Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq698 316 3e-81 seq689 138 1e-27 seq5 89.7 6e-13 >seq698 Length=89367 Score = 316 bits (350), Expect = 3e-81 Identities = 1135/1743 (65%), Gaps = 39/1743 (2%) Strand=Plus/Plus Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896 ||||| |||||||| || |||||||| || ||||||| | | ||||| || | Sbjct 1290 CGGAGATAGTACATTCCAGTCTTGAGACCGAGCTTCCATCCGGCGAAGTGCATGGAAGTG 1349 Query 117897 AACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 117956 | ||| | |||||| | |||| | ||||| ||| |||||||| ||||| Sbjct 1350 ATTTTGCCCATGGTTGGCTCCTTCATGTGAATGTTCAATGATTGAGATTGATCAATGAAA 1409 Query 117957 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTG----ATTTCCCACACAGT 118012 || || || || ||||| | || || || || | ||| |||||||| || || Sbjct 1410 GCACCGCGGTCAGCAGCCATTTGAA-CA-AT--TTGACGTTGGCTTATTTCCCAGACGGT 1465 Query 118013 CCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGC 118072 | |||| || ||| |||||| || |||| |||| ||| || || ||||| | Sbjct 1466 CTTGTATAGAGCCTTGATATCAGTAGGAATATTAGGAATATCTTGAATCGAACCACCAGA 1525 Query 118073 CTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCA- 118131 ||| || | |||||| | | |||||| ||||||| || ||||||| | Sbjct 1526 AGCGACAATTCTGTTCTTCATGTTATCTGACCATAGACCAAGGTTGACAAGATCCTTGAG 1585 Query 118132 CGAG-ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAGATATT 118189 | || ||| | |||| || ||||| || || | | ||| | ||| || || || Sbjct 1586 CAAGTATGGGT--TGACGACTTGGAACTCTCCAGCCAAGACGCGACG-AGAGTAAATGTT 1642 Query 118190 GGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGG 118249 | ||||||||||||||||||||||||||||| | || || | || || || || || Sbjct 1643 TGATGTGTATGGCTCAAAGCACTCATTGTTACCAAGAATCTGCGAGGTTGAAGCAGTAGG 1702 Query 118250 CATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTT-TTCCCTA-ATGCGTTCCTTGAGA 118307 ||| || || | | ||| ||| || | ||| | || | | || | ||||||| Sbjct 1703 CATTGGAGCAACCAAAAGAGAGTTGCGAATACCATGCTTGGCGATATCAG--CCTTGAGG 1760 Query 118308 GCGTCCCAGTCGTA--GTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATAC 118365 |||||||| | | | || ||| || | | |||||| ||| | || ||||| | Sbjct 1761 CTCTCCCAGTCCCAAAGATCAG--TTGGCTTGACATTCCACATGTCATATTGAAGGATGC 1818 Query 118366 CTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGG 118425 ||||||| |||| || ||| | ||||||| || | |||| | | || | | | Sbjct 1819 CTTGGGAAACTGGTGAACCCGCGTATGTCTCGTAGGTTCCCTGCTCTTGAGCAAGCTGGC 1878 Query 118426 AGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCA-TTGCCTTG 118484 || | | || || ||||| || || ||||| || ||| |||| ||| | | Sbjct 1879 AGGACATAGTTAAAGCAGCATGATAGATGGTCTCAAAGATCTGAGTGTTCAATTGACGAG 1938 Query 118485 GCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACA 118544 ||||| || ||||| | || || | | ||| |||| |||||||| |||||| Sbjct 1939 -CCTCGGGAGAGTCAAAAGGAAGACGTAATTTGAGGAATGCATCTGCGAGACCCTGGACA 1997 Query 118545 CCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTC-CACGGGATAAAA 118603 || || |||| ||| ||||| | |||||| ||| || || ||| ||| || ||| | Sbjct 1998 CCAAGACCAACTGGACGATGACGCATATTGCTCTTGCGTGCT-TCTGGCACTGGGTAATA 2056 Query 118604 ATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTT 118663 || |||||| ||| | || | ||| ||||| |||| || || || | Sbjct 2057 GTTGACATCGATGACCTTGTTCAAATTGCGAGTGACCACCTGGACGACCCGGTGGAGTTC 2116 Query 118664 TTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAG 118723 | |||| | || | | ||||| ||| | ||||| | || || || || Sbjct 2117 CCCAAAATCGTACTCGCCACTTCTTTCATCAACAAAGGCTGGAAGAGAGAGGGAAGCGAG 2176 Query 118724 ATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGA 118783 ||| || |||| | ||||| | |||||||||| |||||||| || |||||||| || Sbjct 2177 ATTGCAAACAGCGACTTCATCTGGAGCAGTGTACTCAATAATTTCGGTACACAAGTTAGA 2236 Query 118784 ACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAG 118843 ||||| || || ||||||||||||||||| |||| ||| || ||||||||||| || Sbjct 2237 GCTCTTGATAGTACCCAAGTTCTTTTGATTGCTCTTTCGGTTGCAGGCATCCTTGTAGAG 2296 Query 118844 CATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATCGGCAGC 118903 |||| |||| | || ||||| || || | || ||| ||||| | ||| | | ||| Sbjct 2297 CATGAATGGATTTCCAGTCTCGGTCTGTGCCTCGAGGATAGCGTACCAAAGCTTTTGAGC 2356 Query 118904 TGGCACAGTGGCGTTG-GCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACT 118962 | || || ||| | | |||||||||| ||||| || | || ||| | ||||| | Sbjct 2357 TTTCATGGT-TCGTCGACCACGCCCCTCTTGTTCGTATTTGGCATAAAGGACCTCAAATT 2415 Query 118963 CTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGAC 119022 | || || | | || | || ||||| |||| || |||||||| | || ||| | Sbjct 2416 CATCTCCATAGACGTCGGCTAGACCTGGAGCCTCATGAGGGCAGAACAAAGTCCACTCTT 2475 Query 119023 CACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCC 119082 | || ||||| || ||||| || || || || ||||| || || |||| || || | Sbjct 2476 GATTCTTTTCAACTCGTTTCATAAAAAGATCAGGAATCCAAAGAGCATAGAAAAGGTCAC 2535 Query 119083 GACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCG 119142 || || ||||||| | || || || || | || | || || | | |||| Sbjct 2536 GAGCTCGTACTTCTTCCTTGCCGTGGTTCTTGCGGAGGTCAAGGAATTCGAAAACGTCCG 2595 Query 119143 CGTGCCACGGTTCCAGGTACACCGCGATTG-ACC---CCTTACGACGACCAGCCTGGTTT 119198 |||||| || || ||||| | || | | ||| | | | | ||| |||||| Sbjct 2596 AGTGCCATGGCTCAAGGTAAATGGCAAAAGCACCTGGTCGTTTGTTG-CCACCCTGGTCA 2654 Query 119199 ACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCCA 119258 || || || |||||| ||| || || || ||||| |||| ||||| | ||| ||| Sbjct 2655 ACGTATCTAGCAGTGTTGTTGAACACGCGGAGCATGGGAACAATACCGTTGGAAGAACCA 2714 Query 119259 TTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATC-GTGGATGTGCATACCAATACC 119317 || ||||| | ||| ||| | |||||| || || ||| |||| | ||| ||||| Sbjct 2715 TTAGTCCCGCCAATGTAAGAGCCAGTGGCTC-GAATTCTGTGAATGTTGAGACCGATACC 2773 Query 119318 CCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGA 119377 || || ||| ||||| || || | | | | | | ||||| || ||||| Sbjct 2774 ACCGGCGGTCTTGGAGATCATGGCACAAGTCTTCAAAGTATCATAGATTCCTTCGATACT 2833 Query 119378 GTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTT 119437 ||| | || | |||| | |||||| ||||| |||||| || |||||||| || Sbjct 2834 GTCCTCTTTCATGTCGATCAAGAAGCATGAGGACATCTGAGGCTGAGGAGTACCAGCATT 2893 Query 119438 GAAGAGAGTTGGTGTCGCGTGGATGAACATACCTT--GGGACATCTTGTCGTAGGTCTCC 119495 ||| || ||||| | |||||| ||| || ||| |||| | |||||| ||| Sbjct 2894 GAAAAGGGTTGGGGAAGCGTGGGTGA--ATGTCTTCAACGACAAAAGCTTGTAGGTTTCC 2951 Query 119496 AAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGG 119555 ||||| |||||| || || ||||| | | || ||||| | ||||| ||| Sbjct 2952 AAGACACGTTCAATGTCATCACCCCAGATACCAACAGCAACACGCATCAGCATGTGTTGT 3011 Query 119556 GGT 119558 ||| Sbjct 3012 GGT 3014 >seq689 Length=208963 Score = 138 bits (152), Expect = 1e-27 Identities = 372/558 (67%), Gaps = 11/558 (2%) Strand=Plus/Plus Query 130015 GGCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 130074 |||||| || ||| |||||||| ||||| ||||| | ||| || ||||| ||||| Sbjct 94212 GGCAAAATCAGTGTGCAGACCCTCATCACGAGAGATCAATTCGTTAGAGAATGTAAGACC 94271 Query 130075 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 130134 ||||| | ||| ||||||||||||||||| || | ||| || || ||||||||||| Sbjct 94272 CGGCATCATACCGCGCTTCTTCAACCAGAAGATGGATGCAAAAGAACCCGAGAAGAAGAT 94331 Query 130135 CCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGT-ATCAA 130193 ||||| || || || |||| |||||| | ||| || | | ||| || | || Sbjct 94332 ACCCTCAACCGCAGCAAAAGCAACGAGACGTTGAGCGAAACA-AGATTCTTGGTCTTGAA 94390 Query 130194 ACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTC-A 130252 ||| | || ||||| | ||||| || |||||| |||| ||| | || || || | Sbjct 94391 TCCAGTGAATGGCCCAATCGGCCTTCTTGCGGATACATGGGATGGTATCAATGGCATCGA 94450 Query 130253 AAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTT 130312 | ||| |||| | || ||| || || ||||| | || ||||| || ||||| Sbjct 94451 ACAAGTATGTTCTCTGCT-TTGGCTCCTTAATGTATGTGTCGATGAGAAGAGAGTATGTC 94509 Query 130313 TCGCCATGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTAT 130371 || |||| | | ||| || | ||| | ||||||| | || ||||| | Sbjct 94510 TCTGAGTGGATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCATCGTGCTTCTGGGAC 94568 Query 130372 CTGTACCTCATCTGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGC 130431 ||| || ||| | | ||| | | |||||| ||||| ||||| || | || Sbjct 94569 CTGAACTTCACCAGAGAAACGTTCGACCAAGTTCTCATTCACAATACCATCTGAAGCGGC 94628 Query 130432 AAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCAGG---GTCTTCCA 130488 ||| || || || | || ||||| | | |||| || || ||| | ||||| Sbjct 94629 AAAGAAGGCAAGAACATGGGAGATGAAGTAGCGCTCATCGTCATTGAGGCGATTGTTCCA 94688 Query 130489 GTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA-ATTGCTCATTTGAGCCT 130547 ||||| ||||||||| || ||||| | ||| || |||||||| | || || ||||| Sbjct 94689 GTCGTGAAGATCCTTTGACAGATCGATCTCTTCGGCAGTCCAGAATG-AGGCTTCAGCCT 94747 Query 130548 TCTTATAGAGTTCCCAGA 130565 |||| || | || ||||| Sbjct 94748 TCTTGTACATTTGCCAGA 94765 >seq5 Length=68142 Score = 89.7 bits (98), Expect = 6e-13 Identities = 164/237 (69%), Gaps = 4/237 (2%) Strand=Plus/Minus Query 14233 CTTACCGACGGCGTCAATTTCATCGATGAAAACGATACATGGTTGATTTTCACGGGCAAC 14292 ||| |||| ||| ||||||||||| ||||||| |||||||||| | | | ||| ||| Sbjct 60975 CTTTCCGATGGCATCAATTTCATCAATGAAAATGATACATGGTGTACTCTTACGAGCATT 60916 Query 14293 TTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGG- 14351 | || | ||||| || | ||| || ||||| ||||||||||||||||| | | Sbjct 60915 GGCGAATAGGTCTCGTACGCGAGAGGCGCCAACACCGACAAACATCTCCACAAATTCAGA 60856 Query 14352 -CGGCGGAACATTGGATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGGAGG 14410 | || | ||| | || ||| || || ||| || || || |||| || || || Sbjct 60855 ACCGCTG-ACACT-GAAGAATGGTACTCCAGACTCTCCAGCTGTGGCCTTCGCTAGAAGA 60798 Query 14411 GTCTTCCCCGTCCCTGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACCA 14467 ||||| || || |||||| || | ||||| || || || || ||| | || ||| Sbjct 60797 GTCTTACCGGTTCCTGGTGGGCCAGAGAGAATCGCTCCTCGGGGAATCTTTGCCCCA 60741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618429773231120