Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq667 140 2e-28 >seq667 Length=237617 Score = 140 bits (154), Expect = 2e-28 Identities = 161/214 (75%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 34494 CAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTC 34553 ||||||||| ||||||||||||||||||||||| || |||||||| | ||||| | || Sbjct 143380 CAACACCAAGTGGAGAGTGCTCTCCTTTTGAATATTGTAATCTGACAAAGTTCGGCCATC 143439 Query 34554 TTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTC 34613 ||| | ||||||||| || || || | || || || || || || | ||| |||||||| Sbjct 143440 TTCCAATTGTTTACCTGCGAAGATCAGGCGTTGCTGATCTGGTGGAATTCCTTCCTTGTC 143499 Query 34614 TGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCG 34672 |||| || | ||| ||| | |||||||||| ||| ||||||| || || | Sbjct 143500 CTGGATC-TTGGATTTCACGTTGTCAATTGTGTCTGATGACTCAACTTCCAGTGTGATTG 143558 Query 34673 TTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| || || || || |||||||| || ||||| Sbjct 143559 TTTTGCCCGTCAAAGTCTTCACAAAGATTTGCAT 143592 Score = 136 bits (150), Expect = 2e-27 Identities = 154/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 ||||| ||||||||||| |||||||| |||||||| | ||||| | ||||| ||||| Sbjct 143618 TGGAGTGTGCTCTCCTTCTGAATGTTGTAATCTGACAAAGTTCGGCCATCTTCCAGTTGC 143677 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 || || ||||| || | || || || || || || | |||||||| ||| |||| || Sbjct 143678 TTTCCAGCAAAGATCAGGCGTTGCTGATCTGGTGGAATCCCCTCCTTATCTTGGATC-TT 143736 Query 34624 TGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 | ||| ||| || ||| |||||| ||| ||||||| || ||||| || ||||| Sbjct 143737 GGATTTCACGTTATCAATCGTGTCTGATGACTCGACTTCCAATGTGATCGTCTTTCCGGT 143796 Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706 ||||| |||||||| |||||||| Sbjct 143797 CAACGTCTTCACAAAGATCTGCAT 143820 Score = 89.7 bits (98), Expect = 3e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | ||| || | || | ||||||||| |||||| |||||||| ||||| Sbjct 144106 CCACCACGAAGGCGGAGGACAAGATGGAGAGTAGACTCCTTCTGAATGTTGTAATCGCTC 144165 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | ||||| |||||||| |||||||| || | ||| |||||||| || || Sbjct 144166 AGAGTGCGACCATCTTCGAGTTGTTTGCCGGCAAAGATCAGACGTTGTTGGTCGGGAGGA 144225 Query 34600 ACTCCCTCCTTGTC 34613 | ||||||||||| Sbjct 144226 ATGCCCTCCTTGTC 144239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314726907291566