Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq698 156 5e-33 >seq698 Length=89367 Score = 156 bits (172), Expect = 5e-33 Identities = 312/456 (68%), Gaps = 6/456 (1%) Strand=Plus/Minus Query 53273 TTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATGTCGAGC 53332 || || ||||| | |||||||| ||||| |||||||| ||| ||||||||||| Sbjct 2920 TTCACCCACGCTTCCCCAACCCTTTTCAATGCTGGTACTCCTCAGCCTCAGATGTCCTCA 2861 Query 53333 TGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTCAAGGAG 53392 |||||| || | | ||||| || ||| ||||| || ||||| || || | ||| Sbjct 2860 TGCTTCTTGATCGACATGAAAGAGGACAGTATCGAAGGAATCTATGATACTTTGAAGACT 2801 Query 53393 TGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCAC-TGCTC-GAACGTCCGTG 53450 |||||| ||||||||| | |||||||||||| || || | | | ||| | || | Sbjct 2800 TGTGCCATGATCTCCAAGACCGCCGGTGGTATCGGTCTCAACATTCACAGAA--TTCGAG 2743 Query 53451 CGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTATGCTCC 53510 | | ||| | || ||||| || || || | || || || || ||||||| Sbjct 2742 CCACTGGCTCTTACATTGGCGGGACTAATGGTTCTTCCAACGGTATTGTTCCCATGCTCC 2683 Query 53511 GCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCG-CAAGGGGTCG 53569 |||| ||||||||||| || | ||||| |||||||||| || || | ||| | | Sbjct 2682 GCGTGTTCAACAACACTGCTAGATACGTTGACCAGGGTGGCAACAAACGACCAGGTG-CT 2624 Query 53570 TTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTG 53629 || ||||| ||||| ||||| |||||| | ||| || | || || || || || || | Sbjct 2623 TTTGCCATTTACCTTGAGCCATGGCACTCGGACGTTTTCGAATTCCTTGACCTCCGCAAG 2564 Query 53630 AATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTTACAGCTCTGTGGATTCCGGAC 53689 || || || | ||||| | || |||||||| || ||||| |||||||| || Sbjct 2563 AACCACGGCAAGGAAGAAGTACGAGCTCGTGACCTTTTCTATGCTCTTTGGATTCCTGAT 2504 Query 53690 CTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGG 53725 || || ||| || || || ||| | | |||||| Sbjct 2503 CTTTTTATGAAACGAGTTGAAAAGAATCAAGAGTGG 2468 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547211198179600