Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015-
05-13] 702 sequences; 27,513,354 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq43 116 3e-21
>seq43
Length=477585
Score = 116 bits (128), Expect = 3e-21
Identities = 363/549 (66%), Gaps = 21/549 (4%)
Strand=Plus/Plus
Query 19352 TTTTGCTTTATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGTAAAT 19411
||||||| ||||| || || ||| |||||| ||||| ||||| || || || | ||
Sbjct 216897 TTTTGCTGTATGGACCTCCAGGTACTGGAAAGACATTGATTGCTCGACAAATTGGGAAGA 216956
Query 19412 TACTTACAAAACAACCT--CCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGT 19469
| || ||| | | || || | | || |||||||| | |||| ||||||||
Sbjct 216957 TGCT--CAACGCCAGGGAACCGAAGGTCATCAACGGTCCTGAGGTGCTAAACAAATATGT 217014
Query 19470 AGGTCAATCGGAAGAAAATGTACG-ACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAAC 19528
|| || || |||||||| | || | | || ||||| || ||||| |||| | | ||
Sbjct 217015 TGGCCAGTCTGAAGAAAACATTCGTAAGCTT-TTTGCGGATGCTGA-GAAGGAGTACAAA 217072
Query 19529 GTTTAGGGCG-CAAAAGTTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGT 19587
| | |||| | | ||| || |||||||| || | || || || || ||| ||||
Sbjct 217073 GAGAAAGGCGACGAGAGTGGATTACACATTATCATCTTCGACGAGTTAGATGCAGTCTGC 217132
Query 19588 AAGCAAAGAGGTTCTGGTGTAAATGGAG-TACATG--------ACACTGTTGTCAATCAA 19638
||||| |||| ||| | || | |||| | ||| ||| |||||||||
Sbjct 217133 AAGCAGCGAGGCAGTGGAGCGGGAGGTGGTACAGGCGTTGGGGACAGTGTGGTCAATCAA 217192
Query 19639 CTCCTGTCAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACT 19698
|| ||||| || || || ||||| | ||||| || || || | ||||||| |||||
Sbjct 217193 CTACTGTCCAAGTTGGATGGTGTCGATCAACTCAACAACATCCTCCTTATTGGGATGACG 217252
Query 19699 AATAGACTGGAATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATC 19758
|| ||| |||| | ||||| ||||| | ||||| ||||| | ||| | | |
Sbjct 217253 AACAGAATGGATATGATAGATGATGCCTTGCTTCGACCAGGTCGTCTTGAAGTCCATTTA 217312
Query 19759 GAAATTAACT-TACCCGATGAATGTGGACGTGTGGAAATTTTAAACATACATACATCAAC 19817
|||| || || |||| ||||| ||| || | ||| | || || |||||| |
Sbjct 217313 GAAA-TATCTCTACCAGATGAGCATGGGCGCCAACAGATTCTCAAGATTCATACACAGAA 217371
Query 19818 CATGCGACAAAATAACCTTTTAAATGACGATGTAGATCTAGAAGAAATTGCAGCGGCT-A 19876
||| || | ||||| | | | |||||| ||||||| ||| |||| || | |
Sbjct 217372 GATGAGAGACAATAAAGTCATCGACACCGATGTTGATCTAGCTGAACTTGC-GCACTTGA 217430
Query 19877 CCAAAAACT 19885
|||||||||
Sbjct 217431 CCAAAAACT 217439
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397452599515510
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |