGATAGCGTACCAAAGC 2348 Query 149004 AGGTCCTGCGCGCGCACTTGCTGCTCGTAG----CGACCCTCCTGCTCGTATAAAGTATA 149059 | || || || || | |||| | || ||||| || |||||| | ||| Sbjct 2349 ---TTTTGAGCTTTCA--TGGT--TCGTCGACCACGCCCCTCTTGTTCGTATTTGGCATA 2401 Query 149060 CAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACAT 149119 || ||| || | || || ||| ||| | ||||| || || || ||||| | Sbjct 2402 AAGGACCTCAAATTCATCTCCATAGACGTCGGCTAGACCTGGAGCCTCATGAGGGCAGAA 2461 Query 149120 GAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGC 149179 | | |||| | | | | || || |||||||| ||||| || | ||| || || Sbjct 2462 CAAAGTCCACTCTTGATTCTTTTCAACTCGTTTCATAAAAAGATCAGGAATCCAAAGAGC 2521 Query 149180 GTACATGAGGTCGCGCGCCTTGCAGT-CTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCA 149238 || | ||||| || || | | | | |||| ||| ||| ||| |||| || | Sbjct 2522 ATAGAAAAGGTCACGAGC-TCGTACTTCTTCCTTGCCGTGGTTCTTGCGGAGGTCAAGGA 2580 Query 149239 CGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGCTTG- 149297 ||| | ||||| |||||| ||||||| ||| | || | || || || ||| Sbjct 2581 ATTCGAAAACGTCCGAGTGCCATGGCTCAAGGTAAATGGCAAAAGCACCTGGTCGTTTGT 2640 Query 149298 --CCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGC 149355 || |||||||| |||| | | ||||||| ||||| || | ||| || |||| | Sbjct 2641 TGCCACCCTGGTCAACGTATCTAGCAGTGTTGTTGAACACGCGGAGCATGGGAACAATAC 2700 Query 149356 CACTGGCAGTGCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCACGT 149415 | ||| || || ||||| || |||| | ||| ||||| | | |||| | || Sbjct 2701 CGTTGGAAGAACCATTAGTCCCGCCAATGTAAGAGCCAGTGGCTCGAATTCTGTGAATGT 2760 Query 149416 TGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCA-GTCGCCGAGCGTCGAGTAG 149474 ||| ||||| || ||| || ||| ||||| || || ||| | | || ||| Sbjct 2761 TGAGACCGATACCACCGGCGGTCTTGGAGATCATGGCACAAGTCTTCAAA-GTATCATAG 2819 Query 149475 ATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAAA 149534 || || ||||| ||||| |||||| | || ||||| ||| |||| || || | Sbjct 2820 ATTCCTTCGATACTGTCCTCTTTCATGTCGATCAAGAAGCATGAGGACATCTGAGGCTGA 2879 Query 149535 CGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCATCATC 149594 | || || || ||| | ||| ||| ||||| || || ||| || | | Sbjct 2880 GGAGTACCAGCATTGAAAAGGGTTGGGGAAGCGTGGGTGAATGTCTTCAACGACAAAAGC 2939 Query 149595 TCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCGCATC 149654 | ||| | || | || || || |||||||| || ||| || | || || |||||| Sbjct 2940 TTGTAGGTTTCCAAGACACGTTCAATGTCATCACCCCAGATACCAACAGCAACACGCATC 2999 Query 149655 AGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGCCGTTTTCT 149714 ||||| || || |||||||| || ||||| ||||| ||||| | ||| |||| Sbjct 3000 AGCATGTGTTGTGGTCGCTCAGCTGGCTTGTTACCAATCTTGAGTAGGTATGATCTTTCC 3059 Query 149715 AGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGCGGCGTCG 149774 | ||||||| | ||||| || | |||| |||||| | | ||| | | || || | || | Sbjct 3060 ATTGTCTTGAAACCAAAATATTGATAGTTAAAGTCTCTGTCGTAGACGATAGCCGAGTTG 3119 Query 149775 A 149775 | Sbjct 3120 A 3120 >seq623 Length=266034 Score = 84.2 bits (92), Expect = 2e-11 Identities = 128/180 (71%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 133473 TTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGTAAAT 133531 || || || ||||| |||| || ||| | | | ||||| || |||||||| ||| |||| Sbjct 249705 TTTTGGATGTTGTAGTCGCTCAAAGTGCGGCCA-TCCTCAAGTTGCTTGCCGGCGAAAAT 249647 Query 133532 GAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTC 133591 || || || |||||||| || || ||||||||||| ||||| ||||| | || Sbjct 249646 CAGACGTTGTTGGTCGGGTGGAATTCCTTCCTTGTCTTGAATCTTGGACTTGACATTGTC 249587 Query 133592 AACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAA 133651 | || |||| | ||||| || | |||| |||||| || || || || || ||||| Sbjct 249586 GATGGTATCGGATGATTCCACCTCAAGAGTGATGGTTTTACCCGTGAGGGTCTTGACGAA 249527 >seq667 Length=237617 Score = 82.4 bits (90), Expect = 7e-11 Identities = 124/174 (71%), Gaps = 2/174 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || |||||||||| || ||| ||| | || ||||| || ||||| Sbjct 144136 GTAGACTCCTTCTGAATGTTGTAATCGCTCAGAGTGCGACCA-TCTTCGAGTTGTTTGCC 144194 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || || || || ||||||||||| ||||| |||||||| ||||| ||| Sbjct 144195 GGCAAAGATCAGACGTTGTTGGTCGGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTT 144254 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 || | || | || |||| | || || || | |||| ||| || ||||| Sbjct 144255 GACATTGTCGATAGTATCGGAAGATTCGACCTCAAGAGTGATGGTCTTTCCGGT 144308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483416557982480