Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq43 116 3e-21 >seq43 Length=477585 Score = 116 bits (128), Expect = 3e-21 Identities = 363/549 (66%), Gaps = 21/549 (4%) Strand=Plus/Plus Query 19352 TTTTGCTTTATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGTAAAT 19411 ||||||| ||||| || || ||| |||||| ||||| ||||| || || || | || Sbjct 216897 TTTTGCTGTATGGACCTCCAGGTACTGGAAAGACATTGATTGCTCGACAAATTGGGAAGA 216956 Query 19412 TACTTACAAAACAACCT--CCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGT 19469 | || ||| | | || || | | || |||||||| | |||| |||||||| Sbjct 216957 TGCT--CAACGCCAGGGAACCGAAGGTCATCAACGGTCCTGAGGTGCTAAACAAATATGT 217014 Query 19470 AGGTCAATCGGAAGAAAATGTACG-ACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAAC 19528 || || || |||||||| | || | | || ||||| || ||||| |||| | | || Sbjct 217015 TGGCCAGTCTGAAGAAAACATTCGTAAGCTT-TTTGCGGATGCTGA-GAAGGAGTACAAA 217072 Query 19529 GTTTAGGGCG-CAAAAGTTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGT 19587 | | |||| | | ||| || |||||||| || | || || || || ||| |||| Sbjct 217073 GAGAAAGGCGACGAGAGTGGATTACACATTATCATCTTCGACGAGTTAGATGCAGTCTGC 217132 Query 19588 AAGCAAAGAGGTTCTGGTGTAAATGGAG-TACATG--------ACACTGTTGTCAATCAA 19638 ||||| |||| ||| | || | |||| | ||| ||| ||||||||| Sbjct 217133 AAGCAGCGAGGCAGTGGAGCGGGAGGTGGTACAGGCGTTGGGGACAGTGTGGTCAATCAA 217192 Query 19639 CTCCTGTCAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACT 19698 || ||||| || || || ||||| | ||||| || || || | ||||||| ||||| Sbjct 217193 CTACTGTCCAAGTTGGATGGTGTCGATCAACTCAACAACATCCTCCTTATTGGGATGACG 217252 Query 19699 AATAGACTGGAATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATC 19758 || ||| |||| | ||||| ||||| | ||||| ||||| | ||| | | | Sbjct 217253 AACAGAATGGATATGATAGATGATGCCTTGCTTCGACCAGGTCGTCTTGAAGTCCATTTA 217312 Query 19759 GAAATTAACT-TACCCGATGAATGTGGACGTGTGGAAATTTTAAACATACATACATCAAC 19817 |||| || || |||| ||||| ||| || | ||| | || || |||||| | Sbjct 217313 GAAA-TATCTCTACCAGATGAGCATGGGCGCCAACAGATTCTCAAGATTCATACACAGAA 217371 Query 19818 CATGCGACAAAATAACCTTTTAAATGACGATGTAGATCTAGAAGAAATTGCAGCGGCT-A 19876 ||| || | ||||| | | | |||||| ||||||| ||| |||| || | | Sbjct 217372 GATGAGAGACAATAAAGTCATCGACACCGATGTTGATCTAGCTGAACTTGC-GCACTTGA 217430 Query 19877 CCAAAAACT 19885 ||||||||| Sbjct 217431 CCAAAAACT 217439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397452599515510