Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015-
05-13] 702 sequences; 27,513,354 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq96 116 4e-21
seq623 114 1e-20
seq667 113 5e-20
>seq96
Length=163266
Score = 116 bits (128), Expect = 4e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| |||| || || | || ||||| || ||||||||||| || |||||||| |||
Sbjct 52866 CCACCTCGAAGACGGAGGACAAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAATCGGAC 52807
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| || || ||| ||||| || ||||| || || |||| ||| || || || || ||
Sbjct 52806 AAAGTACGACCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGACGTTGTTGGTCAGGTGGG 52747
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || || || || || ||||| ||| | || ||||||||||||||
Sbjct 52746 ATGCCCTCCTTATCCTGGATCTTGGACTTGACATTGTCGATGGTATCGGACGATTCCACC 52687
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || || || ||||| || | || || ||||| ||||||||
Sbjct 52686 TCAAGGGTGATCGTCTTACCCGTGAGGGTCTTGACGAAGATTTGCAT 52640
>seq623
Length=266034
Score = 114 bits (126), Expect = 1e-20
Identities = 134/181 (74%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAA 134583
||||||| ||||||||||||| | ||| | || || || || ||||| || ||||
Sbjct 249707 CCTTTTGGATGTTGTAGTCGCTCAAAGTGCGGCCATCCTCAAGTTGCTTGCCGGCGAAAA 249648
Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643
||| ||| || || ||||| || || ||||| || |||||||| || ||||| ||
Sbjct 249647 TCAGACGTTGTTGGTCGGGTGGAATTCCTTCCTTGTCTTGAATCTTGGACTTGACATTGT 249588
Query 134644 CCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703
| | || ||||| |||||||| || ||||| ||||||||||| || | || || ||||
Sbjct 249587 CGATGGTATCGGATGATTCCACCTCAAGAGTGATGGTTTTACCCGTGAGGGTCTTGACGA 249528
Query 134704 A 134704
|
Sbjct 249527 A 249527
>seq667
Length=237617
Score = 113 bits (124), Expect = 5e-20
Identities = 136/185 (74%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564
|| || || || || || ||||| ||||||||||| |||| | ||| || || |||
Sbjct 144124 ACAAGATGGAGAGTAGACTCCTTCTGAATGTTGTAATCGCTCAGAGTGCGACCATCTTCG 144183
Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624
|| |||||||| ||||| |||| ||| || || ||||| || ||||| || || || |||
Sbjct 144184 AGTTGTTTGCCGGCAAAGATCAGACGTTGTTGGTCGGGAGGAATGCCCTCCTTGTCCTGA 144243
Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684
|| || ||||| ||| | || ||||| ||||| || || ||||| ||||| ||
Sbjct 144244 ATCTTGGACTTGACATTGTCGATAGTATCGGAAGATTCGACCTCAAGAGTGATGGTCTTT 144303
Query 134685 CCGGT 134689
|||||
Sbjct 144304 CCGGT 144308
Score = 102 bits (112), Expect = 8e-17
Identities = 155/218 (71%), Gaps = 2/218 (1%)
Strand=Plus/Plus
Query 134498 TCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAG 134556
|| |||||| | ||| || ||| ||||||||||| ||||| || | ||| | | |
Sbjct 143377 TCTCAACACCAAGTGGAGAGTGCTCTCCTTTTGAATATTGTAATCTGACAAAGTTCGGCC 143436
Query 134557 AGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTT 134616
| || || | ||||| ||||| || |||| || |||||||| || || || ||||| |
Sbjct 143437 A-TCTTCCAATTGTTTACCTGCGAAGATCAGGCGTTGCTGATCTGGTGGAATTCCTTCCT 143495
Query 134617 TTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAA 134676
| || || || || ||| || ||| | |||||| || || || || || || || |
Sbjct 143496 TGTCCTGGATCTTGGATTTCACGTTGTCAATTGTGTCTGATGACTCAACTTCCAGTGTGA 143555
Query 134677 TGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714
| ||||| || || ||||| || || || |||||||||
Sbjct 143556 TTGTTTTGCCCGTCAAAGTCTTCACAAAGATTTGCATT 143593
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505393965129040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |