Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015-
05-13] 702 sequences; 27,513,354 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq96 105 2e-17
seq667 98.7 2e-15
seq623 93.3 1e-13
>seq96
Length=163266
Score = 105 bits (116), Expect = 2e-17
Identities = 148/208 (71%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
||| || ||||| || || |||||||| | || |||||| || || || ||||
Sbjct 52654 CAAGACCCTCACGGGTAAGACGATCACCCTTGAGGTGGAATCGTCCGATACCATCGACAA 52713
Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||| ||||| || || || || || || || ||| ||| | || |||||
Sbjct 52714 TGTCAAGTCCAAGATCCAGGATAAGGAGGGCATCCCACCTGACCAACAACGTCTGATCTT 52773
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
|||||| ||||| | ||||| || | |||||| ||||||||||| ||||||| || ||
Sbjct 52774 CGCCGGCAAGCAACTCGAAGACGGTCGTACTTTGTCCGATTACAACATCCAGAAGGAATC 52833
Query 206364 TACTCTTCACCTTGTTTTGAGACTTCGA 206391
|| ||||||||||| | | ||||||
Sbjct 52834 CACCCTTCACCTTGTCCTCCGTCTTCGA 52861
>seq667
Length=237617
Score = 98.7 bits (108), Expect = 2e-15
Identities = 134/187 (72%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 206192 TCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGC 206251
|||| ||||| || |||||| | || || ||| ||| || || |||| || |||
Sbjct 144310 TCACCGGAAAGACCATCACTCTTGAGGTCGAATCTTCCGATACTATCGACAATGTCAAGT 144251
Query 206252 AAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAA 206311
|||||||| || || || || ||| || ||| ||| | || ||||| ||||| |
Sbjct 144250 CCAAGATTCAGGACAAGGAGGGCATTCCTCCCGACCAACAACGTCTGATCTTTGCCGGCA 144191
Query 206312 AGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTC 206371
| || | |||||||| | ||| || |||||||||| | ||||| ||||||||||| |
Sbjct 144190 AACAACTCGAAGATGGTCGCACTCTGAGCGATTACAACATTCAGAAGGAGTCTACTCTCC 144131
Query 206372 ACCTTGT 206378
| |||||
Sbjct 144130 ATCTTGT 144124
Score = 86.0 bits (94), Expect = 1e-11
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
|| || ||||| ||||| ||||||| || || |||||| | || || ||
Sbjct 143568 ACGGGCAAAACAATCACACTGGAAGTTGAGTCATCAGACACAATTGACAACGTGAAATCC 143509
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||| || || || ||||||||| || || ||| | || |||||||| || ||
Sbjct 143508 AAGATCCAGGACAAGGAAGGAATTCCACCAGATCAGCAACGCCTGATCTTCGCAGGTAAA 143449
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
|| ||||||||||| | |||||| | |||||||| | || || ||| ||||| |||
Sbjct 143448 CAATTGGAAGATGGCCGAACTTTGTCAGATTACAATATTCAAAAGGAGAGCACTCTCCAC 143389
Query 206374 CTTGTTTTGAGA 206385
| || ||||||
Sbjct 143388 TTGGTGTTGAGA 143377
>seq623
Length=266034
Score = 93.3 bits (102), Expect = 1e-13
Identities = 125/174 (72%), Gaps = 0/174 (0%)
Strand=Plus/Plus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
||| || ||||| || ||||| |||||| | || |||||| || || || ||||
Sbjct 249532 CAAGACCCTCACGGGTAAAACCATCACTCTTGAGGTGGAATCATCCGATACCATCGACAA 249591
Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||| ||||||||||| || ||||||||| || ||| ||| | || || ||
Sbjct 249592 TGTCAAGTCCAAGATTCAAGACAAGGAAGGAATTCCACCCGACCAACAACGTCTGATTTT 249651
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357
|||||| ||||| | || ||||| | |||||| ||| |||||| |||| ||
Sbjct 249652 CGCCGGCAAGCAACTTGAGGATGGCCGCACTTTGAGCGACTACAACATCCAAAA 249705
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181810170260542
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |