Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq698 179 4e-40 seq96 163 3e-35 seq667 158 1e-33 seq623 129 7e-25 >seq698 Length=89367 Score = 179 bits (198), Expect = 4e-40 Identities = 1108/1751 (63%), Gaps = 77/1751 (4%) Strand=Plus/Plus Query 80038 GTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAA 80097 || || ||||||||||| || |||||||| || |||||| ||| | |||||| ||| Sbjct 1287 GTGCGGAGATAGTACATTCCAGTCTTGAGACCGAGCTTCCATCCGGCGAAGTGCATGGAA 1346 Query 80098 CTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGATG 80157 ||| || | | || || | || |||| ||||||| || ||||| ||| ||| Sbjct 1347 GTGATTTTGCCCATGGTTGGCTCCTTCATGTGAATGTTCAATGATTGAGATTGATCAATG 1406 Query 80158 AAAGCCCCACGATCTGCCGCCATTTCAATAATT-GACTTTTGTGGAATTTCCCATACTGT 80216 ||||| || || || || ||||||| || |||| ||| || | | ||||||| || || Sbjct 1407 AAAGCACCGCGGTCAGCAGCCATTTGAACAATTTGACGTTGGCTTA-TTTCCCAGACGGT 1465 Query 80217 ACGATACA---CCTTACGAAGCTCCTCTGGAATGTCCAGATT---TTGCACACTGCCACC 80270 || | |||| | || ||||| | || | ||| | ||||| Sbjct 1466 CTTGTATAGAGCCTTGATA---TCAGTAGGAATATTAGGAATATCTTGAATCGAACCACC 1522 Query 80271 GTCCTTTACAATTTGATTTTTCAATTCAGACGTCCAGACACCAAGCTTGTGCAGATCTTT 80330 |||||| || |||| | | | ||| | |||||| ||| ||||| || Sbjct 1523 AGAAGCGACAATTCTGTTCTTCATGTTATCTGACCATAGACCAAGGTTGACAAGATCCTT 1582 Query 80331 CACAAGGTGCTTGTTAATCATGACAAACTCTCCCGCGAGGGTGCGACGCAGA-TACAGGT 80389 | | || ||| | | |||||||| || | | |||||| ||| || | || Sbjct 1583 GAGCAAGTATGGGTTGACGACTTGGAACTCTCCAGCCAAGACGCGACG-AGAGTAAATGT 1641 Query 80390 TTGTAGTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCTCGCCGTCG 80449 ||| ||||| |||||||| ||| ||||| || || ||||| | || || || | Sbjct 1642 TTGATGTGTATGGCTCAAAGCACTCATTGTTACCAAGAATCTGCGAGGTTGAAGCAGTAG 1701 Query 80450 GCATCGGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATATC---CTCGCGCA 80506 |||| || | ||||| || || || || | || ||||| |||||| || | | Sbjct 1702 GCATTGGAGCAACCAAAAGAGAGTTGCGAATACCATGCTTGGCGATATCAGCCTTGAGGC 1761 Query 80507 AATCTGA---CCAAAAATCAACCCCAACGCTGTGACC--CCACATGTCGTGCTGCAAGAT 80561 || | ||||| |||| ||| |||| ||||||||| | || | ||| Sbjct 1762 TCTCCCAGTCCCAAAGATCAGTTG----GCT-TGACATTCCACATGTCATATTGAAGGAT 1816 Query 80562 GCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTG-GCCAGCT 80620 ||| | || | || || |||||| | |||||||| | |||| | ||||| || |||| Sbjct 1817 GCCTTGGGAAACTGGTGAACCCGCGTATGTCTCGTAGGTTCCCTGC-TCTTGAGCAAGCT 1875 Query 80621 CACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTCACACCGC 80680 || ||| | | || || ||||| ||| |||||||| |||||| | Sbjct 1876 GGCAGGACATAGTTAAAGCAGCATGATAGATGGTCTCAAAGATCTGAGTGTTCAATTGAC 1935 Query 80681 GCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAGGCCCTGAA 80740 | |||| || ||| || | | | | | | ||| | || || || ||||| | Sbjct 1936 GAGCCTCGGGAGAGTCAAAAGGAAGACGTAATTTGAGGAATGCATCTGCGAGACCCTGGA 1995 Query 80741 CGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCTCG-GCCTCCGGAATTGGGTAA 80799 | || | | | || || || ||| | || | || || || || || | ||||||| Sbjct 1996 CACCAAGACCAACTGGACGATGACGCATATT-GCTCTTGCGTGCTTCTGGCACTGGGTAA 2054 Query 80800 AAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACATCATGAAGT 80859 |||| ||||||||| ||||| ||||| || || ||| | || || ||| Sbjct 2055 TAGTTGACATCGATGACCTTGTTCAAATTGCGAGTGACCACCTGGACGACCCGGTGGAGT 2114 Query 80860 TTCTGAAAGTCGAATTGGTTCCCCTTC--------ACAAATGCCGGAAGGCTCAGGGACG 80911 | | ||| ||| | | | || |||| ||||| || ||||| ||||| | Sbjct 2115 TCCCCAAAATCGTACTCG--CCACTTCTTTCATCAACAAAGGCTGGAAGAGAGAGGGAAG 2172 Query 80912 CCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCACAAAT 80971 | |||||||| || || || || || | | | || |||| | ||||| || ||||| | Sbjct 2173 CGAGATTGCAAACAGCGACTTCATCTGGAGCAGTGTACTCAATAATTTCGGTACACAAGT 2232 Query 80972 TAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCCTTGT 81031 |||| ||| || ||||||| ||| || || || ||| |||||| || ||||||| Sbjct 2233 TAGAGCTCTTGATAGTACCCAAGTTCTTTTGATTGCTCTTTCGGTTGCAGGCATCCTTGT 2292 Query 81032 AGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAATCTCGC 81091 || |||| | || | || |||||| ||||| || |||||| |||| ||||| || Sbjct 2293 AGAGCATGAATGGATTTCCAGTCTCGGTCTGTGCCTCGAGGATAGCGTACCAAAGCTTTT 2352 Query 81092 GCGCCTTGA--------CCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTAAGC 81143 | || || | | ||| || ||| |||| || ||||| ||| Sbjct 2353 GAGCTTTCATGGTTCGTCGACCACGCCCCTCTTG--TTCG------TATTTGGCATAAAG 2404 Query 81144 TTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAG 81203 | || || | | || | | || | || |||| ||| | |||||| | || Sbjct 2405 GACCTCAAATTCATCTCCATAGACGTCGGCTAGACCTGGAGCCTCATGAGGGCAGAACAA 2464 Query 81204 GTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGT 81263 ||| || | || || || ||||| ||| ||||| ||||| || || Sbjct 2465 AGTCCACTCTTGATTCTTTTCAACTCGTTTCATAAAAAGATCAGGAATCCAAAGAGCATA 2524 Query 81264 GAACAGGTCGCGGCAGCGCG--CCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAG 81321 ||| ||||| || ||| || | || || | || ||||| ||| | || || || Sbjct 2525 GAAAAGGTCACG--AGCTCGTACTTCTTCCTTGCCGTGGTTCTTGCGGAGGTCAAGGAAT 2582 Query 81322 TCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTG-CGACGG-- 81378 || | | ||||| ||||||||||| || || | ||| | | | ||| | || | Sbjct 2583 TCGAAAACGTCCGAGTGCCATGGCTCAAGGTAAATGGCAAAAG-CACCTGGTCGTTTGTT 2641 Query 81379 -CCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACC 81437 |||||||||| ||||| | ||||| ||| || || || | ||| || | ||||| Sbjct 2642 GCCACCCTGGTCAACGTATCTAGCAGTGTTGTTGAACACGCGGAGCATGGGAACAATACC 2701 Query 81438 ATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCTTGCTGATTGA 81497 | || ||| || || || | || || || |||| || | || ||| || Sbjct 2702 GTTGGAAGAACCATTAGTCCCGCCAATGTAAGAGCCAGTGGCTCGAATTCTG-TGAATGT 2760 Query 81498 A-AGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAA 81556 |||||||| ||||| | ||| || ||| ||||| |||| || ||||| | Sbjct 2761 TGAGACCGATACCACCGGCGGTCTTGGAGATCATGGCACAAGTCTTCAAAGTATCATAGA 2820 Query 81557 TTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTT 81616 |||| ||||| || || | ||||||||| | |||||| || ||||||||||| | Sbjct 2821 TTCCTTCGATACTGTCCTCTTTCATGTCGATCAAGAAGCATGAGGACATCTGAGG--CTG 2878 Query 81617 TTGAG--CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTT---TGACAT 81671 ||| || |||||||| || ||||||| ||||| || ||| | || |||| Sbjct 2879 AGGAGTACCAGCATTGAAAAGGGTTGGGGAAGCGTGGGTG-AATGTC--TTCAACGACAA 2935 Query 81672 CAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACG 81731 || | ||||||||| ||| ||| ||| || ||||| ||||| | ||| ||||| Sbjct 2936 AAGCTTGTAGGTTTCCAAGACACGTTCAATGTCATCACCCCAGATACCAACAGCAACACG 2995 Query 81732 CATAAACATGT 81742 ||| | ||||| Sbjct 2996 CATCAGCATGT 3006 >seq96 Length=163266 Score = 163 bits (180), Expect = 3e-35 Identities = 174/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || ||||||||||| |||||||| || || || ||||| || || |||||||| || || Sbjct 52637 ATCATGCAAATCTTCGTCAAGACCCTCACGGGTAAGACGATCACCCTTGAGGTGGAATCG 52696 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 |||| ||| | ||| | ||| | || || ||||| |||||||| || || || ||| Sbjct 52697 TCCGATACCATCGACAATGTCAAGTCCAAGATCCAGGATAAGGAGGGCATCCCACCTGAC 52756 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 || || ||||| || || || || ||||||||||| || | |||||| | | || || Sbjct 52757 CAACAACGTCTGATCTTCGCCGGCAAGCAACTCGAAGACGGTCGTACTTTGTCCGATTAC 52816 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || |||| ||||||||||| ||||| || ||| | |||||||| ||||| Sbjct 52817 AACATCCAGAAGGAATCCACCCTTCACCTTGTCCTCCGTCTTCGAGGTGG 52866 >seq667 Length=237617 Score = 158 bits (174), Expect = 1e-33 Identities = 164/215 (76%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 27418 GTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCA 27477 |||||||| ||||| |||||||| || || |||||||| ||||| |||| ||| | Sbjct 144036 GTCAAGACTCTTACTGGCAAGACCATCACCCTTGAGGTCGAGTCTTCAGATACCATCGAC 143977 Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537 || | ||| | || || |||||||||||||| || || || || || || ||||| ||| Sbjct 143976 AACGTCAAGTCAAAGATCCAGGACAAGGAGGGTATCCCACCCGATCAACAACGTCTCATT 143917 Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597 || ||||| |||||| | ||||||| ||||| || |||| || || |||| |||||| Sbjct 143916 TTCGCTGGCAAGCAATTGGAGGATGGCCGTACTCTCTCAGATTACAACATCCAGAAGGAA 143857 Query 27598 TCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || || ||||| || ||| | ||||| || ||||| Sbjct 143856 TCTACCCTTCACCTTGTCCTTCGTCTCCGTGGTGG 143822 Score = 145 bits (160), Expect = 9e-30 Identities = 156/204 (76%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 ||||| ||||| || ||||||||||| || || |||| || | ||| | ||| | Sbjct 144308 ACCGGAAAGACCATCACTCTTGAGGTCGAATCTTCCGATACTATCGACAATGTCAAGTCC 144249 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || ||||||||||||||||| |||||||| ||||| || ||||| || ||||| || || Sbjct 144248 AAGATTCAGGACAAGGAGGGCATTCCTCCCGACCAACAACGTCTGATCTTTGCCGGCAAA 144189 Query 27550 CAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAAAGGAATCCACTCTTCA 27608 |||||||| |||| ||| || || ||| || || || | || ||||| || ||||| || Sbjct 144188 CAACTCGAAGATGGTCGCACTCTGAGC-GATTACAACATTCAGAAGGAGTCTACTCTCCA 144130 Query 27609 TCTAGTCTTGCGTCTTCGCGGTGG 27632 ||| ||| | || ||||| ||||| Sbjct 144129 TCTTGTCCTCCGCCTTCGTGGTGG 144106 Score = 129 bits (142), Expect = 7e-25 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||||||||| ||||| | || ||||| || || || || || ||||||||| Sbjct 143593 AATGCAAATCTTTGTGAAGACTTTGACGGGCAAAACAATCACACTGGAAGTTGAGTCATC 143534 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | |||| || |||| | || || ||||||||||| |||||||| ||||| || Sbjct 143533 AGACACAATTGACAACGTGAAATCCAAGATCCAGGACAAGGAAGGAATTCCACCAGATCA 143474 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||| || || || || || ||||| ||| | || |||| || || | |||| || || Sbjct 143473 GCAACGCCTGATCTTCGCAGGTAAACAATTGGAAGATGGCCGAACTTTGTCAGATTACAA 143414 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 | | |||||||| |||||| || | || ||| | | || ||||| || Sbjct 143413 TATTCAAAAGGAGAGCACTCTCCACTTGGTGTTGAGATTACGTGGTGGTCA 143363 >seq623 Length=266034 Score = 129 bits (142), Expect = 7e-25 Identities = 140/183 (77%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 ||| |||||||| || || || || || || ||||||||||| || ||| |||| ||| Sbjct 249526 CTTCGTCAAGACCCTCACGGGTAAAACCATCACTCTTGAGGTGGAATCATCCGATACCAT 249585 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 | ||| | ||| | || ||||| |||||||| |||||||| || ||||| || ||||| Sbjct 249586 CGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGAATTCCACCCGACCAACAACGTCT 249645 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAA 27592 ||||| || || |||||||| ||||||| || || | ||| ||||| || |||||| Sbjct 249646 GATTTTCGCCGGCAAGCAACTTGAGGATGGCCGCACTTTGAGC-GACTACAACATCCAAA 249704 Query 27593 AGG 27595 ||| Sbjct 249705 AGG 249707 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570305395526240