Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq667 118 7e-22 >seq667 Length=237617 Score = 118 bits (130), Expect = 7e-22 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | || | |||||||| || ||||||||||| ||||| || |||||||| || Sbjct 143365 ACCACCACGTAATCTCAACACCAAGTGGAGAGTGCTCTCCTTTTGAATATTGTAATCTGA 143424 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || || | || ||||||||||| || || || |||| || ||||||||| | || Sbjct 143425 CAAAGTTCGGCCATCTTCCAATTGTTTACCTGCGAAGATCAGGCGTTGCTGATCTGGTGG 143484 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||| ||||| || || |||| || | ||| | ||||| ||| || | Sbjct 143485 AATTCCTTCCTTGTCCTGGATCTTGGATTTC-ACGTTGTCAATTGTGTCTGATGACTCAA 143543 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | ||||| ||||| || || || || || |||||||| ||||| Sbjct 143544 CTTCCAGTGTGATTGTTTTGCCCGTCAAAGTCTTCACAAAGATTTGCAT 143592 Score = 98.7 bits (108), Expect = 7e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || || |||||||| || || ||||||||||| || | || || | || |||| ||| Sbjct 143618 TGGAGTGTGCTCTCCTTCTGAATGTTGTAATCTGACAAAGTTCGGCCATCTTCCAGTTGC 143677 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 ||||| ||||| |||| || ||||||||| | || | || || || || || || Sbjct 143678 TTTCCAGCAAAGATCAGGCGTTGCTGATCTGGTGGAATCCCCTCCTTATCTTGGATCTTG 143737 Query 33667 TGTTTCAACATAGTCACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTT 33726 ||||| || | ||||| ||| || || || | |||||||| || || || Sbjct 143738 GATTTCACGTTATCAATCGTGTCTGATGACTCGACTTCCAATGTGATCGTCTTTCCGGTC 143797 Query 33727 AACGTTTTTACAAAGATCTGCATA 33750 ||||| || ||||||||||||||| Sbjct 143798 AACGTCTTCACAAAGATCTGCATA 143821 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328701187731840