Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015-
05-13] 702 sequences; 27,513,354 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq667 96.9 3e-15
seq96 86.0 6e-12
>seq667
Length=237617
Score = 96.9 bits (106), Expect = 3e-15
Identities = 125/173 (72%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 25199 ACCGGAAAATCGATCACGATCGAAGTCGAAGCCAACGATACTATCGAGCAAGTAAAACAA 25258
|||||||| | ||||| | || |||||| | |||||||||||| | || ||
Sbjct 144308 ACCGGAAAGACCATCACTCTTGAGGTCGAATCTTCCGATACTATCGACAATGTCAAGTCC 144249
Query 25259 AAAATTACCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAA 25318
|| ||| || || ||||| || || ||||| || ||| | || || | | |||||||
Sbjct 144248 AAGATTCAGGACAAGGAGGGCATTCCTCCCGACCAACAACGTCTGATCTTTGCCGGCAAA 144189
Query 25319 CAACTCGAAGATGATAGAAATGTCAGCGATTACAATATTCAAAAAGAATCCAC 25371
||||||||||||| | | | | | ||||||||||| ||||| || || || ||
Sbjct 144188 CAACTCGAAGATGGTCGCACTCTGAGCGATTACAACATTCAGAAGGAGTCTAC 144136
Score = 82.4 bits (90), Expect = 7e-11
Identities = 168/245 (69%), Gaps = 10/245 (4%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
|||||| | ||||| || || || || || ||| | ||||| | ||||| || | || |
Sbjct 143592 ATGCAAATCTTTGTGAAGACTTTGACGGGCAAAACAATCACACTGGAAGTTGA-GTCATC 143534
Query 25235 -GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293
|| || || || | || ||| || || || || || || || || || |||||
Sbjct 143533 AGACACAATTGACAACGTGAAATCCAAGATCCAGGACAAGGAAGGAATTCCACCAGATCA 143474
Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAAT--GTCAGCGATTAC 25351
|||| | || || | || || |||||| | ||||||| ||| | ||||| |||||
Sbjct 143473 GCAACGCCTGATCTTCGCAGGTAAACAATTGGAAGATGGCCGAACTTTGTCAG--ATTAC 143416
Query 25352 AATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAG----GAAAATG 25407
||||||||||| || ||| | || || ||||| ||||| | || | | |||||
Sbjct 143415 AATATTCAAAAGGAGAGCACTCTCCACTTGGTGTTGAGATTACGTGGTGGTCAGTAAATG 143356
Query 25408 ATCAT 25412
|||||
Sbjct 143355 ATCAT 143351
>seq96
Length=163266
Score = 86.0 bits (94), Expect = 6e-12
Identities = 143/207 (69%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230
|| ||||||| | || || || || | || || || ||||||| | || || ||| |
Sbjct 52636 CATCATGCAAATCTTCGTCAAGACCCTCACGGGTAAGACGATCACCCTTGAGGTGGAATC 52695
Query 25231 CAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290
|||||| ||||| | || || || || ||||| ||||| || || || ||
Sbjct 52696 GTCCGATACCATCGACAATGTCAAGTCCAAGATCCAGGATAAGGAGGGCATCCCACCTGA 52755
Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTA 25350
|| ||| | || || | || |||||| ||||||||||| | | | | | | ||||||
Sbjct 52756 CCAACAACGTCTGATCTTCGCCGGCAAGCAACTCGAAGACGGTCGTACTTTGTCCGATTA 52815
Query 25351 CAATATTCAAAAAGAATCCACCATTCA 25377
||| || || || ||||||||| ||||
Sbjct 52816 CAACATCCAGAAGGAATCCACCCTTCA 52842
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445090494296640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |