Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015-
05-13] 702 sequences; 27,513,354 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq667 120 3e-22
seq96 118 9e-22
seq623 93.3 4e-14
>seq667
Length=237617
Score = 120 bits (132), Expect = 3e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || ||||| || ||| |||| ||||| | || || || ||||| || | ||
Sbjct 143592 ATGCAAATCTTTGTGAAGACTTTGACGGGCAAAACAATCACACTGGAAGTTGAGTCATCA 143533
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || ||| || || || ||||| ||||| || ||||| |||||
Sbjct 143532 GACACAATTGACAACGTGAAATCCAAGATCCAGGACAAGGAAGGAATTCCACCAGATCAG 143473
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTT-TCCGATTACAA 27166
|| || | || | ||| || |||||||||||||| | ||| | || || ||||||||
Sbjct 143472 CAACGCCTGATCTTCGCAGGTAAACAATTGGAAGATGGC-CGAACTTTGTCAGATTACAA 143414
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|||||||||||| || | || ||||| ||| | || || |||||
Sbjct 143413 TATTCAAAAGGAGAGCACTCTCCACTTGGTGTTGAGATTACGTGGTGG 143366
Score = 105 bits (116), Expect = 6e-18
Identities = 147/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 27012 ACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAA 27071
||||| ||| | || |||||||| || ||| | ||||| | || || | |||||
Sbjct 144308 ACCGGAAAGACCATCACTCTTGAGGTCGAATCTTCCGATACTATCGACAATGTCAAGTCC 144249
Query 27072 AAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAA 27131
|| ||||| ||||| || ||||| || ||||| ||||| ||| | || | |||||||||
Sbjct 144248 AAGATTCAGGACAAGGAGGGCATTCCTCCCGACCAACAACGTCTGATCTTTGCCGGCAAA 144189
Query 27132 CAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACAT 27191
||| | ||||| || || | ||||||||||||||| |||||||| || | |||
Sbjct 144188 CAACTCGAAGATGGTCGCACTCTGAGCGATTACAACATTCAGAAGGAGTCTACTCTCCAT 144129
Query 27192 TTGGTTTTGCGTTTGCGGGGTGGCAT 27217
| || | || | || ||||| ||
Sbjct 144128 CTTGTCCTCCGCCTTCGTGGTGGTAT 144103
Score = 102 bits (112), Expect = 7e-17
Identities = 165/237 (70%), Gaps = 4/237 (2%)
Strand=Plus/Minus
Query 26981 ATACGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGA 27040
|||| | |||||| | || || ||||| || |||||| | || || ||||| || ||
Sbjct 144051 ATACCCTATGCAG----TCGTCAAGACTCTTACTGGCAAGACCATCACCCTTGAGGTCGA 143996
Query 27041 ACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACC 27100
| || || | || || | ||||| ||| || || ||||| || || || |||||
Sbjct 143995 GTCTTCAGATACCATCGACAACGTCAAGTCAAAGATCCAGGACAAGGAGGGTATCCCACC 143936
Query 27101 CGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGA 27160
||||||||| ||| | || | ||| ||||| |||||||| || | || | || ||
Sbjct 143935 CGATCAACAACGTCTCATTTTCGCTGGCAAGCAATTGGAGGATGGCCGTACTCTCTCAGA 143876
Query 27161 TTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||||||| || ||||| || ||| | || | || | ||| | || ||||| ||
Sbjct 143875 TTACAACATCCAGAAGGAATCTACCCTTCACCTTGTCCTTCGTCTCCGTGGTGGTAT 143819
Score = 98.7 bits (108), Expect = 9e-16
Identities = 139/193 (72%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || || ||||||| ||| | || || | ||||| || | ||
Sbjct 143820 ATGCAGATCTTTGTGAAGACGTTGACCGGAAAGACGATCACATTGGAAGTCGAGTCATCA 143761
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| ||||||| | || ||| || || ||||| || || || || ||||| |||||
Sbjct 143760 GACACGATTGATAACGTGAAATCCAAGATCCAAGATAAGGAGGGGATTCCACCAGATCAG 143701
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTT-TCCGATTACAA 27166
|| || | || | || || || ||| ||||||| | ||| | || || ||||||||
Sbjct 143700 CAACGCCTGATCTTTGCTGGAAAGCAACTGGAAGATGGC-CGAACTTTGTCAGATTACAA 143642
Query 27167 CATTCAAAAGGAG 27179
|||||| ||||||
Sbjct 143641 CATTCAGAAGGAG 143629
>seq96
Length=163266
Score = 118 bits (130), Expect = 9e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
|||||| || || || || || || || || ||| | || || ||||| |||||| ||||
Sbjct 52639 CATGCAAATCTTCGTCAAGACCCTCACGGGTAAGACGATCACCCTTGAGGTGGAATCGTC 52698
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| | || || | ||||| || || || || || || ||||| ||||| || ||
Sbjct 52699 CGATACCATCGACAATGTCAAGTCCAAGATCCAGGATAAGGAGGGCATCCCACCTGACCA 52758
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| ||| | || | ||||||||| ||| | |||||| || || | |||||||||||
Sbjct 52759 ACAACGTCTGATCTTCGCCGGCAAGCAACTCGAAGACGGTCGTACTTTGTCCGATTACAA 52818
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
||| || ||||| || ||| | || | || | ||| | || |||||
Sbjct 52819 CATCCAGAAGGAATCCACCCTTCACCTTGTCCTCCGTCTTCGAGGTGG 52866
>seq623
Length=266034
Score = 93.3 bits (102), Expect = 4e-14
Identities = 129/181 (71%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 26997 TTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATT 27056
|| || || || || || || || | || |||||||| |||||| | ||||| | ||
Sbjct 249527 TTCGTCAAGACCCTCACGGGTAAAACCATCACTCTTGAGGTGGAATCATCCGATACCATC 249586
Query 27057 GAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTA 27116
|| | ||||| || ||||||||||| ||||| || |||||||| ||||| ||| |
Sbjct 249587 GACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGAATTCCACCCGACCAACAACGTCTG 249646
Query 27117 ATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAG 27176
|| | ||||||||| ||| | || || | || | ||| |||||||| ||||||
Sbjct 249647 ATTTTCGCCGGCAAGCAACTTGAGGATGGCCGCACTTTGAGCGACTACAACATCCAAAAG 249706
Query 27177 G 27177
|
Sbjct 249707 G 249707
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434914583591040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |