Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015-
05-13] 702 sequences; 27,513,354 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq698 156 5e-33
>seq698
Length=89367
Score = 156 bits (172), Expect = 5e-33
Identities = 312/456 (68%), Gaps = 6/456 (1%)
Strand=Plus/Minus
Query 53273 TTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATGTCGAGC 53332
|| || ||||| | |||||||| ||||| |||||||| ||| |||||||||||
Sbjct 2920 TTCACCCACGCTTCCCCAACCCTTTTCAATGCTGGTACTCCTCAGCCTCAGATGTCCTCA 2861
Query 53333 TGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTCAAGGAG 53392
|||||| || | | ||||| || ||| ||||| || ||||| || || | |||
Sbjct 2860 TGCTTCTTGATCGACATGAAAGAGGACAGTATCGAAGGAATCTATGATACTTTGAAGACT 2801
Query 53393 TGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCAC-TGCTC-GAACGTCCGTG 53450
|||||| ||||||||| | |||||||||||| || || | | | ||| | || |
Sbjct 2800 TGTGCCATGATCTCCAAGACCGCCGGTGGTATCGGTCTCAACATTCACAGAA--TTCGAG 2743
Query 53451 CGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTATGCTCC 53510
| | ||| | || ||||| || || || | || || || || |||||||
Sbjct 2742 CCACTGGCTCTTACATTGGCGGGACTAATGGTTCTTCCAACGGTATTGTTCCCATGCTCC 2683
Query 53511 GCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCG-CAAGGGGTCG 53569
|||| ||||||||||| || | ||||| |||||||||| || || | ||| | |
Sbjct 2682 GCGTGTTCAACAACACTGCTAGATACGTTGACCAGGGTGGCAACAAACGACCAGGTG-CT 2624
Query 53570 TTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTG 53629
|| ||||| ||||| ||||| |||||| | ||| || | || || || || || || |
Sbjct 2623 TTTGCCATTTACCTTGAGCCATGGCACTCGGACGTTTTCGAATTCCTTGACCTCCGCAAG 2564
Query 53630 AATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTTACAGCTCTGTGGATTCCGGAC 53689
|| || || | ||||| | || |||||||| || ||||| |||||||| ||
Sbjct 2563 AACCACGGCAAGGAAGAAGTACGAGCTCGTGACCTTTTCTATGCTCTTTGGATTCCTGAT 2504
Query 53690 CTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGG 53725
|| || ||| || || || ||| | | ||||||
Sbjct 2503 CTTTTTATGAAACGAGTTGAAAAGAATCAAGAGTGG 2468
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547211198179600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |