Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq698 221 1e-52 seq689 125 8e-24 >seq698 Length=89367 Score = 221 bits (244), Expect = 1e-52 Identities = 848/1319 (64%), Gaps = 22/1319 (2%) Strand=Plus/Plus Query 78507 GAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTTGGTCGTGTACGGCTCGAAAGC-CT 78565 |||||| || |||| | || || ||| ||||| | ||||| ||||| ||||| || Sbjct 1607 GAACTCTCCAGCCAAGACGCGACGAGAGTAAATGTTTGATGTGTATGGCTC-AAAGCACT 1665 Query 78566 CGTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGGCATGGGTGCGACCAGTAGAGAAT 78625 | ||||| || | ||||| | ||| || || || ||||| || || |||| ||||| | Sbjct 1666 CATTGTTACCAAGAATCTGCGAGGTTGAAGCAGTAGGCATTGGAGCAACCAAAAGAGAGT 1725 Query 78626 TCCGAAGACCATGCGTCTTGATCTCGACCTTTAGGCC------GTCCCAAAATTCATTCG 78679 | |||| ||||||| | ||| || |||| |||| |||||||| ||| | | Sbjct 1726 TGCGAATACCATGCTTGGCGATATCAGCCTTGAGGCTCTCCCAGTCCCAAAGATCAGTTG 1785 Query 78680 CCGCGATCCCCCACATGTCCGGTTGAAGGATACCCTCGGACGCCGGCGACCCCTTGAACG 78739 | || ||||||||| ||||||||| || | ||| | || || ||| | | | Sbjct 1786 GCTTGACATTCCACATGTCATATTGAAGGATGCCTTGGGAAACTGGTGAACCCGCGTATG 1845 Query 78740 TCTCGTAAGATCCCTCCTCCTTGGCGAGTTCGCATGACTCGAGCAGGGCCGCGTGGTACA 78799 ||||||| | ||||| ||| | || || | ||| ||| | || || || || | Sbjct 1846 TCTCGTAGGTTCCCTGCTCTTGAGCAAGCTGGCAGGACATAGTTAAAGCAGCATGATAGA 1905 Query 78800 CAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCCTTGGTCTCGTCGAACGAAAGGCCGA 78859 | ||| ||||| |||| | | || |||| || ||| || | ||| | | Sbjct 1906 TGGTCTCAAAGATCTGAGTGTTCAATTGACGAGCCTCGGGAGAGTCAAAAGGAAGACGTA 1965 Query 78860 GCATCATGAAGACATCGGCCAGGCCCTGGACGCCGATAGCGATCGGTCGGTGGCGCATGT 78919 | | ||| |||| || || |||||||| || | | | | || || || ||||| | Sbjct 1966 ATTTGAGGAATGCATCTGCGAGACCCTGGACACCAAGACCAACTGGACGATGACGCATAT 2025 Query 78920 TGCTCTTTCGGGCCGCCTCGGTC-GGGTAAAAGTTCCGATCGATGACGCGGTTCAGGTTA 78978 ||||||| || || | | | | |||||| |||| ||||||||| ||||| || Sbjct 2026 TGCTCTTGCGTGCTTC-TGGCACTGGGTAATAGTTGACATCGATGACCTTGTTCAAATTG 2084 Query 78979 CGCGTGACGACCCGAGTCACCTCGTACAATTTGGCGAAATCAAAATG---ATTTCCTT-- 79033 || ||||| ||| | ||| || | || | ||||| | | | ||| || Sbjct 2085 CGAGTGACCACCTGGACGACCCGGTGGAGTTCCCCAAAATCGTACTCGCCACTTCTTTCA 2144 Query 79034 TGATGAAAGTC-GGTAGGCACAGCGATGCCAGGTTGCACACGGCCGTCTCGTCCGGGCTA 79092 | | |||| | || || | || || || || ||||| || || || || || | Sbjct 2145 TCAACAAAGGCTGGAAGAGAGAGGGAAGCGAGATTGCAAACAGCGACTTCATCTGGAGCA 2204 Query 79093 GAAACCTCGATGATTTCTGTGCACAAATTAGACGACTTGATGGTGCCGATGTTCTTCTGG 79152 | ||| || ||||| || ||||| ||||| |||||| || || | |||||| || Sbjct 2205 GTGTACTCAATAATTTCGGTACACAAGTTAGAGCTCTTGATAGTACCCAAGTTCTTTTGA 2264 Query 79153 TTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACATGTACGGCGTCCCGGTCTCAACCTGA 79212 |||||||| ||| ||||| ||||||||| |||| | || | || ||||| ||| Sbjct 2265 TTGCTCTTTCGGTTGCAGGCATCCTTGTAGAGCATGAATGGATTTCCAGTCTCGGTCTGT 2324 Query 79213 CTCTTGAGAACGCCGTCCCAGATGTCCCGGGCCCGGACAACCTTCTTGTACC--GACCCT 79270 || ||| | ||| ||| | | | || || ||| | ||| | |||| Sbjct 2325 GCCTCGAGGATAGCGTACCAAAGCTTTTGAGCTTT--CATGGTTCGTCGACCACGCCCCT 2382 Query 79271 GTGCGACGTACGTCCGGTACAACTCGTTGAAAGCCTCCCCATAGACATCGGGCAGGCCCG 79330 | |||| | || | | | || | || |||||||| |||| || || | Sbjct 2383 CTTGTTCGTATTTGGCATAAAGGACCTCAAATTCATCTCCATAGACGTCGGCTAGACCTG 2442 Query 79331 GGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGA 79390 | ||| || ||||| | || ||| || | | ||| ||||| | ||| || | Sbjct 2443 GAGCCTCATGAGGGCAGAACAAAGTCCACTCTTGATTCTTTTCAACTCGTTTCATAAAAA 2502 Query 79391 GGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGT 79450 | || || ||||| || || ||| ||||| || || | || || | ||| |||| Sbjct 2503 GATCAGGAATCCAAAGAGCATAGAAAAGGTCACGAGCTCGTACTTCTTCCTTGCCGTGGT 2562 Query 79451 TCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGA 79510 || || || || || || || | | ||| | |||||| ||||| || || ||||| | Sbjct 2563 TCTTGCGGAGGTCAAGGAATTCGAAAACGTCCGAGTGCCATGGCTCAAGGTAAATGGCAA 2622 Query 79511 ACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTC 79570 | | ||| || ||| ||| ||||||| ||||| | || ||||||||||| || | Sbjct 2623 AAGCACCTGGTCGTTTGTTGCCACCCTGGTCAACGTATCTAGCAGTGTTGTTGAACACGC 2682 Query 79571 GGAGCATGGGCACGATGCCGTCGGCGACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCG 79630 |||||||||| || || |||| || || || |||||| || | || | | Sbjct 2683 GGAGCATGGGAACAATACCGTTGGAAGAACCATTAGTCCCGCCAATGTAAGAGCCAGTGG 2742 Query 79631 CCCGAATGTTCGAGCA-GTGGATTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCAC 79689 | ||||| | | | | || || ||||| || |||| ||||||||| || || Sbjct 2743 CTCGAAT-TCTGTGAATGTTGAGACCGATACCACCGGCGGTCTTGGAGATCATGGCACAA 2801 Query 79690 TCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAG 79749 ||| | || || ||||| || ||||| ||| || ||||| ||| || |||||| Sbjct 2802 GTCTTCAAAGTATCATAGATTCCTTCGATACTGTCCTCTTTCATGTCGATCAAGAAGCAT 2861 Query 79750 CTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAA 79808 |||||||| || | ||||| || ||||| ||||| || | ||||| ||||| Sbjct 2862 GAGGACATCTGAGGCTGAGGAGTACCAGCATTGAAAAGGGTTGGGGAAGCGTGGGTGAA 2920 Score = 187 bits (206), Expect = 3e-42 Identities = 844/1322 (64%), Gaps = 28/1322 (2%) Strand=Plus/Minus Query 19196 TTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGAACAACCCGCAGATGTCGAGC 19255 ||||| ||||| | || ||||||||||| || ||||| | || |||||||| Sbjct 