Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq689 147 3e-29 seq109 93.3 6e-13 >seq689 Length=208963 Score = 147 bits (162), Expect = 3e-29 Identities = 373/548 (68%), Gaps = 27/548 (5%) Strand=Plus/Minus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| || ||||| || ||||| || ||||| ||||| ||| |||| | Sbjct 94767 GATCTGGCAAATGTAC-AAGAAGGCTGAAGCCTCATTCTGGACTGCCGAAGAGATCGATC 94709 Query 1455835 TCGGCGCCGA----CACGGTCCACTGGGTG--TCGC-TGAGCGACGACGAGCGCCATTTC 1455887 | || |||| ||||| |||| | | ||||| |||||| | ||| Sbjct 94708 TGTCAAAGGATCTTCACG----ACTGGAACAATCGCCTCAATGACGATGAGCGCTACTTC 94653 Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947 ||| || || || ||||| ||| ||||| ||||| || ||| |||||| ||| Sbjct 94652 ATCTCCCATGTTCTTGCCTTCTTT-GCCGCTTCAGATGGTATTGTGAATGAGAACTTGGT 94594 Query 1455948 CGGCCGCTT-TATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGA 1456006 || || || | || || || || | ||||| ||||| | || ||||| ||||||| Sbjct 94593 CGAACGTTTCTCTGGT-GAAGTTCAGGTCCCAGAAGCACGATGCTTCTACGGCTTCCAGA 94535 Query 1456007 TCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGG 1456066 || || || ||||||||||| || || ||||| || || |||||||| ||| | |||| Sbjct 94534 TCATGATGGAGAACATCCACTCAGAGACATACTCTCTTCTCATCGACACATACATTAAGG 94475 Query 1456067 ACCCGGTCGAGAAGGACCACCTCTTTCG-CGCCATCGACACGGTGCCGTCGGTGAGGAAA 1456125 | || || || || || |||| ||||| || || | || | | | || Sbjct 94474 AGCCAAAGCAG-AGAACATACTTGTTCGATGCCATTGATACCATCCCATGTATCCGCAAG 94416 Query 1456126 AAGGCCGACTGGGCGATGAAGTGGA-TCAACAAGGAGGGCCTCGACACTTTGCCGAGCGG 1456184 |||||||| ||||| || | |||| |||| | || || | || || | || Sbjct 94415 AAGGCCGATTGGGCCATTCACTGGATTCAAGACCAAGAATCTTG---TTTCGCTCAACGT 94359 Query 1456185 CTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGC-GCCATCTT 1456242 ||||| | ||||| || || ||||| ||||| |||||||| ||| ||| ||||||| Sbjct 94358 CTCGTTGCTTTTGCTGCGGTTGAGGGTATCTTCTTCTCGGGTTCTTT-TGCATCCATCTT 94300 Query 1456243 TTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGC-AACGAATTTATCAGT 1456301 ||| | ||||||||||| | ||||| ||||| | | || | |||||||| ||| | Sbjct 94299 CTGGTTGAAGAAGCGCGGTATGATGCCGGGTCT--TACATTCTCTAACGAATTGATCTCT 94242 Query 1456302 CGCGACGA 1456309 || || || Sbjct 94241 CGTGATGA 94234 >seq109 Length=56001 Score = 93.3 bits (102), Expect = 6e-13 Identities = 133/187 (71%), Gaps = 8/187 (4%) Strand=Plus/Plus Query 724958 CTCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGG 725017 ||||||| ||||||| ||| ||||||| ||||||||||| || |||| || ||| Sbjct 15391 CTCCAACCGCGCCATGTCTATCTTGAACTCCTTTGTCAACGATATCTTCGAGCGTGTCGC 15450 Query 725018 CACCGAGGCCGGTCGCCTGGCGCGC----TCCAACAAGCGCAACACGATCGGCACGCGCG 725073 ||||||||| || || ||| | ||||||| ||| ||| | | || | Sbjct 15451 CACCGAGGC----TTCCAAGCTCGCTGCATACAACAAGAAGTCCACCATCTCCTCCCGAG 15506 Query 725074 AGATCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCG 725133 ||||||||||| | || ||||| ||| | | || ||||| |||| |||||| || || | Sbjct 15507 AGATCCAGACCTCAGTCCGCCTTATCCTCCCAGGTGAACTTGCCAAGCACGCTGTGTCAG 15566 Query 725134 AGGGCAC 725140 | ||||| Sbjct 15567 AAGGCAC 15573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177743490809724