Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq698 297 3e-75 seq689 190 3e-43 >seq698 Length=89367 Score = 297 bits (328), Expect = 3e-75 Identities = 1213/1894 (64%), Gaps = 45/1894 (2%) Strand=Plus/Plus Query 68374 GTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGA 68433 ||||| ||||| |||| | || | | || || ||||||||||| || || || ||| Sbjct 1257 GTAAATTGAATTGGTGCAGCAGCAGCCATGGTGCGGAGATAGTACATTCCAGTCTTGAGA 1316 Query 68434 CCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATA 68493 || || |||||||| ||| ||||| || | |||| |||| || || Sbjct 1317 CCGAGCTTCCATCCGGCGAAGTGCATGGAAGTGATTTTGCCCATGGTTGGCTCCTTCATG 1376 Query 68494 TGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATA 68553 ||||| |||| |||||| |||||| |||||||| || | || || ||||||| | | Sbjct 1377 TGAATGTTCAATGATTGAGATTGATCAATGAAAGCACCGCGGTCAGCAGCCATTTGAACA 1436 Query 68554 ATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAAGG 68613 || ||| |||||||| | ||||| | | ||||||||| |||| Sbjct 1437 ATTTGACGTTGGCTTATTTCCCAGACGGTCTTGTATAGAGCCTTGATATCAGTAGGAATA 1496 Query 68614 CTCG---TATTTTGAATGGATCCACCATCGGATATAATTATATTCTTGATCTCATCATTC 68670 | | ||| |||||| || |||||| | | |||| | ||||| || | ||| | Sbjct 1497 TTAGGAATATCTTGAATCGAACCACCAGAAGCGACAATTCTGTTCTTCATGTTATCTGAC 1556 Query 68671 CA-----CAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTTGAAATT 68725 || ||| || | | | | | || | | || || || | ||| || | Sbjct 1557 CATAGACCAAGGTTGACA-----AGATCCTTGAGCAAGTATGGGTTGACGACTTGGAACT 1611 Query 68726 CCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTAT 68785 | |||| || || | ||||| |||||| || || ||||| || | | ||||| | Sbjct 1612 CTCCAGCCAAGACGCGACGAGAGTAAATGTTTGATGTGTATGGCTCAAAGCACTCATTGT 1671 Query 68786 TTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTAA 68845 | || ||||| || | ||||| ||||| ||||| || || ||||| | | || | || Sbjct 1672 TACCAAGAATCTGCGAGGTTGAAGCAGTAGGCATTGGAGCAACCAAAAGAGAGTTGCGAA 1731 Query 68846 GACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGATCAGATGGTACAA 68905 |||||| | ||| | | | || || | ||| ||||||||||||| ||| | Sbjct 1732 TACCATGCTTGGCGATATCAGCCTTGAGGCTCTCCCAGTCCCAAAGATCAGTTGGCTTGA 1791 Query 68906 CATTCCAAAGATCGTATTGTAGAATTCCGTT----ACTTGCATATGATCCATTATATGTT 68961 ||||||| | || ||||| || || || | ||| | ||| || ||||| Sbjct 1792 CATTCCACATGTCATATTGAAGGATGCCTTGGGAAACTGG----TGAACCCGCGTATGTC 1847 Query 68962 TCATAAGGTCCTTCCTGTTCAGCTAGTTCACA--ACTTGCCTCTAATGCACCGTAATAAA 69019 || || | ||| | || || ||| || | || || | | || ||| | | ||| | Sbjct 1848 TCGTAGGTTCCCTGCTCTTGAGCAAGCTGGCAGGACATAGTT--AAAGCAGCATGATAGA 1905 Query 69020 TTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGATAATGTA 69079 | || || || |||| | || | | | || || || || || ||| | ||| Sbjct 1906 TGGTCTCAAAGATCTGAGTGTTCAATTGACGAGCCTCGGGAGAGTCAAAAGGAAGACGTA 1965 Query 69080 AAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTTAT 69139 | | ||||||||||| | ||||| || |||| ||| | || | ||| | | ||| Sbjct 1966 ATTTGAGGAATGCATCTGCGAGACCCTGGACACCAAGACCAACTGGACGATGACGCATAT 2025 Query 69140 TTGAACTTTCA-GCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGATTT 69198 | | ||| | |||||||| | || ||||| || | ||| || | || || | ||| Sbjct 2026 T-GCTCTTGCGTGCTTCTGGCACTGGGTAATAGTTGACATCGATGACCTTGTTCAAATTG 2084 Query 69199 CGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAA-TCGTC-CATCTATAA 69256 || || || | || || | |||| |||||| | ||| | | ||| | | Sbjct 2085 CGAGTGACCACCTGGACGACCCGGTGGAGTTCCCCAAAATCGTACTCGCCACTTCTTTCA 2144 Query 69257 