2920 TTCACCCACGCTTCCCCAACCCTTTTCAATGCTGGTACTCCTCAGCCTCAGATGTCCTCA 2861 Query 19256 TGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCATCTACGAGACGCTCAAGGAG 19315 || ||| | | | ||||| || ||||| || || || ||||| || || | ||| Sbjct 2860 TGCTTCTTGATCGACATGAAAGAGGACAGTATCGAAGGAATCTATGATACTTTGAAGACT 2801 Query 19316 TGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATCCAC-TGCTCGAATATCCGGTC 19374 || || ||||||||| |||| |||||||| || || | | | | || || | Sbjct 2800 TGTGCCATGATCTCCAAGACCGCCGGTGGTATCGGTCTCAACATTCACAGA-ATTCGAGC 2742 Query 19375 GAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCGACGGTATCGTCCCAATGCTCCG 19434 | ||| | || ||||| || || || ||||||| || || |||||||| Sbjct 2741 CACTGGCTCTTACATTGGCGGGACTAATGGTTCTTCCAACGGTATTGTTCCCATGCTCCG 2682 Query 19435 CGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGCGGCAAACG--CAAGGGCTCG 19492 ||| ||||||||||| || || ||||| ||||||| ||| |||||| || | ||| Sbjct 2681 CGTGTTCAACAACACTGCTAGATACGTTGACCAGGGTGGCAACAAACGACCAGGTGCT-- 2624 Query 19493 TTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGATTTCCTCGAACTGCGCCTG 19552 || ||||| ||||| |||||||||||| ||||||| | || ||||| || || ||| | Sbjct 2623 TTTGCCATTTACCTTGAGCCATGGCACTCGGACGTTTTCGAATTCCTTGACCTCCGCAAG 2564 Query 19553 AACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCACGGCCTTGTGGATTCCGGAC 19612 ||||| || | || || | || ||| ||||| ||| || | |||||||| || Sbjct 2563 AACCACGGCAAGGAAGAAGTACGAGCTCGTGACCTTTTCTATGCTCTTTGGATTCCTGAT 2504 Query 19613 CTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACCTGATGTGCCCGCACGAATGC 19672 || || ||| | ||||| ||| | |||| ||| || | ||||| || || Sbjct 2503 CTTTTTATGAAACGAGTTGAAAAGAATCAAGAGTGGACTTTGTTCTGCCCTCATGAGGCT 2444 Query 19673 CCTGGCCTACCCGACGTCTACGGCGAGGCGTTCAATGAGTTGTACCGGACTTACGTAGCC 19732 || || ||| |||||||||| || || | || | | | || | |||| | Sbjct 2443 CCAGGTCTAGCCGACGTCTATGGAGATGAATTTGAGGTCCTTTATGCCAAATACGAACAA 2384 Query 19733 CAGGGCC--GGTTCAAGAAGGTGGTCCGGGCCCGGGACGTCTGGGACCGCGTCCTCAAAA 19790 |||| | ||| | ||| | || | | | ||| || ||||| | Sbjct 2383 GAGGGGCGTGGTCGACGAA--CCATGAAAGCTCAAAAGCTTTGGTACGCTATCCTCGAGG 2326 Query 19791 GCCAGGTCGAGACCGGCACACCGTACATGTGCTACAAGGACGCCGCGAACGCCAAGTCAA 19850 ||| |||||| || | || | |||| ||||||||| ||| ||| ||| | Sbjct 2325 CACAGACCGAGACTGGAAATCCATTCATGCTCTACAAGGATGCCTGCAACCGAAAGAGCA 2266 Query 19851 ATCAGAAGAACATCGGCGCGATCAAGTCGTCCAACCTGTGTACTGAAATCATGGAGGTTT 19910 |||| |||||| | || | |||||| || ||| ||||||| ||||| || ||| Sbjct 2265 ATCAAAAGAACTTGGGTACTATCAAGAGCTCTAACTTGTGTACCGAAATTATTGAGTACA 2206 Query 19911 CCAAGCCGGACGAGACTGCCGTGTGTAATCTGGCGTCCCTGTGCCTGCCGACTTTCGT-- 19968 | || || || || || || ||||| || ||||| | || || | || || Sbjct 2205 CTGCTCCAGATGAAGTCGCTGTTTGCAATCTCGCTTCCCTCTCTCTTCCAGCCTTTGTTG 2146 Query 19969 ---CAAGGCCT-CCTCCTTCGACTTTGCCAAATTGTACGAGGTGACCCGGGTCGTCACGC 20024 ||| | | | ||| |||| || | || ||| || ||| ||||| | Sbjct 2145 ATGAAAGAAGTGGCGAGTACGATTTTGGGGAACTCCACCGGGTCGTCCAGGTGGTCACTC 2086 Query 20025 GTAATCTGAATCGCGTCATCGATCGGAACTTTTACCC-GACCGAGGCGGCGCGCAAGTCG 20083 | ||| |||| ||||||||| |||| |||||| | | | | || |||||| Sbjct 2085 GCAATTTGAACAAGGTCATCGATGTCAACTATTACCCAGTGCCA-GAAGCACGCAAGAGC 2027 Query 20084 AATATGCGCCACCGGCCGATCGCGATCGGCGTCCAGGGCCTGGCCGACGTTTTCATGATG 20143 |||||||| || || || | | | || |||||||| || || || | ||| | | Sbjct 2026 AATATGCGTCATCGTCCAGTTGGTCTTGGTGTCCAGGGTCTCGCAGATGCATTCCTCAAA 1967 Query 20144 CTCGGCCTCTCATTCGACGATCCCAAGGCGCGCGAGCTCAACAAGGGCATCTTCGAGGCC 20203 | | || | || ||| |||| |||| || | | |||| ||||| ||| || Sbjct 1966 TTACGTCTTCCTTTTGACTCTCCCGAGGCTCGTCAATTGAACACTCAGATCTTTGAGACC 1907 Query 20204 GTGTACCACGCGGCCCTCCTGGAATCGTGCGAACTCGCCAAAGAGGACGGCCCGTACGAG 20263 | || || || || | || ||| | || || ||||| | || | |||||| Sbjct 1906 ATCTATCATGCTGCTTTAACTATGTCCTGCCAGCTTGCTCAAGAGCAGGGAACCTACGAG 1847 Query 20264 ACGTTCAAGGGGTCGCCCGCGTCCGAGGGTATCCTCCAGCCGGACATGTGGGGCGTC--- 20320 || | | ||| || || | ||| | || ||||| || ||||||||| ||| Sbjct 1846 ACATACGCGGGTTCACCAGTTTCCCAAGGCATCCTTCAATATGACATGTGGAATGTCAAG 1787 Query 20321 ---ACTGA-GAATGAGTTTTGGAGCGCCCTCAAGGTTGAGATCAAGACCCACGGGCTTCG 20376 ||||| || | | |||| | |||||||| ||| ||| | || || |||| Sbjct 1786 CCAACTGATCTTTGGGACTGGGAGAG-CCTCAAGGCTGATATCGCCAAGCATGGTATTCG 1728 Query 20377 CAACTCGTTGCTCGTCGCGCCCATGCCGACCGCCTCGACCGCCCAGATCATGGGGAACAA 20436 |||||| | | || || || ||||| || || || ||| | ||||| | || ||||| Sbjct 1727 CAACTCTCTTTTGGTTGCTCCAATGCCTACTGCTTCAACCTCGCAGATTCTTGGTAACAA 1668 Query 20437 CGAG-GCTTTCGAGCCGTACACGACCAACATCTACTTGCGTCGTACACTGGCCGGTGAGT 20495 ||| ||||| ||||| ||||| | ||||| |||| ||||| |||| || |||| Sbjct 1667 TGAGTGCTTT-GAGCCATACACATCAAACATTTACTCTCGTCGCGTCTTGGCTGGAGAGT 1609 Query 20496 TC 20497 || Sbjct 1608 TC 1607 >seq689 Length=208963 Score = 125 bits (138), Expect = 8e-24 Identities = 540/828 (65%), Gaps = 38/828 (5%) Strand=Plus/Minus Query 59613 TCATTCTGGTCCGTCGAGGAGATTGACCTCGCCGGAGACCTGAAGGATTGGGACAAGC-- 59670 ||||||||| | | ||| ||||| || || | || || | || ||| |||| | Sbjct 94736 TCATTCTGGACTGCCGAAGAGATCGATCTGTCAAAGGATCTTCACGACTGGAACAATCGC 94677 Query 59671 -TCAATTACGACGAGCAGCATTTCATCAAGATGGTCCTGGCCTTCTTCGCGGCGAGTGAT 59729 ||||| |||| |||| | |||||| || || |||||||| || || ||| Sbjct 94676 CTCAATGACGATGAGCGCTACTTCATCTCCCATGTTCTTGCCTTCTTTGCCGCTTCAGAT 94617 Query 59730 