Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq667 96.9 3e-15 seq96 86.0 6e-12 >seq667 Length=237617 Score = 96.9 bits (106), Expect = 3e-15 Identities = 125/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 25199 ACCGGAAAATCGATCACGATCGAAGTCGAAGCCAACGATACTATCGAGCAAGTAAAACAA 25258 |||||||| | ||||| | || |||||| | |||||||||||| | || || Sbjct 144308 ACCGGAAAGACCATCACTCTTGAGGTCGAATCTTCCGATACTATCGACAATGTCAAGTCC 144249 Query 25259 AAAATTACCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAA 25318 || ||| || || ||||| || || ||||| || ||| | || || | | ||||||| Sbjct 144248 AAGATTCAGGACAAGGAGGGCATTCCTCCCGACCAACAACGTCTGATCTTTGCCGGCAAA 144189 Query 25319 CAACTCGAAGATGATAGAAATGTCAGCGATTACAATATTCAAAAAGAATCCAC 25371 ||||||||||||| | | | | | ||||||||||| ||||| || || || || Sbjct 144188 CAACTCGAAGATGGTCGCACTCTGAGCGATTACAACATTCAGAAGGAGTCTAC 144136 Score = 82.4 bits (90), Expect = 7e-11 Identities = 168/245 (69%), Gaps = 10/245 (4%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | ||||| || || || || || ||| | ||||| | ||||| || | || | Sbjct 143592 ATGCAAATCTTTGTGAAGACTTTGACGGGCAAAACAATCACACTGGAAGTTGA-GTCATC 143534 Query 25235 -GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 || || || || | || ||| || || || || || || || || || ||||| Sbjct 143533 AGACACAATTGACAACGTGAAATCCAAGATCCAGGACAAGGAAGGAATTCCACCAGATCA 143474 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAAT--GTCAGCGATTAC 25351 |||| | || || | || || |||||| | ||||||| ||| | ||||| ||||| Sbjct 143473 GCAACGCCTGATCTTCGCAGGTAAACAATTGGAAGATGGCCGAACTTTGTCAG--ATTAC 143416 Query 25352 AATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAG----GAAAATG 25407 ||||||||||| || ||| | || || ||||| ||||| | || | | ||||| Sbjct 143415 AATATTCAAAAGGAGAGCACTCTCCACTTGGTGTTGAGATTACGTGGTGGTCAGTAAATG 143356 Query 25408 ATCAT 25412 ||||| Sbjct 143355 ATCAT 143351 >seq96 Length=163266 Score = 86.0 bits (94), Expect = 6e-12 Identities = 143/207 (69%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230 || ||||||| | || || || || | || || || ||||||| | || || ||| | Sbjct 52636 CATCATGCAAATCTTCGTCAAGACCCTCACGGGTAAGACGATCACCCTTGAGGTGGAATC 52695 Query 25231 CAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290 |||||| ||||| | || || || || ||||| ||||| || || || || Sbjct 52696 GTCCGATACCATCGACAATGTCAAGTCCAAGATCCAGGATAAGGAGGGCATCCCACCTGA 52755 Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTA 25350 || ||| | || || | || |||||| ||||||||||| | | | | | | |||||| Sbjct 52756 CCAACAACGTCTGATCTTCGCCGGCAAGCAACTCGAAGACGGTCGTACTTTGTCCGATTA 52815 Query 25351 CAATATTCAAAAAGAATCCACCATTCA 25377 ||| || || || ||||||||| |||| Sbjct 52816 CAACATCCAGAAGGAATCCACCCTTCA 52842 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445090494296640