CAAACATATTC----AGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAATTT 69312 |||| | | || | | || || ||||| ||||| || || |||| | | Sbjct 2145 TCAACAAAGGCTGGAAGAGAGAGGGAAGCGAGATTGCAAACAGCGACTTCATCTGGAGCA 2204 Query 69313 GCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGA 69372 | || | || || || ||||| | ||| | |||||||| |||| || | ||| Sbjct 2205 GTGTACTCAATAATTTCGGTACACAAGTTAGAGCTCTTGATAGTACCCAAGTTCTTTTGA 2264 Query 69373 TTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGA 69432 || |||||| ||| ||||| |||||||| || || || ||| | ||||| || |||| Sbjct 2265 TTGCTCTTTCGGTTGCAGGCATCCTTGTAGAGCATGAATGGATTTCCAGTCTCGGTCTGT 2324 Query 69433 GATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTGTA--ACGCTTCT 69490 | |||| |||| | ||||| ||| || || | || | | |||| || Sbjct 2325 GCCTCGAGGATAGCGTACCAAAGCTTTTGAGCTTTCATG--GTTCGTCGACCACGCCCCT 2382 Query 69491 CTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAG 69550 ||| ||| |||| | ||| || || ||||||||||| | || || | | || | Sbjct 2383 CTTGTTCGTATTTGGCATAAAGGACCTCAAATTCATCTCCATAGACGTCGGCTAGACCTG 2442 Query 69551 GACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATA 69610 || |||| || || | ||| | |||| | | || | | ||||||||||||||| | Sbjct 2443 GAGCCTCATGAGGGCAGAACAAAGTCCACTCTTGATTCTTTTCAACTCGTTTCATAAAAA 2502 Query 69611 GATCGGGAATCCAAAGAGCTATA-AAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTA 69669 |||| |||||||||||||| ||| || || || | | || |||||| || || Sbjct 2503 GATCAGGAATCCAAAGAGC-ATAGAAAAGGTCACGAGCTCGTACTTCTTCCTTGCCGTGG 2561 Query 69670 ttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCC 69729 || || || || || || || | || || || |||||||| || || || || || Sbjct 2562 TTCTTGCGGAGGTCAAGGAATTCGAAAACGTCCGAGTGCCATGGCTCAAGGTAAATGGCA 2621 Query 69730 ATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACT 69789 | | || |||||||| || || ||||| || | |||||| |||||||| || | || Sbjct 2622 AAAGCACCTGGTCGTTTGTTGCCACCCTGGTCAACGTATCTAGCAGTGTTGTTGAACACG 2681 Query 69790 CTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTT 69849 | ||||| |||| |||||| || || |||||| || || ||| ||| || | Sbjct 2682 CGGAGCATGGGAACAATACCGTTGGAAGAACCATTAGTCCCGCCAATGTAAGAGCCAGTG 2741 Query 69850 GCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAA 69909 || ||||| | ||| ||||| || || || || | || ||||| | |||||| Sbjct 2742 GCTCGAATTCTGTGAATGTTGAGACCGATACCACCGGCGGTCTTGGAGATCATGGCACAA 2801 Query 69910 CGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAG 69969 ||||| || ||||| || || || || || || ||| |||||| | | || || Sbjct 2802 GTCTTCAAAGTATCATAGATTCCTTCGATACTGTCCTCTTTCATGTCGATCAAGAAGCAT 2861 Query 69970 CTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAAC 70029 ||||| ||| | || ||| || ||||| || | || || || ||||| ||||| Sbjct 2862 GAGGACATCTGAGGCTGAGGAGTACCAGCATTGAAAAGGGTTGGGGAAGCGTGGGTGAA- 2920 Query 70030 CATTTTTCA--GAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATC-CCACTGATGA 70086 | |||| || | || ||||| ||||| | | ||| || || ||| | Sbjct 2921 -TGTCTTCAACGACAAAAGCTTGTAGGTTTCCAAGACACGTTCAATGTCATCACCCCAG- 2978 Query 70087 ATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATT 70146 || || | || |||||||||| ||| || || ||||| || | | || ||| || Sbjct 2979 ATACCAACAGCAACACGCATCAGCATGTGTTGTGGTCGCTCAGCTGGCTTGTTACCAATC 3038 Query 70147 TTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTT 70206 || | ||||||||| |||||| || || || |||||||| | || ||||||||| Sbjct 3039 TTGAGTAGGTATGATCTTTCCATTGTCTTGAAACCAAAATATTGATAGTTAAAGTCTCTG 3098 Query 70207 