GGAATTGTGATGGAAAATATAGACATGAACTTTTCCAAGG--ATGTCCAGATTGCCGAGG 59787 || ||||||| || || | | | |||| |||| || | || ||| | | || | Sbjct 94616 GGTATTGTGAATGAGAACTTGGTC--GAACGTTTCTCTGGTGAAGTTCAGGTCCCAGAAG 94559 Query 59788 CCCGGTCGTTCTACGCGTATCAGTCGTTCAACGAGTCTATCCACTCCGAGACGTACTCGC 59847 | || | ||||||| | ||| | | ||| |||||||| ||||| ||||| | Sbjct 94558 CACGATGCTTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCAGAGACATACTCTC 94499 Query 59848 TCATGATCGATAAGTTGGTCAAGGATCCGGA--AGAGAAGGCTGGTCTGTTCCGTGCCAT 59905 | | ||||| | | | ||||| || | |||||| | | ||||| |||||| Sbjct 94498 TTCTCATCGACACATACATTAAGGAGCCAAAGCAGAGAACA-TACT-TGTTCGATGCCAT 94441 Query 59906 AGAGACG-TCCCCCGCAGTTAAACAAAAAG-CAGAATGGGCCATGCAGTGGATG--AGTC 59961 || || |||| | | | ||| ||| | || |||||||| || ||||| || | Sbjct 94440 TGATACCATCCCATGTA--TCCGCAAGAAGGCCGATTGGGCCATTCACTGGATTCAAGAC 94383 Query 59962 CTGGAGCATCATTT-GCACAACGTCTCATAGCTTTTGCATGCG-TGGAAGGAATCTTCTT 60019 | || | ||| || ||||||||| | |||||||| |||| | || || |||||||| Sbjct 94382 CAAGAATCTTGTTTCGCTCAACGTCTCGTTGCTTTTGC-TGCGGTTGAGGGTATCTTCTT 94324 Query 60020 CTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAG 60079 ||| || || || | || |||||| | || ||||| || | |||||||| || | Sbjct 94323 CTCGGGTTCTTTTGCATCCATCTTCTGGTTGAAGAAGCGCGGTATGATGCCGGGTCTTAC 94264 Query 60080 TTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCATCAGGAGTTTGCAGTGAC-GC 60138 ||||| ||||| |||| || || || ||||| || || || ||||| || | | Sbjct 94263 ATTCTCTAACGAATTGATCTCTCGTGATGAGGGTCTGCACACTGATTTTGC-CTGCCTCC 94205 Query 60139 TCTATTCACACCTATTGGAAAAATGCCCTTCCAAG--GATATTCACAAGA-TTGTTCAGT 60195 ||| || |||| | | || |||| || ||| | | || ||||| | ||| Sbjct 94204 TCTTCTCTCACC---TTAACAACCGCCCATCGAAGAAGGTCATC-CAAGACATTATCACC 94149 Query 60196 G-GGCTTGTGAAGTGGAGAGCGAGTTCATCACAGAAGCGCTTCCATGCAAACTCATAGGT 60254 | |||| |||| | || || ||| | || || || |||||||| ||| | || Sbjct 94148 GAGGCTGTTGAAATCGAACAAGAATTCTTGACTGATGCTCTTCCATGTGGTCTCCTCGGC 94089 Query 60255 ATGGACGCTGGAGAAATGACGCAGTACATTCAGTTTGTCGCGGAC---CGCCTCATGGCC 60311 ||| ||||| |||| ||| ||||| ||||||| || ||| | |||||| || Sbjct 94088 ATGAACGCTACTCTCATGAAGCAATACATCGAGTTTGTTGCCGACAGACTCCTCATCGC- 94030 Query 60312 CAGTTTGGAGAAGGACCAATT-TACGGCGTGAATAACCCTTTCGACTGGATGGAGACCAT 60370 | | | || | | || ||| | | ||||| ||||||| ||||| | ||| Sbjct 94029 ---TCTCGGTAACCAGAAGTTCTACAACTCCACCAACCCATTCGACTTCATGGAAAACAT 93973 Query 60371 CTCGTTGGAAGGGAAGACCAACTTCTTTGAGAAGCGGGTCGGGGATTA 60418 ||| | | || ||||| ||||||||||||||||| || || ||||| Sbjct 93972 CTCCCTTGCTGGAAAGACAAACTTCTTTGAGAAGCGTGTTGGTGATTA 93925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548519986694880