TCGTAAATAATAACAGAATTTAGTTTATCCTTAT 70240 ||||| | ||| | || || | || ||||| || Sbjct 3099 TCGTAGACGATAGCCGAGTTGAATTCATCCTCAT 3132 >seq689 Length=208963 Score = 190 bits (210), Expect = 3e-43 Identities = 560/854 (66%), Gaps = 18/854 (2%) Strand=Plus/Plus Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385 |||||||| |||||||| || ||||| || || || || || || | | || || ||| Sbjct 93919 TTTTGGTAATCACCAACACGCTTCTCAAAGAAGTTTGTCTTTCCAGCAAGGGAGATGTTT 93978 Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATAt---ttttttttAAATCCTAATTCTGAA 39442 |||||||| || || || || || | || || || | ||| || | | Sbjct 93979 TCCATGAAGTCGAATGGGTTGGTGGAGTTGTAGAACTTCTGGTTA---CCGAGAGCGATG 94035 Query 39443 ATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATG 39502 | | ||| || |||||||| || |||||| ||||| | | ||||| || | | Sbjct 94036 AGGAGTCTGTCGGCAACAAACTCGATGTATTGCTTCATGAGAGTAGCGTTCATGCCGAGG 94095 Query 39503 AGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATT 39562 || | ||| ||||| || || | || |||| |||||| || || ||||| || || Sbjct 94096 AGACCACATGGAAGAGCATCAGTCAAGAATTCTTGTTCGATTTCAACAGCCTCGGTGATA 94155 Query 39563 ATCGATGTTACTACCT-CATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGC 39621 || | | |||| | || | || || || | | || || | | |||||| Sbjct 94156 ATGTCTTGGATGACCTTCTTCGATGGGCGGTTGTTA-AGGTGAGAGAAGAGGAGGCAGGC 94214 Query 39622 GAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGG 39681 || ||| || || |||||||| | | || ||||||||||| ||||| || || || Sbjct 94215 AAAATCAGTGTGCAGACCCTCATCACGAGAGATCAATTCGTTAGAGAATGTAAGACCCGG 94274 Query 39682 CATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCC 39741 ||| | ||| ||||| || | ||| || |||| |||||||| || || |||||||| || Sbjct 94275 CATCATACCGCGCTTCTTCAACCAGAAGATGGATGCAAAAGAACCCGAGAAGAAGATACC 94334 Query 39742 TTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATC---ATTATGTATCCA 39798 || || || ||||| ||||| || | | || ||| | || | || ||||| Sbjct 94335 CTCAACCGCAGCAAAAGCAACGAGACGTTGAGCGAAACAAGATTCTTGGTCTTGAATCCA 94394 Query 39799 CTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAG 39858 | |||||||| || ||||| | ||| || || || || || |||| || | Sbjct 94395 GTGAATGGCCCAATCGGCCTTCTTGCGGATACATGGGATGGTATCAATGGCATCGAACA- 94453 Query 39859 ATAATGTT-TTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTG 39917 | ||||| | | | || |||| ||||| || || | ||| || | |||| Sbjct 94454 AGTATGTTCTCTGCTTTGGCTCCTTAATGTATGTGTCGATGAGAAGAGAGTATGTCTCTG 94513 Query 39918 AATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTA 39977 | |||||||| || ||| ||||| || ||||| || |||| |||||| | | || | Sbjct 94514 AGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGTGCTTCTGGGACCTGAA 94573 Query 39978 CCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAA 40037 | || | | || | ||| |||| || |||||||| || ||||| ||||||||| | Sbjct 94574 CTTCACCAGAGAAACGTTCGACCAAGTTCTCATTCACAATACCATCTGAAGCGGCAAAGA 94633 Query 40038 ATGCCAATACATGTTTAATAAAATATTTTTCATCG----GGTGTCAATTTATTCCAGTCA 40093 | || | ||||| || || || |||||| | | | | || |||||||| Sbjct 94634 AGGCAAGAACATGGGAGATGAAGTAGCGCTCATCGTCATTGAGGCGA-TTGTTCCAGTCG 94692 Query 40094 TTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTG 40153 | | ||| ||||| | ||| | ||||| || ||||| || || || || ||||| ||| Sbjct 94693 TGAAGATCCTTTGACAGATCGATCTCTTCGGCAGTCCAGAATGAGGCTTCAGCCTTCTTG 94752 Query 40154 TACATGTTCCATAT 40167 ||||| | ||| || Sbjct 94753 TACATTTGCCAGAT 94766 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686902772375280